Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D14
         (157 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   1.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   5.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    19   7.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    19   7.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   7.4  

>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +2

Query: 17  ILFSAIHVSCLSDLKNALRGRVF-TRRVGRQSV-PSVLLMSKRSSAL 151
           IL + +H SC S  K    G ++  R++  +++ P   LM      L
Sbjct: 9   ILIAIVHASCASVPKVVYDGPIYELRQIEEENIEPDTELMDSNEPLL 55


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 97  WAAKRPQRAADVEK 138
           WAA +  +A D+E+
Sbjct: 37  WAALKKMKAGDMEQ 50


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 11  TNILFSAIHVSCLSDLKN 64
           +++ F    VSCL +L+N
Sbjct: 392 SSVEFDWCAVSCLRELRN 409


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = +1

Query: 94  CWAAKRPQRAADVE 135
           CW   RP +  ++E
Sbjct: 326 CWNENRPLKRRNIE 339


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 121 HAGDALPPNTASKYAAT*RIF*VAKTRYVYCRKQNVRL 8
           +A DAL   T S   A+      + T Y   R++ +RL
Sbjct: 472 NALDALRTGTISANKASKAFGIPSSTLYKIARREGIRL 509


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,965
Number of Sequences: 438
Number of extensions: 462
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)