Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D13
(409 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 86 1e-17
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 86 1e-17
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 86 1e-17
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 62 1e-10
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 62 1e-10
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 62 1e-10
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 61 3e-10
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 61 3e-10
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 54 3e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 3e-06
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 47 6e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 8e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 8e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 8e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 44 4e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 44 4e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 44 4e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 44 4e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 43 7e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 1e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 42 2e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 42 2e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 42 2e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 42 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 42 2e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 39 0.001
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 39 0.001
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 39 0.001
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 39 0.001
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 38 0.002
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 38 0.002
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.003
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 38 0.003
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 38 0.003
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.004
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.004
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.004
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.004
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 37 0.005
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 37 0.005
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.005
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.005
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 37 0.006
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 37 0.006
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 36 0.009
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.009
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 35 0.020
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 34 0.034
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.034
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 34 0.034
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.079
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 33 0.079
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 33 0.079
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.079
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.079
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.079
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.079
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.079
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 32 0.18
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 31 0.24
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 31 0.42
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 31 0.42
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 31 0.42
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 31 0.42
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 31 0.42
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 30 0.56
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 30 0.74
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 30 0.74
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 30 0.74
U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppress... 29 0.98
U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein. 29 0.98
S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein. 29 0.98
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 29 0.98
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 29 1.3
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 29 1.3
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 1.3
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 29 1.3
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 29 1.7
Z83119-7|CAH04748.1| 504|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z83119-6|CAB05580.2| 591|Caenorhabditis elegans Hypothetical pr... 27 3.9
AL110494-3|CAH04736.1| 504|Caenorhabditis elegans Hypothetical ... 27 3.9
AL110494-2|CAC14398.1| 591|Caenorhabditis elegans Hypothetical ... 27 3.9
AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical ... 27 3.9
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 27 5.2
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 5.2
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 5.2
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 5.2
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 5.2
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 27 6.9
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 27 6.9
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 27 6.9
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 27 6.9
AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical ... 27 6.9
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 6.9
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 26 9.1
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 331 MLGATLKVEIS---RKRDGPRTGNFRGGR 408
+ G +VE+S R+ G R G F GGR
Sbjct: 64 ICGVRARVELSTGQRRGGGGRGGGF-GGR 91
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 331 MLGATLKVEIS---RKRDGPRTGNFRGGR 408
+ G +VE+S R+ G R G F GGR
Sbjct: 64 ICGVRARVELSTGQRRGGGGRGGGF-GGR 91
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 85.8 bits (203), Expect = 1e-17
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
+VYVGGL ++LE FD++G++ VWVA PPGFAF+E++++++AEDA A++G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 331 MLGATLKVEIS---RKRDGPRTGNFRGGR 408
+ G +VE+S R+ G R G F GGR
Sbjct: 64 ICGVRARVELSTGQRRGGGGRGGGF-GGR 91
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 331 MLGATLKVEISRKRDGPRTGNFRGG 405
M G+++++ + R PR GN R G
Sbjct: 60 MEGSSMRLVVEMARGKPR-GNDRHG 83
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 331 MLGATLKVEISRKRDGPRTGNFRGG 405
M G+++++ + R PR GN R G
Sbjct: 60 MEGSSMRLVVEMARGKPR-GNDRHG 83
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 62.5 bits (145), Expect = 1e-10
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G + ++ D+ER YGK+N++ + GFAF++FE+ ++AEDAC ++G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKY---GFAFVDFEDSRDAEDACHDLDGKT 59
Query: 331 MLGATLKVEISRKRDGPRTGNFRGG 405
M G+++++ + R PR GN R G
Sbjct: 60 MEGSSMRLVVEMARGKPR-GNDRHG 83
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 60.9 bits (141), Expect = 3e-10
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 17/109 (15%)
Frame = +1
Query: 133 MSSGGT---RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAE 300
M GG+ +VYVG L ++++++E F KYG++ V + P FAF+EFE+ ++AE
Sbjct: 1 MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAE 60
Query: 301 DACSAMNGIEMLGATLKVEISR-----------KRDG--PRTGNFRGGR 408
DA A +G E G ++VE +R +DG R G+FRGGR
Sbjct: 61 DAVRARDGYEFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGR 109
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 60.9 bits (141), Expect = 3e-10
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 17/109 (15%)
Frame = +1
Query: 133 MSSGGT---RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-PGFAFIEFENLQEAE 300
M GG+ +VYVG L ++++++E F KYG++ V + P FAF+EFE+ ++AE
Sbjct: 1 MPRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAE 60
Query: 301 DACSAMNGIEMLGATLKVEISR-----------KRDG--PRTGNFRGGR 408
DA A +G E G ++VE +R +DG R G+FRGGR
Sbjct: 61 DAVRARDGYEFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGR 109
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA +NG E
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 331 MLGATLKVEISRKR-DGPRTGNFRGG 405
+ G + ++ S+ R G G F GG
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGG 86
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA +NG E
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 331 MLGATLKVEISRKR-DGPRTGNFRGG 405
+ G + ++ S+ R G G F GG
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGG 86
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R+Y+G L + ++D+E F YG++ V L GF F+EF++ ++AEDA +NG E
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV---LLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 331 MLGATLKVEISRKR-DGPRTGNFRGG 405
+ G + ++ S+ R G G F GG
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGG 86
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 54.4 bits (125), Expect = 3e-08
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
RVY+G L D+E F YGKL+ V + GF F++F++ ++A+DA +NG E
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDV---IMKNGFGFVDFQDQRDADDAVHDLNGKE 59
Query: 331 MLGATLKVEISRKRDG---PRTGN-FRG 402
+ G + +E R++ G R+G+ FRG
Sbjct: 60 LCGERVILEFPRRKVGYNEERSGSGFRG 87
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.0 bits (109), Expect = 3e-06
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +1
Query: 139 SGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAED 303
SG VYVG +E+L F G++N+V + + P GFAFIEF A+
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 304 ACSAMNGIEMLGATLKVEISRK 369
A MNG E G L+V ++ K
Sbjct: 62 AVEQMNGAEFNGRPLRVNLANK 83
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 47.6 bits (108), Expect = 3e-06
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 196 LEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 360
+E F G + S+W+A PPGFAF+ F+ A DA +NG ++ KVE+
Sbjct: 44 IEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVEM 98
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.8 bits (106), Expect = 6e-06
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAM 318
T VYV + KE LE+ F K+G + S V GF F+ F N +EAE A A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 319 NGIEMLGATLKVEISR 366
+ + G LK+ + R
Sbjct: 273 HDSTIEGTDLKLHVCR 288
Score = 44.0 bits (99), Expect = 4e-05
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 312
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 316 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 375
Query: 313 AMNGIEMLGATLKVEISRKRDGPR 384
MN + L V I ++++ R
Sbjct: 376 EMNSKMVCSKPLYVAIGQRKEDRR 399
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 8e-06
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAM 318
T VYV + KE LE+ F K+G + S V GF F+ F N +EAE A A+
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 319 NGIEMLGATLKVEISR 366
+ + G LK+ + R
Sbjct: 213 HDSTIEGTDLKLHVCR 228
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 312
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 256 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 315
Query: 313 AMNGIEMLGATLKVEISRKRDGPR 384
MN + L V I+++++ R
Sbjct: 316 EMNSKMVCSKPLYVAIAQRKEDRR 339
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 8e-06
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAM 318
T VYV + KE LE+ F K+G + S V GF F+ F N +EAE A A+
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 319 NGIEMLGATLKVEISR 366
+ + G LK+ + R
Sbjct: 210 HDSTIEGTDLKLHVCR 225
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 312
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 253 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 312
Query: 313 AMNGIEMLGATLKVEISRKRDGPR 384
MN + L V I+++++ R
Sbjct: 313 EMNSKMVCSKPLYVAIAQRKEDRR 336
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.4 bits (105), Expect = 8e-06
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAM 318
T VYV + KE LE+ F K+G + S V GF F+ F N +EAE A A+
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 319 NGIEMLGATLKVEISR 366
+ + G LK+ + R
Sbjct: 273 HDSTIEGTDLKLHVCR 288
Score = 44.4 bits (100), Expect = 3e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACS 312
G +YV L E + + L+++F+ YG + S V + GF F+ FE +EA A +
Sbjct: 316 GVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVT 375
Query: 313 AMNGIEMLGATLKVEISRKRDGPR 384
MN + L V I+++++ R
Sbjct: 376 EMNSKMVCSKPLYVAIAQRKEDRR 399
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
G VYVG ++DL F + G +++V + + P GFAF+EF A+ A
Sbjct: 3 GFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAV 62
Query: 310 SAMNGIEMLGATLKVEISRKRD 375
NG++ G L+V +++ R+
Sbjct: 63 DQFNGVDFNGRALRVNLAQNRN 84
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.2 bits (102), Expect = 2e-05
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 133 MSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEA 297
M+S G VYVG + +E++ F G +N+V + + P GFAF+EF A
Sbjct: 1 MASQGFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGA 60
Query: 298 EDACSAMNGIEMLGATLKVEISRK 369
+ A +NG+ G L+V + K
Sbjct: 61 QRAVEQLNGVAFNGRNLRVNYANK 84
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +1
Query: 259 GFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGPRTGNFRGGR 408
GFA++ FEN Q+ A S +NG + LKV +++RD G RGGR
Sbjct: 54 GFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRDRSDRGGGRGGR 103
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.0 bits (99), Expect = 4e-05
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDAC 309
G V+V + E ++D+ +F +YGK+ ++ + L+ G+A +E+E +EA +A
Sbjct: 54 GWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAI 113
Query: 310 SAMNGIEMLGATLKVE 357
N ++LG +KV+
Sbjct: 114 DQSNDTDLLGQNVKVD 129
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 44.0 bits (99), Expect = 4e-05
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACS 312
+R+YVG + I+++ L R FD +G + S+ ++ +P FAF+E+E + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 313 AMNGIEMLGATLKV 354
+MNG + G LKV
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSA 315
RVYV + + + DL+ F+ +G++ +A P G F ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 316 MNGIEMLGATLK 351
MN ++ G L+
Sbjct: 268 MNMFDLGGQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 44.0 bits (99), Expect = 4e-05
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACS 312
+R+YVG + I+++ L R FD +G + S+ ++ +P FAF+E+E + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 313 AMNGIEMLGATLKV 354
+MNG + G LKV
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSA 315
RVYV + + + DL+ F+ +G++ +A P G F ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 316 MNGIEMLGATLKV 354
MN ++ G L+V
Sbjct: 268 MNMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 44.0 bits (99), Expect = 4e-05
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACS 312
+R+YVG + I+++ L R FD +G + S+ ++ +P FAF+E+E + A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 313 AMNGIEMLGATLKV 354
+MNG + G LKV
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSA 315
RVYV + + + DL+ F+ +G++ +A P G F ++EF NL +A +
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 316 MNGIEMLGATLKV 354
MN ++ G L+V
Sbjct: 268 MNMFDLGGQYLRV 280
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 43.2 bits (97), Expect = 7e-05
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSA 315
++ T VYVG + + ++++ R FD++G +N V G+AF++FE + A A
Sbjct: 252 AADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVRT-FKIQGYAFVKFETKESAARAIVQ 309
Query: 316 MNGIEMLGATLKVEISRKRD 375
MN ++ G ++ + D
Sbjct: 310 MNNADIGGQIVRCSWGKSGD 329
Score = 34.7 bits (76), Expect = 0.026
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 318
V+VG L I L F K+G+++ + + G+ F+ + ++AE A M
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 319 NGIEMLGATLKVE-ISRK--RDGPRTGNFRGGR 408
NG + T++ +RK DG R G+ RG R
Sbjct: 194 NGAWLGRRTIRTNWATRKPDEDGERGGD-RGDR 225
Score = 31.1 bits (67), Expect = 0.32
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYG---KLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 324
++V L I E L F++ G K ++ LN P +AF+EF + +A A + NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP-YAFVEFSDHNQATLALQSHNG 100
Query: 325 IEMLGATLKV 354
E+L + V
Sbjct: 101 RELLEKEMHV 110
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 318
V+VG + + ++ + F K G + S+ + + P G+ FIEF ++Q AE A +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 319 NGIEMLGATLKVE 357
NG E+ G L+V+
Sbjct: 80 NGYELSGRILRVD 92
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 42.3 bits (95), Expect = 1e-04
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV----ALNPPGFAFIEFENLQEAEDACSAMN 321
++VG + + L REF+ YGK+ + + A P G+AFIE+ + E A +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 322 GIEMLGATLKVEISRKR 372
GI++ G L V+ R R
Sbjct: 166 GIKVDGKRLVVDYERGR 182
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 NHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFEN 285
N + G +++ L + DL F +G + S V ++ F F+ +EN
Sbjct: 326 NGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
Query: 286 LQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
Q A +A SAMNG ++ LKV++ R P
Sbjct: 386 AQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 417
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 NHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFEN 285
N + G +++ L + DL F +G + S V ++ F F+ +EN
Sbjct: 490 NGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Query: 286 LQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
Q A +A SAMNG ++ LKV++ R P
Sbjct: 550 AQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 NHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFEN 285
N + G +++ L + DL F +G + S V ++ F F+ +EN
Sbjct: 490 NGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Query: 286 LQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
Q A +A SAMNG ++ LKV++ R P
Sbjct: 550 AQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 NHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFEN 285
N + G +++ L + DL F +G + S V ++ F F+ +EN
Sbjct: 419 NGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
Query: 286 LQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
Q A +A SAMNG ++ LKV++ R P
Sbjct: 479 AQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 510
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 121 NHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPG-----FAFIEFEN 285
N + G +++ L + DL F +G + S V ++ F F+ +EN
Sbjct: 490 NGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
Query: 286 LQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
Q A +A SAMNG ++ LKV++ R P
Sbjct: 550 AQSATNAISAMNGFQIGSKRLKVQLKVDRGNP 581
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 41.9 bits (94), Expect = 2e-04
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACSAM 318
+YVGG E + ++ L F +G + ++ + ++ GF F+EF+ ++A A M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 319 NGIEMLGATLKVEISR 366
N E+ G T++V +R
Sbjct: 73 NESELFGKTIRVNFAR 88
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 41.5 bits (93), Expect = 2e-04
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 160 VGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAMNG 324
V L + + +++L F K G++ +++A + P GFAF+ FE+ +A A + +N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 325 IEMLGATLKVEISR 366
I M LKVE +R
Sbjct: 240 IRMYHMVLKVEWTR 253
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP----GFAFIEFENLQEAED 303
+ G T V V L I ++ + F+ +G++ + + ++ GFA I F N +A+
Sbjct: 123 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 182
Query: 304 ACSAMNGIEMLGATLKVEISRKRDGP 381
+C +N E+ G +++ I ++ P
Sbjct: 183 SCEQLNNFELAGRCIRLSIKQESQAP 208
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP----GFAFIEFENLQEAED 303
+ G T V V L I ++ + F+ +G++ + + ++ GFA I F N +A+
Sbjct: 268 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 327
Query: 304 ACSAMNGIEMLGATLKVEISRKRDGP 381
+C +N E+ G +++ I ++ P
Sbjct: 328 SCEQLNNFELAGRCIRLSIKQESQAP 353
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 318
V+VG L + + E L+ F K+G+++ V G+ F+ F N Q AE+A + M
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 319 NG 324
NG
Sbjct: 197 NG 198
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGI 327
T VYVG + + DL F YG + V + +AF+ +E + A A MNG
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRI-FKTQRYAFVRYEKKECATKAIMEMNGK 295
Query: 328 EMLGATLKVEISRKRDGP 381
EM G ++ R + P
Sbjct: 296 EMAGNQVRCSWGRTQAVP 313
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSA 315
S T VYVG + + ++++ + F +G++ V + G+AF++F+N A A
Sbjct: 124 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQ 181
Query: 316 MNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
MN ++ G ++ + D TG GG
Sbjct: 182 MNNQDVGGQLVRCSWGKTGD---TGKTPGG 208
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 318
V+VG L + + L F +G ++ V G+ F+ + +EAE A M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 319 NGIEMLGATLKVEISRKRDG 378
NG + T++ + ++ G
Sbjct: 84 NGQWLGRRTIRTNWATRKPG 103
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSA 315
S T VYVG + + ++++ + F +G++ V + G+AF++F+N A A
Sbjct: 134 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQ 191
Query: 316 MNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
MN ++ G ++ + D TG GG
Sbjct: 192 MNNQDVGGQLVRCSWGKTGD---TGKTPGG 218
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 318
V+VG L + + L F +G ++ V G+ F+ + +EAE A M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 319 NGIEMLGATLKVEISRKRDG 378
NG + T++ + ++ G
Sbjct: 94 NGQWLGRRTIRTNWATRKPG 113
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSA 315
S T VYVG + + ++++ + F +G++ V + G+AF++F+N A A
Sbjct: 237 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQ 294
Query: 316 MNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
MN ++ G ++ + D TG GG
Sbjct: 295 MNNQDVGGQLVRCSWGKTGD---TGKTPGG 321
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 318
V+VG L + + L F +G ++ V G+ F+ + +EAE A M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 319 NGIEMLGATLKVEISRKRDG 378
NG + T++ + ++ G
Sbjct: 197 NGQWLGRRTIRTNWATRKPG 216
Score = 30.3 bits (65), Expect = 0.56
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDACSAMNG 324
+YVG L + ++ + F++ G + V N P +AF+EF + +A A MN
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP-YAFVEFSDHGQASQALQTMNK 106
Query: 325 IEMLGATLKV 354
+L +KV
Sbjct: 107 RLLLDREMKV 116
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/90 (26%), Positives = 44/90 (48%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSA 315
S T VYVG + + ++++ + F +G++ V + G+AF++F+N A A
Sbjct: 205 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRI-FKMQGYAFVKFDNKDAAAKAIVQ 262
Query: 316 MNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
MN ++ G ++ + D TG GG
Sbjct: 263 MNNQDVGGQLVRCSWGKTGD---TGKTPGG 289
Score = 32.7 bits (71), Expect = 0.10
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWV-----ALNPPGFAFIEFENLQEAEDACSAM 318
V+VG L + + L F +G ++ V G+ F+ + +EAE A M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 319 NGIEMLGATLKVEISRKRDG 378
NG + T++ + ++ G
Sbjct: 165 NGQWLGRRTIRTNWATRKPG 184
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 151 RVYVGGLVEGI-KKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGI 327
RV++G + I ++D+ F +GK+ +V GF F++F A+++C ++NG+
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQ-GFGFVQFNEAGSADESCRSLNGM 142
Query: 328 EMLGATLKVEIS 363
L V ++
Sbjct: 143 SWKACCLDVHLA 154
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 324
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 308
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 306
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 324
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 308
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 306
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 324
R++VGGL KE L++ F ++G + ++ P +A++ +EN +++AC ++ G
Sbjct: 229 RLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQP-YAYVVYENTHTSQEACRSLRG 285
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL---NPPGFAFIEFENLQEAEDA 306
++VG + +K+ ++ F+++GK+ V + +AF+ F+ + +A A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 142 GGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACS 312
G R++V + + DL+ F+K+G ++ V + N GF F+ E Q+AE A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 313 AMNGIEMLGATLKVEISRKR 372
++G + G ++V + R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +1
Query: 142 GGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACS 312
G R++V + + DL+ F+K+G ++ V + N GF F+ E Q+AE A
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 313 AMNGIEMLGATLKVEISRKR 372
++G + G ++V + R
Sbjct: 211 ELHGSMIEGRKIEVNCATAR 230
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 318
VYVG + G E++E+ F G ++ V + + P GFA++EF + ++A AM
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNAL-AM 138
Query: 319 NGIEMLGATLKVEISR-KRDGPRTGN---FRG 402
+ G +KV+ R + G T N FRG
Sbjct: 139 TDSLLRGRQIKVDPKRTNKPGMSTTNRPPFRG 170
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMN 321
R+YV + +++DL F YG++ SV + N GF F+ ++++ E A +A++
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 322 GIEMLGATLKV 354
+ G ++V
Sbjct: 112 ESHVQGRIIEV 122
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDACSAMN 321
R+YV + +++DL F YG++ SV + N GF F+ ++++ E A +A++
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 322 GIEMLGATLKV 354
+ G ++V
Sbjct: 112 ESHVQGRIIEV 122
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 306
+ G R++V + ++ DL F+K G + V + N GF F+ +N +A+ A
Sbjct: 96 TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRA 155
Query: 307 CSAMNGIEMLGATLKVEISRKR 372
+ NG + G ++V ++ +R
Sbjct: 156 RAEFNGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 37.5 bits (83), Expect = 0.004
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN---PPGFAFIEFENLQEAEDA 306
+ G R++V + ++ DL F+K G + V + N GF F+ +N +A+ A
Sbjct: 96 TDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRA 155
Query: 307 CSAMNGIEMLGATLKVEISRKR 372
+ NG + G ++V ++ +R
Sbjct: 156 RAEFNGTTIEGRRVEVNLATQR 177
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +1
Query: 124 HTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENL 288
H+ + +++VGG+ + EDL F +YG++ V + GFAF+EF
Sbjct: 21 HSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTG 80
Query: 289 QEAEDACSAMNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
+ + A +A + G +++V+ ++ R+ + F GG
Sbjct: 81 EGCKLALAAREQ-TIKGKSVEVKPAKSRENKKV--FVGG 116
Score = 35.5 bits (78), Expect = 0.015
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSV-W----VALNPPGFAFIEFENLQEAEDACS 312
+V+VGGL ++DL F+++GK++ + W FAFI FE + A+ A S
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +1
Query: 124 HTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENL 288
H+ + +++VGG+ + EDL F +YG++ V + GFAF+EF
Sbjct: 21 HSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTG 80
Query: 289 QEAEDACSAMNGIEMLGATLKVEISRKRDGPRTGNFRGG 405
+ + A +A + G +++V+ ++ R+ + F GG
Sbjct: 81 EGCKLALAAREQ-TIKGKSVEVKPAKSRENKKV--FVGG 116
Score = 35.5 bits (78), Expect = 0.015
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSV-W----VALNPPGFAFIEFENLQEAEDACS 312
+V+VGGL ++DL F+++GK++ + W FAFI FE + A+ A S
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSA 315
T V+V E + +E L F K+G++ S V + P GF F+ F + A A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 316 MNGIEMLGATLKVEISR 366
+N + G K+ + R
Sbjct: 298 LNDSILEGTDCKLSVCR 314
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSA 315
T V+V E + +E L F K+G++ S V + P GF F+ F + A A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 316 MNGIEMLGATLKVEISR 366
+N + G K+ + R
Sbjct: 298 LNDSILEGTDCKLSVCR 314
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.005
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSV-----WVALNPPGFAFIEFENLQEAEDACSAM 318
+YVGGL E + + L + G + SV V N GF F+EF ++A+ A +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 319 NGIEMLGATLKV 354
N I++ G +KV
Sbjct: 75 NMIKLYGKPIKV 86
Score = 35.5 bits (78), Expect = 0.015
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP------PGFAFIEFENLQEAEDA 306
G ++VG L + ++ L F +G + V + GFAFI F + + ++ A
Sbjct: 99 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
Query: 307 CSAMNGIEMLGATLKVEISRKRD--GPRTG 390
AMNG + + V + KRD G R G
Sbjct: 159 LEAMNGQFLCNRAITVSYAFKRDSKGERHG 188
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.005
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSV-----WVALNPPGFAFIEFENLQEAEDACSAM 318
+YVGGL E + + L + G + SV V N GF F+EF ++A+ A +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 319 NGIEMLGATLKV 354
N I++ G +KV
Sbjct: 85 NMIKLYGKPIKV 96
Score = 35.5 bits (78), Expect = 0.015
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP------PGFAFIEFENLQEAEDA 306
G ++VG L + ++ L F +G + V + GFAFI F + + ++ A
Sbjct: 109 GANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 168
Query: 307 CSAMNGIEMLGATLKVEISRKRD--GPRTG 390
AMNG + + V + KRD G R G
Sbjct: 169 LEAMNGQFLCNRAITVSYAFKRDSKGERHG 198
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.005
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +1
Query: 136 SSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP------PGFAFIEFENLQEA 297
+S RV + L + K LE F YG + +V + + G+ ++E++NL++A
Sbjct: 129 ASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDA 188
Query: 298 EDACSAMNGIEMLGATLKVEIS 363
E + M+G ++ G + VE++
Sbjct: 189 EKSIKHMDGGQIDGMAVHVEMT 210
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 36.7 bits (81), Expect = 0.006
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +1
Query: 118 TNHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWV----ALNPPG-FAFIEFE 282
T ++ G +++ L + +L + F +G + S V A N F F+ ++
Sbjct: 419 TPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
Query: 283 NLQEAEDACSAMNGIEMLGATLKVEISRKRDGPR 384
N+ ++ A +AMNG ++ LKV++ R R+ R
Sbjct: 479 NIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 36.7 bits (81), Expect = 0.006
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +1
Query: 118 TNHTIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWV----ALNPPG-FAFIEFE 282
T ++ G +++ L + +L + F +G + S V A N F F+ ++
Sbjct: 419 TPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYD 478
Query: 283 NLQEAEDACSAMNGIEMLGATLKVEISRKRDGPR 384
N+ ++ A +AMNG ++ LKV++ R R+ R
Sbjct: 479 NIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESR 512
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 36.3 bits (80), Expect = 0.009
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDACSA 315
R+++ L K++DL+ F KYG+++ V V ++ GFA +EF + A A SA
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 316 MNGIEMLGATLKV 354
++G G + +
Sbjct: 340 LDGYVFKGRMMHI 352
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP----GFAFIEFENLQEAEDACSA 315
TR+ V L ++ L + F+KYG+++ + GFAF+ F + A +A +
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 316 MNGIEMLGATLKVEISR 366
N L VE R
Sbjct: 63 SNQTFFNSKKLTVEECR 79
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.009
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDAC 309
G +YVG + + ++ L F+K GK+ + + ++P G+AF+ + N ++A A
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAA 258
Query: 310 SAMNGIEM-LGATLKVEIS 363
+G E+ G LKV +S
Sbjct: 259 KTYDGHEISTGKPLKVNVS 277
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 35.1 bits (77), Expect = 0.020
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Frame = +1
Query: 112 VNTNHTIMSSGGTRVYVGGLVEGIKKEDLERE----FDKYGKLNSVWVALNPP--GFAFI 273
+N NHTI YV L E +KK++L+R F ++G++ + G A I
Sbjct: 4 INPNHTI--------YVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHI 55
Query: 274 EFENLQEAEDACSAMNGIEMLGATLKVEISRK 369
F+ + A +A A+ G G ++++ +R+
Sbjct: 56 VFKEVSSASNALRALQGFPFYGKPMRIQYARE 87
Score = 31.1 bits (67), Expect = 0.32
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEM 333
++ + EG + E ++ F ++ L V N FAFIE+E+ +E A A++ +
Sbjct: 145 LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDNFRI 204
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.034
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAC 309
+V++GGL ED+++ F+ YGK+ + + GF F+ F++ + A+ C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 34.3 bits (75), Expect = 0.034
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIEM 333
++ L + E LE F+++ L + + N PG AF+EF+ A A + +N ++
Sbjct: 134 LFCTNLPDSATAEMLEIMFNQFAGLKDIRMVPNRPGIAFVEFDTDSLAIPARTTLNNFKI 193
Query: 334 LGA-TLKVEISRK 369
T++V+ ++K
Sbjct: 194 SAEHTMRVDYAKK 206
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.034
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDAC 309
+V++GGL ED+++ F+ YGK+ + + GF F+ F++ + A+ C
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.079
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 190 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 354
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Query: 355 EISR 366
+ S+
Sbjct: 315 DFSQ 318
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.079
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 190 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 354
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 255 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
Query: 355 EISR 366
+ S+
Sbjct: 315 DFSQ 318
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.1 bits (72), Expect = 0.079
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 190 EDLEREFDKYGKLNSVWVALNPPG-----FAFIEFENLQEAEDACSAMNGIEMLGATLKV 354
EDLE F ++GK+N+ + + +AFIEF+N + E A M+ + + + V
Sbjct: 186 EDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 245
Query: 355 EISR 366
+ S+
Sbjct: 246 DFSQ 249
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.079
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDACS 312
T + + L +G+ +E++ F G++ S + + G+ F+ + ++A A S
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 313 AMNGIEMLGATLKVEISR 366
+ NG+ + T+KV +R
Sbjct: 102 SFNGLRLQNKTIKVSYAR 119
Score = 31.9 bits (69), Expect = 0.18
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 259 GFAFIEFENLQEAEDACSAMNGIEMLGATLKV 354
G+AF+ N EA +A ++NG + G TL+V
Sbjct: 415 GYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.079
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 TIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL----NPPGFAFIEFENLQE 294
TI+ ++++GGL + ++ ++ +G L + + + N G+AF E+ +
Sbjct: 284 TIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTL 343
Query: 295 AEDACSAMNGIEMLGATLKVEIS 363
+ A + +NG+++ L V+++
Sbjct: 344 TDQAIAGLNGMQLGDKQLVVQLA 366
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.1 bits (72), Expect = 0.079
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 TIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL----NPPGFAFIEFENLQE 294
TI+ ++++GGL + ++ ++ +G L + + + N G+AF E+ +
Sbjct: 284 TIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTL 343
Query: 295 AEDACSAMNGIEMLGATLKVEIS 363
+ A + +NG+++ L V+++
Sbjct: 344 TDQAIAGLNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.079
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 TIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL----NPPGFAFIEFENLQE 294
TI+ ++++GGL + ++ ++ +G L + + + N G+AF E+ +
Sbjct: 259 TIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTL 318
Query: 295 AEDACSAMNGIEMLGATLKVEIS 363
+ A + +NG+++ L V+++
Sbjct: 319 TDQAIAGLNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.1 bits (72), Expect = 0.079
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 127 TIMSSGGTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVAL----NPPGFAFIEFENLQE 294
TI+ ++++GGL + ++ ++ +G L + + + N G+AF E+ +
Sbjct: 262 TIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTL 321
Query: 295 AEDACSAMNGIEMLGATLKVEIS 363
+ A + +NG+++ L V+++
Sbjct: 322 TDQAIAGLNGMQLGDKQLVVQLA 344
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 31.9 bits (69), Expect = 0.18
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVA--LNPPGFAFIEFENLQEAEDACSAMNGI 327
+Y+ L I E++ F K+G + + V G AF+ +E++ +A+ AC ++G
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAKTACEHLSGY 80
Query: 328 EMLGATLKV 354
+ L V
Sbjct: 81 NVSNRYLVV 89
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 31.5 bits (68), Expect = 0.24
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVW 240
+V+VGGL +K+ D+ F +YG+L W
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRLQVDW 118
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 133
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 133
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 30.7 bits (66), Expect = 0.42
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDAC 309
R+YV G+ E ++ L F KYG + + L+ P GF F+ F++ ++ D C
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDD-HDSVDQC 171
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 30.3 bits (65), Expect = 0.56
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 208 FDKYGKLNSVWVALNP---PGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKR 372
F+K G + V + N GF F+ +N +A+ A + NG + G ++V ++ +R
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 265 AFIEFENLQEAEDACSAMNGIEMLG--ATLKVEISR 366
A +EFE+++ A+ A AMNG ++ TLKVE ++
Sbjct: 163 ALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK 198
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 265 AFIEFENLQEAEDACSAMNGIEMLG--ATLKVEISR 366
A +EFE+++ A+ A AMNG ++ TLKVE ++
Sbjct: 163 ALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAK 198
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 29.9 bits (64), Expect = 0.74
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 318
+Y+GGL + + D+ F +YG++ ++ + + GFAF+ +++ + A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 319 NGIEMLGATLKVE 357
NGI + ++V+
Sbjct: 100 NGISLHKRMIRVD 112
>U39853-2|AAK39225.1| 771|Caenorhabditis elegans Kinase suppressor
of activatedras protein 1 protein.
Length = 771
Score = 29.5 bits (63), Expect = 0.98
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -3
Query: 338 PNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSRSRSSFLIPSTSPPT 159
P P A+ +SS++ + S A P G + + PY RS FL P T +
Sbjct: 307 PAFQFPDTAIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYS 362
Query: 158 YTRVPPLLMI 129
P+L+I
Sbjct: 363 VHNRLPILVI 372
>U38820-1|AAA92436.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 29.5 bits (63), Expect = 0.98
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -3
Query: 338 PNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSRSRSSFLIPSTSPPT 159
P P A+ +SS++ + S A P G + + PY RS FL P T +
Sbjct: 307 PAFQFPDTAIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYS 362
Query: 158 YTRVPPLLMI 129
P+L+I
Sbjct: 363 VHNRLPILVI 372
>S80647-1|AAB35769.1| 771|Caenorhabditis elegans KSR-1 protein.
Length = 771
Score = 29.5 bits (63), Expect = 0.98
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -3
Query: 338 PNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSRSRSSFLIPSTSPPT 159
P P A+ +SS++ + S A P G + + PY RS FL P T +
Sbjct: 307 PAFQFPDTAIDSSSSTNSSAPSTPALPAGISGNVSSLTAPY----RSERKFLFPDTENYS 362
Query: 158 YTRVPPLLMI 129
P+L+I
Sbjct: 363 VHNRLPILVI 372
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 29.5 bits (63), Expect = 0.98
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 187 KEDLEREFDKYGKLNSVWVALN-PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEI 360
KE++ + KYG + V V N P G + F +E++ A ++G + G L E+
Sbjct: 335 KEEMTQSCQKYGIVKKVVVYANHPDGVVSVTFPTTEESDMAVKYLHGRVVDGRKLTAEL 393
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 29.1 bits (62), Expect = 1.3
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Frame = +1
Query: 178 GIKKEDLEREFDKYGKLNSVWVALNP-----PGFAFIEFENLQEAEDACSAMNGIEM--- 333
G +++L F ++G + + VA N G+A++ F+N AE A +MNG M
Sbjct: 42 GFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGYLMFEQ 101
Query: 334 -LGAT-LKVEISRK--RDGP 381
LG T +K E+ K R GP
Sbjct: 102 RLGCTVMKPELIPKAMRHGP 121
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAED 303
R++VGG + +L F+K+ + V + + G+ FI FE +AE+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.1 bits (62), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVW---VALNPPGFAFIEFENLQEAEDACSAMNG 324
+YV E + +E LE F + G + V V + FA +EFE+ A MNG
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFEDELSVLFAIELMNG 74
Query: 325 IEMLGATLKVE 357
+ + L+V+
Sbjct: 75 VRLFNQELQVK 85
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAED 303
R++VGG + +L F+K+ + V + + G+ FI FE +AE+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSAM 318
+YVG L K++ + F + G + V + L+ P GF F+E+ ++AE A +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 319 NGIEM 333
+ M
Sbjct: 99 SNTRM 103
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 325 IEMLGATLKVEISRKRDGPRTGNFRGGR 408
++ G +IS +RD P+ G FRGGR
Sbjct: 412 LDAFGFDGHAQISEQRDQPQGGGFRGGR 439
>Z83119-7|CAH04748.1| 504|Caenorhabditis elegans Hypothetical
protein R05H10.3b protein.
Length = 504
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R + GG+ E + + L D KL + NP F + E L++ DA + +G+E
Sbjct: 366 RDHYGGIPEDLIRHFLLESADPAPKLICMKYLSNPDFFDSLSAEELEKYLDAGLSDDGME 425
Query: 331 MLGATLKV 354
M +K+
Sbjct: 426 MRQEAIKL 433
>Z83119-6|CAB05580.2| 591|Caenorhabditis elegans Hypothetical
protein R05H10.3a protein.
Length = 591
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R + GG+ E + + L D KL + NP F + E L++ DA + +G+E
Sbjct: 453 RDHYGGIPEDLIRHFLLESADPAPKLICMKYLSNPDFFDSLSAEELEKYLDAGLSDDGME 512
Query: 331 MLGATLKV 354
M +K+
Sbjct: 513 MRQEAIKL 520
>AL110494-3|CAH04736.1| 504|Caenorhabditis elegans Hypothetical
protein R05H10.3b protein.
Length = 504
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R + GG+ E + + L D KL + NP F + E L++ DA + +G+E
Sbjct: 366 RDHYGGIPEDLIRHFLLESADPAPKLICMKYLSNPDFFDSLSAEELEKYLDAGLSDDGME 425
Query: 331 MLGATLKV 354
M +K+
Sbjct: 426 MRQEAIKL 433
>AL110494-2|CAC14398.1| 591|Caenorhabditis elegans Hypothetical
protein R05H10.3a protein.
Length = 591
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGIE 330
R + GG+ E + + L D KL + NP F + E L++ DA + +G+E
Sbjct: 453 RDHYGGIPEDLIRHFLLESADPAPKLICMKYLSNPDFFDSLSAEELEKYLDAGLSDDGME 512
Query: 331 MLGATLKV 354
M +K+
Sbjct: 513 MRQEAIKL 520
>AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical
protein Y48G1BL.4 protein.
Length = 79
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENLQEAED 303
RVY+G D E F YGKL + N G +F++ +A+D
Sbjct: 3 RVYIGRFPNRASDRDAEHFFCDYGKLPDA-IMKNVFGVGCKDFQDQSDADD 52
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 154 VYVGGLVEGIKKEDLEREFDKYG----KLNSVWVALNPPGFAFIEFENLQEAEDACSAMN 321
+++G + +E L + F + G K+ V+V G+ FIEF EA +N
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDELKGYCFIEFITFDEARQTLYDLN 129
Query: 322 GIEMLG 339
G + G
Sbjct: 130 GNRIPG 135
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISRKRDGPRTGN 393
FAF+EF N + AE + G L G TL VE ++ +GN
Sbjct: 40 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAKGDPAAGSGN 85
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISRKRDGPRTGN 393
FAF+EF N + AE + G L G TL VE ++ +GN
Sbjct: 183 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAKGDPAAGSGN 228
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISRKRDGPRTGN 393
FAF+EF N + AE + G L G TL VE ++ +GN
Sbjct: 211 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAKGDPAAGSGN 256
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISRKRDGPRTGN 393
FAF+EF N + AE + G L G TL VE ++ +GN
Sbjct: 269 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAKGDPAAGSGN 314
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 FAFIEFENLQEAEDACSAMNGIEML--GATLKVEISRKRDGPRTGN 393
FAF+EF N + AE + G L G TL VE ++ +GN
Sbjct: 270 FAFVEFSNRETAEQWMTDYEGWLTLDDGRTLAVEYAKGDPAAGSGN 315
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 26.6 bits (56), Expect = 6.9
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP--------GFAFIEFENLQEAEDA 306
R+ + L KKEDL+ GK V + L P GF FI+F +AE
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKF--VEIVLPPSRKDPKTCAGFGFIQFVEKADAEKG 153
Query: 307 CSAMNGIEMLGATLKVEISRKRD 375
N ++LG ++ + + +D
Sbjct: 154 REFFNTNKVLGRSVAADWALDKD 176
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 26.6 bits (56), Expect = 6.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 377 PSRFLEI-STLRVAPNISMPFMALHASSASCKFSNSMNAKPGGFNATHTEFNFPYLSNSR 201
PSR + I ST A I + L S A+ N ++ G ++TH E ++ +++SR
Sbjct: 758 PSRHMMIDSTYESADRILLSSPIL--SQANTSTPNGISPSNGAESSTHNEIDYAPIASSR 815
Query: 200 S 198
S
Sbjct: 816 S 816
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 26.6 bits (56), Expect = 6.9
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 151 RVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN-----PPGFAFIEFENLQEAEDACSA 315
+++VG + + D R F+KYG + S + + G F+ F + ++A +A A
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 316 MNGIEML 336
++ I+++
Sbjct: 116 LHNIKVI 122
>AF038618-2|AAB92072.1| 487|Caenorhabditis elegans Hypothetical
protein F42G8.8 protein.
Length = 487
Score = 26.6 bits (56), Expect = 6.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 253 PPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGPRTGNFR 399
P GF F + L A MN + GATLKVE + + R N +
Sbjct: 277 PEGFKFFADQKLLTIFSAPRYMNETDNHGATLKVETNGRLSIGRLRNMK 325
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 232 SVWVALNPPGFAFIEFENLQEAEDACSAMNGIEMLGATLKVEISRKRDGP 381
S+ A P FEN A A S M + G T + S+ GP
Sbjct: 1004 SISAATTTPNVVVDAFENSSPAAPAVSTMEEVTPSGTTASISQSQPTPGP 1053
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 26.2 bits (55), Expect = 9.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 145 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPP-----GFAFIEFENLQEAEDA 306
G VY+ + K LE F +YG + SV + +P GFA I F++ A A
Sbjct: 24 GQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKA 82
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 148 TRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALN----PPGFAFIEFENLQEAEDACSA 315
++V+V + ++L+ F K+G + SV + P G AF++F+ A+ ++
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVAS 742
Query: 316 MNGIEMLGATLKVEIS 363
+ + + L+V +S
Sbjct: 743 GDKLMLRERELEVALS 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,295,137
Number of Sequences: 27780
Number of extensions: 162226
Number of successful extensions: 716
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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