Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D14
         (157 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    19   3.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       19   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   4.5  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    18   7.9  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 82  IYSPCWAAKRPQRAADVEK 138
           +Y PCW A  P+    +EK
Sbjct: 381 VYIPCWNA-TPEIITYLEK 398


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 118 RAADVEKILSSV 153
           RAAD++  LSS+
Sbjct: 278 RAADIQPTLSSI 289


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 44  CLSDLKNAL 70
           C+S LKNAL
Sbjct: 469 CVSQLKNAL 477


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -1

Query: 130 HQQHAGDALPPNTASKYA 77
           H Q+ G   PP+ + ++A
Sbjct: 351 HHQNFGPRHPPDCSMEFA 368


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,249
Number of Sequences: 336
Number of extensions: 433
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used:  2124827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)