Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D14
(157 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 34 0.097
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 34 0.097
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 34 0.097
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 34 0.097
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 34 0.097
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 34 0.097
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 34 0.097
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 34 0.097
AF011843-1|AAD01477.1| 273|Homo sapiens MHC class I chain-relat... 28 4.8
Y18118-1|CAA77037.1| 274|Homo sapiens MICA protein. 28 6.4
Y18110-1|CAA77029.1| 274|Homo sapiens MICA protein. 28 6.4
U69627-1|AAB51783.1| 181|Homo sapiens PERB11.1 protein protein. 28 6.4
U56951-1|AAB41071.1| 274|Homo sapiens MHC class I chain-related... 28 6.4
AF336082-1|AAK20899.1| 359|Homo sapiens MHC class I chain-relat... 28 6.4
AF106649-1|AAD19603.1| 273|Homo sapiens MHC class I chain-relat... 28 6.4
AB088108-1|BAC54940.1| 359|Homo sapiens MHC class I polypeptide... 28 6.4
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 63 MRYVAAYLLAVLGGKASPA 119
MRYVA+YLLA LGG +SP+
Sbjct: 1 MRYVASYLLAALGGNSSPS 19
>AF011843-1|AAD01477.1| 273|Homo sapiens MHC class I chain-related
protein A protein.
Length = 273
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 151 KTKTLYHAMHADCLQELRRYLKSSVVLRR 179
>Y18118-1|CAA77037.1| 274|Homo sapiens MICA protein.
Length = 274
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 152 KTKTLYHAMHADCLQELRRYLKSGVVLRR 180
>Y18110-1|CAA77029.1| 274|Homo sapiens MICA protein.
Length = 274
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 152 KTKTLYHAMHADCLQELRRYLKSGVVLRR 180
>U69627-1|AAB51783.1| 181|Homo sapiens PERB11.1 protein protein.
Length = 181
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 152 KTKTLYHAMHADCLQELRRYLKSGVVLRR 180
>U56951-1|AAB41071.1| 274|Homo sapiens MHC class I chain-related
protein A protein.
Length = 274
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 152 KTKTLYHAMHADCLQELRRYLKSGVVLRR 180
>AF336082-1|AAK20899.1| 359|Homo sapiens MHC class I chain-related
protein A protein.
Length = 359
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 151 KTKTLYHAMHADCLQELRRYLKSGVVLRR 179
>AF106649-1|AAD19603.1| 273|Homo sapiens MHC class I chain-related
A antigen protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 151 KTKTLYHAMHADCLQELRRYLKSGVVLRR 179
>AB088108-1|BAC54940.1| 359|Homo sapiens MHC class I
polypeptide-related sequence A protein.
Length = 359
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ETNILFSAIHVSCLSDLKNALRGRVFTRR 94
+T L+ A+H CL +L+ L+ V RR
Sbjct: 151 KTKTLYHAMHADCLQELRRYLKSGVVLRR 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,783,037
Number of Sequences: 237096
Number of extensions: 294270
Number of successful extensions: 651
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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