Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D14
         (157 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    39   0.001
X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    39   0.001
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    39   0.001
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    39   0.001
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    39   0.001
AE014134-2359|AAF53310.1|  417|Drosophila melanogaster CG16850-P...    27   3.5  

>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 63  MRYVAAYLLAVLGGKASPA 119
           MRYVAAYLLAVLGGK SPA
Sbjct: 1   MRYVAAYLLAVLGGKDSPA 19


>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 63  MRYVAAYLLAVLGGKASPA 119
           MRYVAAYLLAVLGGK SPA
Sbjct: 1   MRYVAAYLLAVLGGKDSPA 19


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 63  MRYVAAYLLAVLGGKASPA 119
           MRYVAAYLLAVLGGK SPA
Sbjct: 1   MRYVAAYLLAVLGGKDSPA 19


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 63  MRYVAAYLLAVLGGKASPA 119
           MRYVAAYLLAVLGGK SPA
Sbjct: 1   MRYVAAYLLAVLGGKDSPA 19


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 38.7 bits (86), Expect = 0.001
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 63  MRYVAAYLLAVLGGKASPA 119
           MRYVAAYLLAVLGGK SPA
Sbjct: 1   MRYVAAYLLAVLGGKDSPA 19


>AE014134-2359|AAF53310.1|  417|Drosophila melanogaster CG16850-PA
           protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -3

Query: 155 PTELRIFSTSAARWGRFAAQHGE*IRGHVTHFLSR*DTIRVLPKTKCSSP 6
           PT   + STSAA     AA+    + G    F+   D I V P T  +SP
Sbjct: 219 PTSPPLASTSAAAAAAMAAEAEAELAGAGAMFVPHHDAIIVTPATPMASP 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,105,694
Number of Sequences: 53049
Number of extensions: 94421
Number of successful extensions: 145
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 24,988,368
effective HSP length: 32
effective length of database: 23,290,800
effective search space used: 442525200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)