Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D10
         (429 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.47 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.47 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   2.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.3  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 73  DMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADL 192
           D + +      G  L T  SDN  KIY++    Q  A D+
Sbjct: 101 DQLQERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDV 140


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 73  DMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADL 192
           D + +      G  L T  SDN  KIY++    Q  A D+
Sbjct: 101 DQLQERAQSVMGKCLPTSGSDNCNKIYNLAKCVQESAPDV 140


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 334 HESSVNSIAWAPAEYG 381
           HE   +   W PAEYG
Sbjct: 75  HEWQDHKFQWDPAEYG 90


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 82  VSYPHDPCRSYLE 44
           +SY HDP   YLE
Sbjct: 372 ISYIHDPDHRYLE 384


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,133
Number of Sequences: 438
Number of extensions: 3036
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)