Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D10
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 175 1e-44
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 169 7e-43
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 59 1e-09
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 59 1e-09
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 56 8e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 56 1e-08
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 54 4e-08
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 52 1e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 52 2e-07
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 52 2e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 51 4e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 51 4e-07
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 50 7e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 48 2e-06
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 48 4e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 48 4e-06
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 46 8e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 46 1e-05
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 46 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 45 2e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 45 3e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 44 4e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 44 6e-05
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 44 6e-05
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 44 6e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 43 1e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 1e-04
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 42 1e-04
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 42 1e-04
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 42 1e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 42 1e-04
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 42 1e-04
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 42 1e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 42 2e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 42 2e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 42 2e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 42 2e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 42 2e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 42 2e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 42 2e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 42 2e-04
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 42 2e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 41 3e-04
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 41 3e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 40 5e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 5e-04
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 40 7e-04
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 40 7e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 40 0.001
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 40 0.001
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 40 0.001
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 40 0.001
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 39 0.001
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 39 0.001
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 39 0.002
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 34 0.002
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.003
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 38 0.004
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 37 0.005
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 37 0.005
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 37 0.007
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 36 0.009
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.009
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.009
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.009
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 36 0.015
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.015
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 36 0.015
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 36 0.015
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 35 0.020
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 35 0.020
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 35 0.020
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 35 0.027
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 35 0.027
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 35 0.027
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 35 0.027
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 35 0.027
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 34 0.036
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.036
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.036
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 34 0.047
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 34 0.047
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 34 0.047
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 34 0.047
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.047
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 33 0.062
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 33 0.062
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 33 0.062
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 33 0.082
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 33 0.082
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 33 0.082
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 33 0.082
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 33 0.082
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 33 0.082
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.082
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.082
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 33 0.082
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.11
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.11
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 33 0.11
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 33 0.11
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.14
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 32 0.14
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 32 0.14
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 32 0.19
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 32 0.19
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 32 0.19
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 32 0.19
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 31 0.25
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 31 0.33
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 31 0.33
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 31 0.33
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.44
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 31 0.44
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 31 0.44
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 31 0.44
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 31 0.44
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.44
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 30 0.77
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 30 0.77
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 30 0.77
At3g01100.1 68416.m00015 early-responsive to dehydration protein... 30 0.77
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 30 0.77
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 29 1.0
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 29 1.0
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 29 1.0
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 29 1.3
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 29 1.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 1.3
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 29 1.3
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 29 1.3
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 29 1.3
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 29 1.3
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 1.3
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 29 1.8
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 1.8
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 28 3.1
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 28 3.1
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 27 4.1
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 27 4.1
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 27 4.1
At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related s... 27 5.4
At2g19650.1 68415.m02296 DC1 domain-containing protein contains ... 27 5.4
At2g04680.1 68415.m00478 DC1 domain-containing protein contains ... 27 5.4
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 27 7.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 27 7.1
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 27 7.1
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 27 7.1
At2g41870.1 68415.m05177 remorin family protein contains Pfam do... 27 7.1
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 27 7.1
At3g17500.1 68416.m02235 F-box family protein contains Pfam prof... 26 9.4
At1g78110.1 68414.m09103 expressed protein 26 9.4
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 26 9.4
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 26 9.4
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 175 bits (425), Expect = 1e-44
Identities = 79/127 (62%), Positives = 102/127 (80%), Gaps = 4/127 (3%)
Frame = +1
Query: 55 IDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKS--GTQTLAADLKGHFGPVWQVAW 228
I+TGHED++HD ++DYYG R+AT SSD ++KI + + G+Q LA L GH GPVW+VAW
Sbjct: 6 IETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLAT-LTGHRGPVWEVAW 64
Query: 229 AHPKYGNLLASCSYDRKVIIWKE--SGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSS 402
AHPKYG++LASCSYD +VI+WKE +WT+ H +T H+SSVNSIAWAP + GL+LAC S
Sbjct: 65 AHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGS 124
Query: 403 SDGSISV 423
SDG+ISV
Sbjct: 125 SDGNISV 131
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 115 LATCSSDNSVKIYDI-KSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
+A+ S D V I+ + K G Q LK PVW+V+W+ GNLLA + V +W
Sbjct: 229 IASGSQDGKVIIWTVGKEGEQWEGKVLKDFMTPVWRVSWS--LTGNLLAVSDGNNNVTVW 286
Query: 292 KES--GEWTKL 318
KE+ GEW ++
Sbjct: 287 KEAVDGEWEQV 297
Score = 42.3 bits (95), Expect = 1e-04
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 7/111 (6%)
Frame = +1
Query: 61 TGHEDMIHDAELDY--YGLRLATCSSDNSVKIYDIKSGTQ---TLAADLKGHFGPVWQVA 225
TGH + + + YG LA+CS D V ++ K G Q T H V +A
Sbjct: 53 TGHRGPVWEVAWAHPKYGSILASCSYDGQVILW--KEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 226 WAHPKYGNLLASCSYDRKVIIW--KESGEWTKLHEYTGHESSVNSIAWAPA 372
WA G LA S D + ++ + G W H V S++WAPA
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPA 161
Score = 38.7 bits (86), Expect = 0.002
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAA--DLKGHFGPVWQVAWAHPKYG---NLLASCSYDR 276
+LA+ DN+VK++ + +G+ + L+ H V VAWA P G + +AS S D
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWA-PNLGLPKSTIASGSQDG 236
Query: 277 KVIIW---KESGEW 309
KVIIW KE +W
Sbjct: 237 KVIIWTVGKEGEQW 250
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 169 bits (411), Expect = 7e-43
Identities = 78/129 (60%), Positives = 99/129 (76%), Gaps = 4/129 (3%)
Frame = +1
Query: 55 IDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKS--GTQTLAADLKGHFGPVWQVAW 228
I+TGH D IHD +DYYG R+AT SSD ++KI + + G+Q LA L GH GPVWQVAW
Sbjct: 6 IETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLAT-LTGHRGPVWQVAW 64
Query: 229 AHPKYGNLLASCSYDRKVIIWKE--SGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSS 402
AHPK+G+LLASCSYD ++I+WKE +WT+ H +T H+ SVNSIAWAP E GL+LAC +
Sbjct: 65 AHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGA 124
Query: 403 SDGSISVLA 429
SDG+ISV +
Sbjct: 125 SDGNISVFS 133
Score = 46.4 bits (105), Expect = 8e-06
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 115 LATCSSDNSVKIYDI-KSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
+A+ S D V I+ I K G Q LK PVW+V+W+ GNLLA + V +W
Sbjct: 229 IASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLT--GNLLAVSDGNNNVTVW 286
Query: 292 KES--GEWTKL 318
KES GEW ++
Sbjct: 287 KESVDGEWEQV 297
Score = 40.7 bits (91), Expect = 4e-04
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +1
Query: 61 TGHEDMIHDAELDY--YGLRLATCSSDNSVKIYDIKSGTQ---TLAADLKGHFGPVWQVA 225
TGH + + +G LA+CS D + ++ K G Q T A H V +A
Sbjct: 53 TGHRGPVWQVAWAHPKFGSLLASCSYDGQIILW--KEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 226 WAHPKYGNLLASCSYDRKVIIW--KESGEWTKLHEYTGHESSVNSIAWAPA 372
WA + G LA + D + ++ + G W H V S++WAPA
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPA 161
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 58.8 bits (136), Expect = 1e-09
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWA--- 231
TGH+ ++ + D G LA+CS D++ KI++IK T DL+ H ++ + W+
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ--STFVHDLREHTKEIYTIRWSPTG 502
Query: 232 ----HPKYGNLLASCSYDRKVIIW-KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLAC 396
+P LAS S+D V +W E G+ L + GH V S+A++P G +A
Sbjct: 503 PGTNNPNKQLTLASASFDSTVKLWDAELGK--MLCSFNGHREPVYSLAFSP--NGEYIAS 558
Query: 397 SSSDGSISV 423
S D SI +
Sbjct: 559 GSLDKSIHI 567
Score = 42.7 bits (96), Expect = 1e-04
Identities = 32/119 (26%), Positives = 51/119 (42%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H+ I + + G L T S D + ++D+K+ + + H GP V W +
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKA--EEWKQQFEFHSGPTLDVDWRN---N 418
Query: 247 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
A+ S D + + K GE +TGH+ VN + W P G LA S D + +
Sbjct: 419 VSFATSSTDSMIYLCK-IGETRPAKTFTGHQGEVNCVKWDPT--GSLLASCSDDSTAKI 474
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 58.8 bits (136), Expect = 1e-09
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVWQV 222
++T++ GHE+ + + G LATCS D SV I+++ G + AA L GH V V
Sbjct: 111 ISTLE-GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV 169
Query: 223 AWAHPKYGNLLASCSYDRKVIIW---KESGEW----TKLHEYTGHESSVNSIAWAPA 372
W HP ++L SCSYD + +W + GE+ T GH S+V SI++ A
Sbjct: 170 QW-HPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAA 224
Score = 53.2 bits (122), Expect = 7e-08
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADL---KGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
LA+CS DN+V+I++ S +++ + H V AW+ P G LLA+ S+D
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWS-PS-GQLLATASFDGTTG 99
Query: 286 IWKESG-EWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
IWK G E+ + GHE+ V S++W + G LA S D S+
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNAS--GSCLATCSRDKSV 142
Score = 49.6 bits (113), Expect = 9e-07
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQ 219
T ++ H + G LAT S D + I+ + L+GH V
Sbjct: 64 TCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKS 123
Query: 220 VAWAHPKYGNLLASCSYDRKVIIWK--ESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLA 393
V+W G+ LA+CS D+ V IW+ E E+ TGH V + W P + +
Sbjct: 124 VSW--NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT-MDVLFS 180
Query: 394 CSSSDGSISV 423
C S D +I V
Sbjct: 181 C-SYDNTIKV 189
Score = 49.2 bits (112), Expect = 1e-06
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Frame = +1
Query: 190 LKGHFGPVWQVAW----AHPK-YGNLLASCSYDRKVIIWKESG---EWT-KLHEYTGHES 342
L+GH VW VAW +H +LASCS D V IW++S WT K H
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 343 SVNSIAWAPAEYGLTLACSSSDGSISV 423
+V S AW+P+ G LA +S DG+ +
Sbjct: 76 TVRSCAWSPS--GQLLATASFDGTTGI 100
Score = 41.1 bits (92), Expect = 3e-04
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Frame = +1
Query: 37 ITVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIY--DI---KSGTQTLA----AD 189
+ L + GH + + G ++ TCS D ++KI+ DI +SG +
Sbjct: 202 VQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCT 261
Query: 190 LKG-HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTK--------LHEYTGHES 342
L G H ++ W+ +++AS + D + ++ +S + L + HE+
Sbjct: 262 LSGYHDRTIYSAHWSRD---DIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHEN 318
Query: 343 SVNSIAWAPAEYGLTLACSSSDGSISV 423
VNS+ W+P E LA +S DG + +
Sbjct: 319 DVNSVQWSPGEGNRLLASASDDGMVKI 345
Score = 27.9 bits (59), Expect = 3.1
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIY-DIKSGT------QTLAADLKGHF 204
L T+ H+ I+ A + +A+ + DN+++++ D K + L K H
Sbjct: 259 LCTLSGYHDRTIYSAHWSRDDI-IASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHE 317
Query: 205 GPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
V V W+ + LLAS S D V IW+
Sbjct: 318 NDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 56.4 bits (130), Expect = 8e-09
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADL--KGHFGPVWQVAWAHP 237
GH+ +H + G +LA+ S D + +I++I+ + A DL KGH V Q+ W P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW-DP 76
Query: 238 KYGNLLASCSYDRKVIIW-KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGS 414
K+ +L+A+ S D+ V +W SG+ T+ E +G ++N I + P G +A + D
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSG--ENIN-ITYKPD--GTHVAVGNRDDE 131
Query: 415 ISVL 426
+++L
Sbjct: 132 LTIL 135
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 322 EYTGHESSVNSIAWAPAEYGLTLACSSSD 408
EY GH+ V+S+AW G LA S D
Sbjct: 15 EYQGHKKKVHSVAW--NSNGTKLASGSVD 41
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 55.6 bits (128), Expect = 1e-08
Identities = 35/115 (30%), Positives = 54/115 (46%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH++++ + + G L T S D +K+YDI+ T +GH V +AW HP +
Sbjct: 308 GHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIR--TMKELQSFRGHTKDVTSLAW-HPCH 364
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
S S D + W E ++ H++SV +AW P Y L CS S+
Sbjct: 365 EEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGY---LLCSGSN 416
Score = 32.3 bits (70), Expect = 0.14
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYD-------------IKSGTQTLAADL--- 192
T H++ I D L+ +CS D +VK++D I G + +
Sbjct: 204 TAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPC 263
Query: 193 -KGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
GH V V W HP +LL S D+ V +W ++ +L GH++ V S+ W
Sbjct: 264 NAGHGWDVKSVDW-HPT-KSLLVSGGKDQLVKLW-DTRSGRELCSLHGHKNIVLSVKW 318
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 54.0 bits (124), Expect = 4e-08
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLR------LATCSSDNSVKIYDIKSGTQTLAADLKGHFG 207
L T H+ +H+ E++Y LAT SSD++V ++D++ T L L H G
Sbjct: 248 LRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV-LSKHEG 306
Query: 208 PVWQVAWAHPKYGNLLASCSYDRKVIIW---------------KESGEWTKLHEYTGHES 342
V+QV W P + +LAS DR++++W E G L + GH++
Sbjct: 307 EVFQVEW-DPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKA 365
Query: 343 SVNSIAWAPAEYGLTLACSSSDGSISV 423
++ AW E ++ + D S+ V
Sbjct: 366 KISDFAWNKDE-PWVISSVAEDNSLQV 391
Score = 39.1 bits (87), Expect = 0.001
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 190 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTK-----LHEYTGHESSVNS 354
L GH + +AW+ K G LL+ S D+++ +W S T +H Y GH+S +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSG-SQDQRICLWDVSATATDKVLNPMHVYEGHQSIIED 223
Query: 355 IAW 363
+AW
Sbjct: 224 VAW 226
Score = 30.3 bits (65), Expect = 0.58
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRL-ATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
GH+ +I D + + D + I+D++ T + +K H + +++ +P
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREINYLSF-NPF 272
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSIS 420
+LA+ S D V ++ LH + HE V + W P + LA S D +
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDP-NHETVLASSGEDRRLM 331
Query: 421 V 423
V
Sbjct: 332 V 332
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.4 bits (120), Expect = 1e-07
Identities = 31/103 (30%), Positives = 53/103 (51%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
TGH+ +++ G +A+ S D SV++++ +G +GH GPV+QV+W+
Sbjct: 357 TGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQ--FVTVFRGHVGPVYQVSWSAD- 413
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
LL S S D + IW+ + K + GH V ++ W+P
Sbjct: 414 -SRLLLSGSKDSTLKIWEIRTKKLK-QDLPGHADEVFAVDWSP 454
Score = 44.4 bits (100), Expect = 3e-05
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + + G +LA+ S D +V+++D+ T+T KGH V VAW+
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLY--TETPLFTCKGHKNWVLTVAWSPD-- 162
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYG---LTLACSSSDGS 414
G L S S ++ W + TGH+ + I+W P SS DG
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 415 ISV 423
+
Sbjct: 223 ARI 225
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 253 LASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
L S S D + +W+ S TGH+ VN + ++P G +A +S D S+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD--GKWIASASFDKSV 384
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.0 bits (119), Expect = 2e-07
Identities = 38/128 (29%), Positives = 60/128 (46%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQ 219
+V +TI+ G D + L L + ++++D++ T KGH GPV
Sbjct: 51 SVKSTIE-GESDTLTALALSPDDKLLFSAGHSRQIRVWDLE--TLKCIRSWKGHEGPVMG 107
Query: 220 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACS 399
+A H G LLA+ DRKV++W G + H + GH+ V+SI + P L
Sbjct: 108 MA-CHAS-GGLLATAGADRKVLVWDVDGGFC-THYFRGHKGVVSSILFHPDSNKNILISG 164
Query: 400 SSDGSISV 423
S D ++ V
Sbjct: 165 SDDATVRV 172
Score = 41.1 bits (92), Expect = 3e-04
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GHE + G LAT +D V ++D+ G T +GH G V + +
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHY--FRGHKGVVSSILFHPDSN 157
Query: 244 GNLLASCSYDRKVIIWKESGEWTK---LHEYTGHESSVNSIAWAPAEYGLTLACSSSDGS 414
N+L S S D V +W + + T+ L H S+V SIA +E GLTL + D
Sbjct: 158 KNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIAL--SEDGLTLFSAGRDKV 215
Query: 415 ISV 423
+++
Sbjct: 216 VNL 218
Score = 31.1 bits (67), Expect = 0.33
Identities = 25/99 (25%), Positives = 40/99 (40%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH+ I E + T S D +VKI+ I G + +GH V + ++
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG--SCLKTFEGHTSSVLRASFITD-- 594
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIA 360
G SC D + +W + + Y HE V ++A
Sbjct: 595 GTQFVSCGADGLLKLWNVNTS-ECIATYDQHEDKVWALA 632
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 51.6 bits (118), Expect = 2e-07
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 21/140 (15%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLR------LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAW 228
H+ +H+ E++Y LAT SSD++V ++D++ L + H G V+QV W
Sbjct: 254 HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHV-MSSHEGEVFQVEW 312
Query: 229 AHPKYGNLLASCSYDRKVIIW---------------KESGEWTKLHEYTGHESSVNSIAW 363
P + +LAS DR++++W E G L + GH++ ++ AW
Sbjct: 313 -DPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAW 371
Query: 364 APAEYGLTLACSSSDGSISV 423
E +A + D S+ V
Sbjct: 372 NKNE-PWVIASVAEDNSLQV 390
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = +1
Query: 160 KSGTQTLAADLK--GHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE-----WTKL 318
KS T DL+ GH + ++W+ K G LL+ S D+K+ +W S +
Sbjct: 152 KSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSG-SQDQKICLWDVSATPQDKVLNAM 210
Query: 319 HEYTGHESSVNSIAW 363
Y GHES++ ++W
Sbjct: 211 FVYEGHESAIADVSW 225
Score = 31.1 bits (67), Expect = 0.33
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRL-ATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
GHE I D L + D + I+D + T + +K H V +++ +P
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSF-NPF 271
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSIS 420
+LA+ S D V ++ LH + HE V + W P + LA S D +
Sbjct: 272 NEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDP-NHETVLASSGEDRRLM 330
Query: 421 V 423
V
Sbjct: 331 V 331
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 50.8 bits (116), Expect = 4e-07
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ---TLAADLKGHFGPVWQVAWAH 234
GHE + + G LATC D SV I++I+ A L GH V V W H
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW-H 148
Query: 235 PKYGNLLASCSYDRKVIIW---KESGEWT---KLHEY-TGHESSVNSIAWAPAEYGLTLA 393
P ++L SCSYD + IW E G++ L E GH S+V SI++ A G +
Sbjct: 149 PTM-DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAA--GDKMV 205
Query: 394 CSSSDGSISV 423
S D ++ +
Sbjct: 206 TCSDDLAVKI 215
Score = 43.6 bits (98), Expect = 6e-05
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 142 VKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESG---EWT 312
+K+ D G + + L+GH VW VAW +P ++ASCS D+ V IW++S WT
Sbjct: 1 MKVMDKNLGLEEVQK-LEGHTDRVWNVAW-NPAADGVIASCSADKTVRIWEQSSLTRSWT 58
Query: 313 -KLHEYTGHESSVNSIAW 363
KL G N+ W
Sbjct: 59 CKLGHRLGSFDG-NTCVW 75
Score = 35.5 bits (78), Expect = 0.015
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Frame = +1
Query: 37 ITVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIY--DI---KSG----TQTLAAD 189
+ L+ ++ GH + + G ++ TCS D +VKI+ DI +SG T
Sbjct: 178 VQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCT 237
Query: 190 LKG-HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES------GEWTKL--HEYTGHES 342
L G H ++ V W+ ++AS + D + ++ +S G KL + HE
Sbjct: 238 LSGFHDRTIYSVHWSR---DGVIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEM 294
Query: 343 SVNSIAWAP 369
VNS+ WAP
Sbjct: 295 DVNSVQWAP 303
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 313 KLHEYTGHESSVNSIAWAPAEYGLTLACSS 402
++ + GH V ++AW PA G+ +CS+
Sbjct: 12 EVQKLEGHTDRVWNVAWNPAADGVIASCSA 41
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 50.8 bits (116), Expect = 4e-07
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + D LA+ S DN+V I+++++G T L+GH V V W
Sbjct: 116 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTV--LRGHLSLVKGVTW--DPI 171
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGH-ESSVNS-----IAWAPAEYGLT 387
G+ +AS S D+ VIIW+ S +W H GH S+ S + W+P + LT
Sbjct: 172 GSFIASQSDDKTVIIWRTS-DWGMAHRTDGHWAKSLGSTFFRRLGWSPCGHFLT 224
Score = 31.5 bits (68), Expect = 0.25
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Frame = +1
Query: 67 HEDM-IHDAELDYYGLRLATCSSDNSVKIYDIKS--GTQTLAADLKGHFGPVWQVAWAHP 237
HE + I ++ G R AT D+ D+++ + L A L+ HFG V V WA
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWA-- 68
Query: 238 KYGNLLASCSYDRKVIIWKE----------SGE------WTKLHEYTGHESSVNSIAWAP 369
K +AS S D+ + I + SGE W + GH + V + W+P
Sbjct: 69 KNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSP 128
Query: 370 AEYGLTLACSSSDGSISV 423
+ LA S D ++ +
Sbjct: 129 DD--SMLASGSLDNTVHI 144
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 50.0 bits (114), Expect = 7e-07
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +1
Query: 190 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
L+GH + V +++ GNLLAS S D+ +I+W + ++ +H Y GH S ++ +AW+
Sbjct: 39 LEGHTAAISCVKFSND--GNLLASASVDKTMILWSATN-YSLIHRYEGHSSGISDLAWSS 95
Query: 370 AEYGLTLACSSSD 408
+ CS+SD
Sbjct: 96 DSH---YTCSASD 105
Score = 37.1 bits (82), Expect = 0.005
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH I D + S D +++I+D +S + L L+GH V+ V + P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV-LRGHTNFVFCVNFNPPS- 140
Query: 244 GNLLASCSYDRKVIIWK-ESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSIS 420
NL+ S S+D + IW+ ++G+ ++ H ++S+ + G + +S DGS
Sbjct: 141 -NLIVSGSFDETIRIWEVKTGKCVRM--IKAHSMPISSVHF--NRDGSLIVSASHDGSCK 195
Query: 421 V 423
+
Sbjct: 196 I 196
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 48.4 bits (110), Expect = 2e-06
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + DA+ +G A+CS D + +I+ + Q L + GH V W HP
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSM-DRIQPLRI-MAGHLS---DVDW-HPNC 511
Query: 244 GNLLASCSYDRKVIIWK-ESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
N +A+ S D+ V +W ++GE ++ + GH S V S+A +P G +A DG+I
Sbjct: 512 -NYIATGSSDKTVRLWDVQTGECVRI--FIGHRSMVLSLAMSPD--GRYMASGDEDGTI 565
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW- 291
+AT S+D +VK++D++ T H V+QV W +PK +LASC R++++W
Sbjct: 289 VATGSTDKTVKLFDLRK-LSTALHTFDSHKEEVFQVGW-NPKNETILASCCLGRRLMVWD 346
Query: 292 ------------KESGEWTKLHEYTGHESSVNSIAWAPAE 375
E G L + GH S ++ +W P E
Sbjct: 347 LSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCE 386
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 190 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-----KESGEWTKLHEYTGHESSVNS 354
L+GH + ++W+ K G+LL S S D ++ +W ++ + HE V
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLL-SGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 355 IAW 363
+AW
Sbjct: 233 VAW 235
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 47.6 bits (108), Expect = 4e-06
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LAT S D +VK++D++S LA L GH V +V ++ P +L+ASCSYD V +W
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAV-LNGHGYAVRKVKFS-PHRRSLIASCSYDMSVCLWD 265
Query: 295 ESGEWTKLHEYTGH 336
E + Y H
Sbjct: 266 YMVEDALVGRYDHH 279
Score = 37.1 bits (82), Expect = 0.005
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 103 YGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGN-LLASCSYDRK 279
+G A+ S D +++I+D++ T+ + H + W KY + +LA+ S D+
Sbjct: 161 HGDVFASASGDCTLRIWDVREPGSTMI--IPAHDFEILSCDWN--KYDDCILATSSVDKT 216
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACS 399
V +W L GH +V + ++P L +CS
Sbjct: 217 VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCS 256
Score = 33.9 bits (74), Expect = 0.047
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +1
Query: 121 TCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW--K 294
T S D++VK++ + K H V+Q W +PK+G++ AS S D + IW +
Sbjct: 124 TSSWDDTVKLWAMDRPASVRT--FKEHAYCVYQAVW-NPKHGDVFASASGDCTLRIWDVR 180
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
E G T + H+ + S W + LA SS D ++ V
Sbjct: 181 EPGS-TMI--IPAHDFEILSCDWNKYD-DCILATSSVDKTVKV 219
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 46.4 bits (105), Expect = 8e-06
Identities = 37/120 (30%), Positives = 56/120 (46%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH+D + Y G LA+ D V+I+D SGT D G G W V W HP+
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG-AGIEW-VRW-HPR- 166
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
G+++ + S D + +W E L+ ++GH +V + P G + S D S+ V
Sbjct: 167 GHIVLAGSEDCSLWMWNADKE-AYLNMFSGHNLNVTCGDFTPD--GKLICTGSDDASLIV 223
Score = 31.1 bits (67), Expect = 0.33
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGN--LLASCSYDRKVIIWKES 300
S D SV I +I +G + + L H V V ++ P L A+ D+K+IIW
Sbjct: 261 SKDGSVHIVNIVTGK--VVSSLNSHTDSVECVKFS-PSSATIPLAATGGMDKKLIIWDLQ 317
Query: 301 GEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
+ HE V S+ W L C++ SI
Sbjct: 318 HSTPRF--ICEHEEGVTSLTWIGTSKYLATGCANGTVSI 354
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 46.0 bits (104), Expect = 1e-05
Identities = 33/115 (28%), Positives = 56/115 (48%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + ++ A D G + T S D VKI+ ++ T A +GH G + +A +
Sbjct: 303 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME--TALCLASCRGHEGDITDLAVS--SN 358
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
L+AS S D + +W+ + + GH +V +IA++P + + SSSD
Sbjct: 359 NALVASASNDFVIRVWR-LPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSD 412
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 46.0 bits (104), Expect = 1e-05
Identities = 30/98 (30%), Positives = 45/98 (45%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + G LA+ DN +I+D++ + H V QV + P+
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI--IPAHANLVSQVKY-EPQE 477
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
G LA+ SYD KV IW +++ + GHES V S+
Sbjct: 478 GYFLATASYDMKVNIW-SGRDFSLVKSLAGHESKVASL 514
Score = 44.8 bits (101), Expect = 3e-05
Identities = 32/123 (26%), Positives = 58/123 (47%)
Frame = +1
Query: 55 IDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAH 234
+ GH ++ G A+C D+ +++D+++G L +GH PV+ V ++
Sbjct: 376 LQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV--FQGHIKPVFSVNFS- 432
Query: 235 PKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGS 414
P G LAS D + IW + L+ H + V+ + + P E G LA +S D
Sbjct: 433 PN-GYHLASGGEDNQCRIW-DLRMRKSLYIIPAHANLVSQVKYEPQE-GYFLATASYDMK 489
Query: 415 ISV 423
+++
Sbjct: 490 VNI 492
Score = 44.0 bits (99), Expect = 4e-05
Identities = 33/115 (28%), Positives = 53/115 (46%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQ 219
T+L T + GH D + G L T S D + +++DI +G + L + GH V+
Sbjct: 330 TLLQTFE-GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE--GHSRSVYG 386
Query: 220 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGL 384
+A+ G L ASC D +W + + + GH V S+ ++P Y L
Sbjct: 387 IAFQQD--GALAASCGLDSLARVW-DLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Score = 26.6 bits (56), Expect = 7.1
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKV 282
G LAT S D V I+ SG +L L GH V + + +A+ S+DR +
Sbjct: 478 GYFLATASYDMKVNIW---SGRDFSLVKSLAGHESKVASLDITADS--SCIATVSHDRTI 532
Query: 283 IIWKESG 303
+W SG
Sbjct: 533 KLWTSSG 539
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES 300
S D++V YD+ T L+GH PV VAW H + NLLAS + VI+WK +
Sbjct: 423 SEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGE--NLLASSDFYGVVIVWKRA 478
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 44.8 bits (101), Expect = 3e-05
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLR-LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
GHED + D + + D+ + ++D ++GT + K H + V W +P
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDW-NPH 348
Query: 241 YGNLLASCSYDRKVIIWKE-----SGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSS 405
NL+ + S D V ++ +G + ++++ GH+++V + W+P + S+
Sbjct: 349 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP-DKSSVFGSSAE 407
Query: 406 DGSISV 423
DG +++
Sbjct: 408 DGLLNI 413
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 44.0 bits (99), Expect = 4e-05
Identities = 34/119 (28%), Positives = 55/119 (46%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
TGH E +G LA+ SSD ++KI+DI+ + KGH + + +
Sbjct: 97 TGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK--KGCIQTYKGHSRGISTIRFTPD- 153
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G + S D V +W + LHE+ HE + S+ + P E+ LA S+D ++
Sbjct: 154 -GRWVVSGGLDNVVKVW-DLTAGKLLHEFKFHEGPIRSLDFHPLEF--LLATGSADRTV 208
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 43.6 bits (98), Expect = 6e-05
Identities = 31/98 (31%), Positives = 47/98 (47%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEW 309
+D S++I+D + GT + H G V A + K G++LAS S D +I+W GE
Sbjct: 84 ADGSIRIWDTEKGT--CEVNFNSHKGAV--TALRYNKVGSMLASGSKDNDIILWDVVGE- 138
Query: 310 TKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
+ L GH V + + + G L SS D + V
Sbjct: 139 SGLFRLRGHRDQVTDLVF--LDGGKKLVSSSKDKFLRV 174
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G LA+ D++VKI D ++G L GH W V + HP++ ++AS S D +V
Sbjct: 115 GRTLASTHGDHTVKIIDCETGK--CLKILTGHRRTPWVVRF-HPRHSEIVASGSLDHEVR 171
Query: 286 IWK-ESGEWTKLHEY 327
+W ++GE + H++
Sbjct: 172 LWNAKTGECIRTHDF 186
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 43.6 bits (98), Expect = 6e-05
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G LA+ D++VKI D ++G L GH W V + HP++ ++AS S D +V
Sbjct: 115 GRTLASTHGDHTVKIIDCETGK--CLKILTGHRRTPWVVRF-HPRHSEIVASGSLDHEVR 171
Query: 286 IWK-ESGEWTKLHEY 327
+W ++GE + H++
Sbjct: 172 LWNAKTGECIRTHDF 186
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +1
Query: 55 IDTGHEDMIHD-AELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWA 231
I GH+D + D A + D+ + ++D ++GT K H + V W
Sbjct: 276 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDW- 334
Query: 232 HPKYGNLLASCSYDRKVIIWKE-----SGEWTKLHEYTGHESSVNSIAWAPAEYGLTLAC 396
+P NL+ + S D V ++ +G + ++++ GH ++V + W+P +
Sbjct: 335 NPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSP-DKSSVFGS 393
Query: 397 SSSDGSISV 423
S+ DG +++
Sbjct: 394 SAEDGLLNI 402
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/90 (28%), Positives = 45/90 (50%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L++ S D S+ DI++ + + LKGH + + W+ LAS D K+ +W
Sbjct: 264 LSSGSRDKSILQRDIRT-QEDHVSKLKGHKSEICGLKWSSDN--RELASGGNDNKLFVWN 320
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAPAEYGL 384
+ L + H ++V +IAW+P +GL
Sbjct: 321 QHSTQPVLR-FCEHAAAVKAIAWSPHHFGL 349
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVW 216
+V+ T H+ +HD + A+ S+D SV+I+D++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 217 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
++AW + KV+I + E H++SVN+IAWAP
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
Score = 31.9 bits (69), Expect = 0.19
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
RL TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 292 --KESGEWTKLHEYTGHESSVNSIAW 363
++ T ++E ++ + +AW
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAW 227
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVW 216
+V+ T H+ +HD + A+ S+D SV+I+D++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 217 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
++AW + KV+I + E H++SVN+IAWAP
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
Score = 31.9 bits (69), Expect = 0.19
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
RL TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 292 --KESGEWTKLHEYTGHESSVNSIAW 363
++ T ++E ++ + +AW
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAW 227
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 42.3 bits (95), Expect = 1e-04
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVW 216
+V+ T H+ +HD + A+ S+D SV+I+D++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 217 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
++AW + KV+I + E H++SVN+IAWAP
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAP 274
Score = 31.9 bits (69), Expect = 0.19
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
RL TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 292 --KESGEWTKLHEYTGHESSVNSIAW 363
++ T ++E ++ + +AW
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAW 227
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES--G 303
SD+ + I S T + L+ H VW + ++H G LAS S D+ IIW+ S G
Sbjct: 253 SDHQCGKHQIPSQTAQI---LESHTDEVWFLQFSHN--GKYLASSSKDQTAIIWEISADG 307
Query: 304 EWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ H GH V +I W+P + + L C + +
Sbjct: 308 HISLKHTLVGHHKPVIAILWSPDDRQV-LTCGAEE 341
Score = 42.3 bits (95), Expect = 1e-04
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +1
Query: 70 EDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGN 249
EDMI L + + +++++I+ G + + KGH + + Y
Sbjct: 443 EDMITSFSLSNDNKYILVNLLNQEIRLWNIE-GDPKIVSRYKGHKRSRFIIRSCFGGYKQ 501
Query: 250 -LLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
+AS S D +V IW S + E GH +VN ++W+P + LA +S DG+I +
Sbjct: 502 AFIASGSEDSQVYIWHRS-TGKLIVELPGHAGAVNCVSWSPTNLHM-LASASDDGTIRI 558
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 42.3 bits (95), Expect = 1e-04
Identities = 27/104 (25%), Positives = 47/104 (45%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G L + + + +Y + ++ H G V +A+AHP + +C D+ +
Sbjct: 421 GNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIK 480
Query: 286 IWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
+W SG+ KL + GHE+ V SI E + ++ DG I
Sbjct: 481 VWDLSGK--KLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKI 522
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 42.3 bits (95), Expect = 1e-04
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTL-AADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 288
RL + + + +++ SG+ + GH V + W+ P N+ ASCS D V +
Sbjct: 238 RLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWS-PAEENVFASCSVDGSVAV 296
Query: 289 WKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
W + + H + VN I+W LA S DG+ S+
Sbjct: 297 WDIRLGKSPALSFKAHNADVNVISWNRLA-SCMLASGSDDGTFSI 340
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +1
Query: 172 QTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE-SGEWT-KLHEYTGHESS 345
Q + GH + + W+ G LL+ + +W+ SG W + GH +S
Sbjct: 213 QAPLVNFSGHKDEGYAIDWSPATAGRLLSG-DCKSMIHLWEPASGSWAVDPIPFAGHTAS 271
Query: 346 VNSIAWAPAEYGLTLACSSSDGSISV 423
V + W+PAE + +C S DGS++V
Sbjct: 272 VEDLQWSPAEENVFASC-SVDGSVAV 296
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 41.9 bits (94), Expect = 2e-04
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + ++ A LD G + T S D VK++ + T A +GH G + +A +
Sbjct: 243 GHRNAVYCAILDRSGRYVITGSDDRLVKVWSM--DTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYG-LTLACSSSDGSIS 420
+AS S D + +W+ + + GH +V +IA++P L SS DG+
Sbjct: 301 --FIASASNDCVIRVWR-LPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCR 357
Query: 421 V 423
+
Sbjct: 358 I 358
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H +I D +LAT S D ++KI+D L + GH PV + + HPK
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 606
Query: 247 NLLASCSYDRKVIIW 291
LL SC + + W
Sbjct: 607 ELLCSCDSNNDIRFW 621
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 609 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 660
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP 369
+++ + GH S+V+S+ W+P
Sbjct: 661 IENNNKRVNIFKGHSSNVHSVCWSP 685
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +1
Query: 100 YYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 518 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 573
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ IW S L +GH + V SI + P + L +C S++
Sbjct: 574 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 616
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H +I D +LAT S D ++KI+D L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 247 NLLASCSYDRKVIIW 291
LL SC + + W
Sbjct: 609 ELLCSCDSNNDIRFW 623
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP 369
+++ + GH S+V+S+ W+P
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP 687
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +1
Query: 100 YYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ IW S L +GH + V SI + P + L +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H +I D +LAT S D ++KI+D L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 247 NLLASCSYDRKVIIW 291
LL SC + + W
Sbjct: 609 ELLCSCDSNNDIRFW 623
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP 369
+++ + GH S+V+S+ W+P
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP 687
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +1
Query: 100 YYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ IW S L +GH + V SI + P + L +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H +I D +LAT S D ++KI+D L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 247 NLLASCSYDRKVIIW 291
LL SC + + W
Sbjct: 609 ELLCSCDSNNDIRFW 623
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP 369
+++ + GH S+V+S+ W+P
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP 687
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +1
Query: 100 YYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ IW S L +GH + V SI + P + L +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H +I D +LAT S D ++KI+D L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 247 NLLASCSYDRKVIIW 291
LL SC + + W
Sbjct: 609 ELLCSCDSNNDIRFW 623
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP 369
+++ + GH S+V+S+ W+P
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP 687
Score = 35.5 bits (78), Expect = 0.015
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = +1
Query: 100 YYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 280 VIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ IW S L +GH + V SI + P + L +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/90 (28%), Positives = 46/90 (51%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L++ S D S+ DI+ + + L GH V + W++ LAS D ++ +W
Sbjct: 307 LSSGSRDKSILQRDIRC-QEDHVSKLAGHKSEVCGLKWSYDN--RELASGGNDNRLFVWN 363
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAPAEYGL 384
+ L +Y+ H ++V +IAW+P +GL
Sbjct: 364 QHSTQPVL-KYSEHTAAVKAIAWSPHVHGL 392
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + + G LA+ DN +I+D++ + L + H V QV + P+
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR--MRKLLYIIPAHVNLVSQVKY-EPQE 226
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
LA+ S+D V IW +++ + GHES V S+
Sbjct: 227 RYFLATASHDMNVNIW-SGRDFSLVKSLVGHESKVASL 263
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 41.5 bits (93), Expect = 2e-04
Identities = 31/119 (26%), Positives = 55/119 (46%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
TGH E +G LA+ SSD +++++D + + KGH + + ++
Sbjct: 46 TGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK--KGCIQTYKGHTRGISTIEFSPD- 102
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G + S D V +W + LHE+ HE + S+ + P E+ LA S+D ++
Sbjct: 103 -GRWVVSGGLDNVVKVW-DLTAGKLLHEFKCHEGPIRSLDFHPLEF--LLATGSADRTV 157
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.1 bits (92), Expect = 3e-04
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LA+ S+D VK++D+ +GT + ++ H V VAW H +L S S+D+ V++ K
Sbjct: 249 LASASADKKVKVWDVATGTCKIT--MEHHTKEVQAVAWNH-YAPEVLLSGSFDQTVVL-K 304
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP-AEYGLTLACSSSDGSI 417
+ + + S V S+AW P +E+ + S DG++
Sbjct: 305 DGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVV--SLEDGTV 344
Score = 33.1 bits (72), Expect = 0.082
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 199 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
H V +AW + ++ N+LAS S D+KV +W + K+ H V ++AW
Sbjct: 232 HTRSVLGLAW-NKEFRNILASASADKKVKVWDVATGTCKI-TMEHHTKEVQAVAW 284
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 41.1 bits (92), Expect = 3e-04
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGH----ESSVNSIAWAPAEYGLTLACSSSDG 411
G+ LA+ S + K+ I++ S + T ESS+ I W P+EYG +AC DG
Sbjct: 21 GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80
Query: 412 SISV 423
S+S+
Sbjct: 81 SLSI 84
Score = 34.3 bits (75), Expect = 0.036
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIK---SGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDR 276
G RLA S + + IY+ S T + + ++ + ++ W +YG+ +A D
Sbjct: 21 GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80
Query: 277 KVIIWKESG------EWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
+ IW+E EW S V + + + L + + SDG + V
Sbjct: 81 SLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRV 135
Score = 34.3 bits (75), Expect = 0.036
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 184 ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE--SGEW 309
+ L GH G VWQ+ W G LAS D V +W+ +GEW
Sbjct: 274 SSLSGHQGEVWQMEW--DMSGMTLASTGSDGMVKLWQSNLNGEW 315
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.3 bits (90), Expect = 5e-04
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LA+ S+D VK++D+ +GT + ++ H V VAW H +L S S+D+ V++ K
Sbjct: 281 LASASADKKVKVWDVATGTCKIT--MEHHTKEVQAVAWNH-YAPEVLLSGSFDQTVVM-K 336
Query: 295 ESGEWTKLHEYTGHESSVNSIAWAP-AEYGLTLACSSSDGSI 417
+ + + S V S+AW P E+ + S DG++
Sbjct: 337 DGRQPSHSGFKWSVMSDVESLAWDPHCEHSFVV--SLEDGTV 376
Score = 33.1 bits (72), Expect = 0.082
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 199 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
H V +AW + ++ N+LAS S D+KV +W + K+ H V ++AW
Sbjct: 264 HTESVLGLAW-NKEFRNILASASADKKVKVWDVATGTCKI-TMEHHTKEVQAVAW 316
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWA 231
LAT S D SVK++D+ + + A + + G V+ +++A
Sbjct: 420 LATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFA 458
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 40.3 bits (90), Expect = 5e-04
Identities = 33/99 (33%), Positives = 46/99 (46%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S+D VKI+D L A LKGH G V ++ K + S S D VI+W +
Sbjct: 874 STDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGK----IVSGSDDLSVIVW-DKQT 928
Query: 307 WTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
L E GH+S V+ + E LT A DG++ +
Sbjct: 929 TQLLEELKGHDSQVSCVKMLSGERVLTAA---HDGTVKM 964
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 39.9 bits (89), Expect = 7e-04
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +1
Query: 43 VLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFG-PVWQ 219
V++T H+ ++D G+ A+ S D SV+++D++ + G P+ +
Sbjct: 169 VVDTQLIAHDKEVYDIAWGGVGV-FASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVR 227
Query: 220 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACS 399
++W + K+++ + E H++SVN+IAWAP + + CS
Sbjct: 228 LSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAP--HSSSHICS 285
Query: 400 SSDGSISVL 426
+ D S +++
Sbjct: 286 AGDDSQALI 294
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 39.9 bits (89), Expect = 7e-04
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +1
Query: 133 DNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWT 312
D + +Y I + T A L+ H G + + ++ P ++ AS +R+ ++W
Sbjct: 468 DGKLHLYSINGDSLTEEAVLERHRGAISVIRYS-PDL-SMFASADLNREAVVWDRVSREM 525
Query: 313 KLHEYTGHESSVNSIAWAP 369
KL H + +N +AW+P
Sbjct: 526 KLKNMLYHSARINCLAWSP 544
Score = 33.5 bits (73), Expect = 0.062
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Frame = +1
Query: 58 DTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIK---SGTQTLAADLKGHFGPVWQVAW 228
D GH+ I+ G ++ T S+D S KI+DI SG+ + G G V +
Sbjct: 228 DDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLV 287
Query: 229 AHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIA 360
+ + + S + I+ S +++GH +V+S+A
Sbjct: 288 GCLWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLA 331
Score = 27.1 bits (57), Expect = 5.4
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
R+ TC D V Y+ L++ + H V V +A G+ + S D+K II+
Sbjct: 159 RIVTCGEDFLVNFYEGPPFKFKLSS--REHSNFVNCVRFAPD--GSKFITVSSDKKGIIY 214
Query: 292 --KESGEWTKLHEYTGHESSVNSIAWAP-AEYGLTLACSSS 405
K +L GH+ S+ +++W+P + LT++ S
Sbjct: 215 DGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKS 255
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 39.5 bits (88), Expect = 0.001
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLR---LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAH 234
GH M+ LD++ ++ + +C +DN ++ + I +G+ T + + G Q+ +
Sbjct: 734 GHSSMV--TSLDFHPIKDDLICSCDNDNEIRYWSINNGSCT-----RVYKGGSTQIRF-Q 785
Query: 235 PKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
P+ G LA+ S + ++ E+ H GH + +NS+ W P+ G LA S D
Sbjct: 786 PRVGKYLAASSANLVNVLDVETQAIR--HSLQGHANPINSVCWDPS--GDFLASVSED 839
Score = 35.5 bits (78), Expect = 0.015
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 253 LASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
LA+ S+D+ V +W + L + GH S V S+ + P + L +C + +
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDN 759
Score = 31.1 bits (67), Expect = 0.33
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
G +LAS +D+K ++W K H + + I ++P++ L LA SS D ++ V
Sbjct: 663 GKMLASAGHDKKAVLWYTDTMKPKT-TLEEHTAMITDIRFSPSQ--LRLATSSFDKTVRV 719
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G R+ + S DN V ++++ S + L L+GH V VA HP NL+AS S D+ V
Sbjct: 255 GKRIVSGSEDNCVHMWELNS--KKLLQKLEGHTETVMNVA-CHPTE-NLIASGSLDKTVR 310
Query: 286 IWKESGE 306
IW + E
Sbjct: 311 IWTQKKE 317
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
L S + V IY G ++ H G V +A++ P + +C D+ + +W
Sbjct: 434 LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Query: 292 KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
++ KLH + GHE+ V S+ E + ++ DG I
Sbjct: 494 -DAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKI 534
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
L S + V IY G ++ H G V +A++ P + +C D+ + +W
Sbjct: 434 LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Query: 292 KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
++ KLH + GHE+ V S+ E + ++ DG I
Sbjct: 494 -DAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKI 534
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G LA+ SSD SV +YD KS L LK + P V++ HP N++A+CS++ +V
Sbjct: 398 GETLASGSSDGSVYMYDYKS--TALIKKLKAYEQPCVNVSY-HPVLPNVVAACSWNGQVS 454
Query: 286 IWK 294
+++
Sbjct: 455 VFE 457
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 39.1 bits (87), Expect = 0.001
Identities = 36/125 (28%), Positives = 56/125 (44%)
Frame = +1
Query: 43 VLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQV 222
V+ T+ TGH +G A+ S D ++KI+DI+ + KGH V V
Sbjct: 186 VVRTL-TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NV 241
Query: 223 AWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSS 402
P G + S D V +W + LHE+ HE + S+ + P E+ LA S
Sbjct: 242 LRFTPD-GRWIVSGGEDNVVKVWDLTAG-KLLHEFKSHEGKIQSLDFHPHEF--LLATGS 297
Query: 403 SDGSI 417
+D ++
Sbjct: 298 ADKTV 302
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 38.7 bits (86), Expect = 0.002
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
+ T+ GHE + D + L T D + D++ + + L GH V +
Sbjct: 203 VRTLRGGHESRVGSLAWDNH--ILTTGGMDGKIVNNDVRIRSSIVETYL-GHTEEVCGLK 259
Query: 226 WAHPKYGNLLASCSYDRKVIIW-------KESGEWTKLHEYTGHESSVNSIAWAPAEYGL 384
W+ GN AS D V IW K++ +W LH + H ++V ++AW P + L
Sbjct: 260 WSES--GNKQASGGNDNVVHIWDRSLASSKQTRQW--LHRFEEHTAAVRALAWCPFQASL 315
Score = 31.1 bits (67), Expect = 0.33
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +1
Query: 94 LDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 273
LD+ + + ++V ++D SG+ + + GPV + W G LA +
Sbjct: 132 LDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQD--GLDLAVGLDN 189
Query: 274 RKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
+V +W GHES V S+AW
Sbjct: 190 SEVQLWDCVSNRQVRTLRGGHESRVGSLAW 219
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 33.9 bits (74), Expect(2) = 0.002
Identities = 26/84 (30%), Positives = 39/84 (46%)
Frame = +1
Query: 172 QTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVN 351
+T +L GH G V +AW+ NLL S S D+ V +W+ +G LH + H + V
Sbjct: 262 ETPFQELYGHTGDVLDLAWSD---SNLLLSASKDKTVRLWR-TGCDQCLHVF-HHNNYVT 316
Query: 352 SIAWAPAEYGLTLACSSSDGSISV 423
+ + P A S DG +
Sbjct: 317 CVEFNPVNKN-NFASGSIDGKARI 339
Score = 23.4 bits (48), Expect(2) = 0.002
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLK 195
GH+ I + G LAT D VKI+ I LA+ L+
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLR 239
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.9 bits (84), Expect = 0.003
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +1
Query: 37 ITVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAAD--LKGHFGP 210
+ +L+ ID G + + + G D + IY + SG L + L+ H G
Sbjct: 302 LNILSKIDLGFA--VAASVISPDGKEAIVGGQDGKLHIYSV-SGDNNLKEEAVLEKHRGA 358
Query: 211 VWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
+ + ++ P + AS +R+ ++W + KL+ H + +NS+AW+P
Sbjct: 359 LTVIRYS-PDL-TMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSP 409
Score = 35.9 bits (79), Expect = 0.012
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQT--LAADLKGHFGPVWQVAWAHPK 240
H + ++ G + T SSD IYD K+G + LA++ GH G ++ V+W+ P
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASE-DGHKGSIYAVSWS-PD 107
Query: 241 YGNLLASCSYDRKVIIWKESGEWT 312
+L + S D+ +W+ + + T
Sbjct: 108 SKRVL-TVSADKSAKVWEVAEDGT 130
Score = 28.3 bits (60), Expect = 2.3
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
R+ATC D V YD + + H V + ++ G + S D+K +I+
Sbjct: 23 RIATCGEDFLVNFYD--GPPFKFHSSHREHSNFVNCIRYSPD--GTKFITVSSDKKGMIY 78
Query: 292 --KESGEWTKLHEYTGHESSVNSIAWAP-AEYGLTLACSSS 405
K + +L GH+ S+ +++W+P ++ LT++ S
Sbjct: 79 DGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKS 119
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 37.5 bits (83), Expect = 0.004
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLA-TCSSDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHP 237
GH D +++ +L T S D SV+++++++G L A GH V V + HP
Sbjct: 126 GHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDF-HP 184
Query: 238 KYGNLLASCSYDRKVIIWKESGEWT 312
ASC D + IW WT
Sbjct: 185 SDIYRFASCGMDTTIKIWSMKEFWT 209
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +1
Query: 160 KSGTQTLAAD---LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYT 330
K+ T +L A L GH V+ + + +P G L+AS S+DR++ +W+ G+
Sbjct: 36 KNRTSSLEAPIMLLSGHPSAVYTMKF-NPA-GTLIASGSHDREIFLWRVHGDCKNFMVLK 93
Query: 331 GHESSVNSIAW 363
GH++++ + W
Sbjct: 94 GHKNAILDLHW 104
Score = 36.3 bits (80), Expect = 0.009
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKS-GTQTLAADL-KGH---FGP-VWQVA 225
GH+D I L G L T DN + ++D++ Q + +GH F + + +
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 226 WAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSS 402
W+ G + + S DR V IW + T +++ GH SVN + P E + +CSS
Sbjct: 280 WSPD--GTKVTAGSSDRMVHIWDTTSRRT-IYKLPGHTGSVNECVFHPTE-PIIGSCSS 334
Score = 32.3 bits (70), Expect = 0.14
Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
++ T DN VK++D++ G T+ L+GH + ++ + G+ L + D K+ +W
Sbjct: 194 KIFTGGVDNDVKVWDLRKGEATMT--LEGHQDTITGMSLSPD--GSYLLTNGMDNKLCVW 249
Query: 292 -----KESGEWTKLHEYTGH--ESSVNSIAWAPAEYGLTLACSSSDGSISV 423
K+ E H E ++ +W+P G + SSD + +
Sbjct: 250 DMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD--GTKVTAGSSDRMVHI 298
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 37.1 bits (82), Expect = 0.005
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ-TLAADLKGHFGPVWQVAW--AHP 237
H+ + D G+ A+ S+D SV+++D++ T+ + P+ ++ W P
Sbjct: 177 HDKEVFDIAWGGVGV-FASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDP 235
Query: 238 KYGNLLASCSYDR-KVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGS 414
+Y +A+ D KV++ + E H++SVN+IAWAP + C++ D S
Sbjct: 236 RY---MATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAP--HSSCHICTAGDDS 290
Query: 415 ISVL 426
+++
Sbjct: 291 QALI 294
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 36.7 bits (81), Expect = 0.007
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
G LA+ D++VKI D ++G L GH W V + HP + ++AS S D +V
Sbjct: 118 GRTLASTHGDHTVKIIDCETGNCLKV--LTGHRRTPWVVRF-HPHHSEIVASGSLDLEVR 174
Query: 286 IW 291
+W
Sbjct: 175 LW 176
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 36.3 bits (80), Expect = 0.009
Identities = 27/97 (27%), Positives = 40/97 (41%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
HE +Y L T D +VK++D SG TL L G G + +A H
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSG--TLIKSLYGSLGNILDMAVTHDNKS 287
Query: 247 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
+ A+ S + +W S + H TGH V ++
Sbjct: 288 VIAATSS--NNLFVWDVSSGRVR-HTLTGHTDKVCAV 321
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 36.3 bits (80), Expect = 0.009
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
+ T+ GHE + L + L T D + D++ + + + GH V +
Sbjct: 187 VRTLRGGHESRV--GSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYV-GHTEEVCGLK 243
Query: 226 WAHPKYGNLLASCSYDRKVIIWKES-------GEWTKLHEYTGHESSVNSIAWAPAEYGL 384
W+ G LAS D V IW S +W LH + H ++V ++AW P + L
Sbjct: 244 WSES--GKKLASGGNDNVVHIWDRSLASSNPTRQW--LHRFEEHTAAVRALAWCPFQASL 299
Query: 385 TLACSS-SDGSIS 420
DG I+
Sbjct: 300 LATGGGVGDGKIN 312
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 36.3 bits (80), Expect = 0.009
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 94 LDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 273
LD+ + + D++V ++D +G+ + + GPV + WA G +A +
Sbjct: 146 LDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNN 203
Query: 274 RKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
+V +W + GH+S V S+AW
Sbjct: 204 SEVQLWDSASNRQLRTLKGGHQSRVGSLAW 233
Score = 35.5 bits (78), Expect = 0.015
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
L T+ GH+ + L + L T D + D++ + + +GH V +
Sbjct: 217 LRTLKGGHQSRV--GSLAWNNHILTTGGMDGLIINNDVRIRSP-IVETYRGHTQEVCGLK 273
Query: 226 WAHPKYGNLLASCSYDRKVIIWKES----GEWTK-LHEYTGHESSVNSIAWAPAEYGLTL 390
W+ G LAS D V IW S T+ LH H S+V ++AW P + L L
Sbjct: 274 WSGS--GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANL-L 330
Query: 391 ACSSSDGSISV 423
A G ++
Sbjct: 331 ATGGGGGDRTI 341
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 36.3 bits (80), Expect = 0.009
Identities = 22/90 (24%), Positives = 41/90 (45%)
Frame = +1
Query: 94 LDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 273
LD+ + + D++V ++D +G+ + + GPV + WA G +A +
Sbjct: 136 LDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNN 193
Query: 274 RKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
+V +W + GH+S V S+AW
Sbjct: 194 SEVQLWDSASNRQLRTLKGGHQSRVGSLAW 223
Score = 35.5 bits (78), Expect = 0.015
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
L T+ GH+ + L + L T D + D++ + + +GH V +
Sbjct: 207 LRTLKGGHQSRV--GSLAWNNHILTTGGMDGLIINNDVRIRSP-IVETYRGHTQEVCGLK 263
Query: 226 WAHPKYGNLLASCSYDRKVIIWKES----GEWTK-LHEYTGHESSVNSIAWAPAEYGLTL 390
W+ G LAS D V IW S T+ LH H S+V ++AW P + L L
Sbjct: 264 WSGS--GQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANL-L 320
Query: 391 ACSSSDGSISV 423
A G ++
Sbjct: 321 ATGGGGGDRTI 331
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 35.5 bits (78), Expect = 0.015
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GHE + A + G TC D ++++++ G L K H V V H
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRG--ILIKTYKSHGREVRDV---HVTS 70
Query: 244 GNL-LASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
N SC DR+V W S + ++ GH+ VN++
Sbjct: 71 DNAKFCSCGGDRQVYYWDVS-TGRVIRKFRGHDGEVNAV 108
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.5 bits (78), Expect = 0.015
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 6/119 (5%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
+ T+ GHE + L + L T D + D++ + + L GH V +
Sbjct: 169 VRTLRGGHESRV--GSLAWNNHILTTGGMDGKIVNNDVRIRSSIVETYL-GHTEEVCGLK 225
Query: 226 WAHPKYGNLLASCSYDRKVIIWKE----SGEWTK--LHEYTGHESSVNSIAWAPAEYGL 384
W+ G LAS D V IW S T+ LH + H ++V ++AW P + L
Sbjct: 226 WSES--GKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASL 282
Score = 30.3 bits (65), Expect = 0.58
Identities = 23/90 (25%), Positives = 37/90 (41%)
Frame = +1
Query: 94 LDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 273
LD+ + + ++V ++D SG+ + GPV + W G LA +
Sbjct: 98 LDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQD--GLDLAIGLDN 155
Query: 274 RKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
+V +W GHES V S+AW
Sbjct: 156 SEVQLWDCVSNRQVRTLRGGHESRVGSLAW 185
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 35.5 bits (78), Expect = 0.015
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L + SSD S+K++ K+ QTL+ GH V +A P G L S S+D + +W
Sbjct: 165 LVSGSSDASLKLWKGKTSLQTLS----GHTDTVRGLA-VMPDLGFL--SASHDGSIRLWA 217
Query: 295 ESGEWTKLHEYTGHESSVNSI 357
SGE L E GH S V S+
Sbjct: 218 LSGE--VLLEMVGHTSLVYSV 236
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +1
Query: 148 IYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK----ESGEWTK 315
+ DI L +L GH V + + + +A+ S DR + +W + ++T
Sbjct: 2 VMDIDFNEYKLRCELHGHDDDVRGICVCNDEN---IATSSRDRTIRVWSLDPSDKRKYTS 58
Query: 316 LHEYTGHESSVNSIAWAP 369
GH S V +AW P
Sbjct: 59 EKILLGHTSFVGPLAWIP 76
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 35.5 bits (78), Expect = 0.015
Identities = 31/81 (38%), Positives = 42/81 (51%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
L + SSD S+K++ K+ QTL+ GH V +A P G L S S+D + +W
Sbjct: 165 LVSGSSDASLKLWKGKTSLQTLS----GHTDTVRGLA-VMPDLGFL--SASHDGSIRLWA 217
Query: 295 ESGEWTKLHEYTGHESSVNSI 357
SGE L E GH S V S+
Sbjct: 218 LSGE--VLLEMVGHTSLVYSV 236
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Frame = +1
Query: 148 IYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK----ESGEWTK 315
+ DI L +L GH V + + + +A+ S DR + +W + ++T
Sbjct: 2 VMDIDFNEYKLRCELHGHDDDVRGICVCNDEN---IATSSRDRTIRVWSLDPSDKRKYTS 58
Query: 316 LHEYTGHESSVNSIAWAP 369
GH S V +AW P
Sbjct: 59 EKILLGHTSFVGPLAWIP 76
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 35.1 bits (77), Expect = 0.020
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
+A+ S D+ V I+++K+ T+ L L GH V V+W +PK +LAS S D+ + IW
Sbjct: 458 IASGSEDSQVYIWNLKN-TKPLEV-LSGHSMTVNCVSW-NPKNPRMLASASDDQTIRIW 513
Score = 32.3 bits (70), Expect = 0.14
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 247 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
+ +AS S D +V IW L +GH +VN ++W P + LA +S D +I +
Sbjct: 456 SFIASGSEDSQVYIWNLKNT-KPLEVLSGHSMTVNCVSWNPKNPRM-LASASDDQTIRI 512
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 35.1 bits (77), Expect = 0.020
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
GL L T +S + VKI+D+KS Q A GH G V ++++ + G LA+ + D V
Sbjct: 365 GLILGTGTSQSVVKIWDVKS--QANVAKFDGHTGEVTAISFS--ENGYFLATAAED-GVR 419
Query: 286 IWKESGEWTKLHEYTGHESS-VNSIAWAPAEYGLTLACS 399
+W + KL + S+ NS+ + P+ L +A S
Sbjct: 420 LW----DLRKLRNFKSFLSADANSVEFDPSGSYLGIAAS 454
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 35.1 bits (77), Expect = 0.020
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
GL L T +S + VKI+D+KS Q A GH G V ++++ + G LA+ + D V
Sbjct: 365 GLILGTGTSQSVVKIWDVKS--QANVAKFDGHTGEVTAISFS--ENGYFLATAAED-GVR 419
Query: 286 IWKESGEWTKLHEYTGHESS-VNSIAWAPAEYGLTLACS 399
+W + KL + S+ NS+ + P+ L +A S
Sbjct: 420 LW----DLRKLRNFKSFLSADANSVEFDPSGSYLGIAAS 454
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 34.7 bits (76), Expect = 0.027
Identities = 33/119 (27%), Positives = 52/119 (43%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
TGH + +G A+ S D ++KI+DI+ + KGH V V P
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NVLRFTPD 154
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G + S D V +W + L E+ HE + S+ + P E+ LA S+D ++
Sbjct: 155 -GRWVVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTV 209
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 34.7 bits (76), Expect = 0.027
Identities = 33/119 (27%), Positives = 52/119 (43%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
TGH + +G A+ S D ++KI+DI+ + KGH V V P
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NVLRFTPD 154
Query: 241 YGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G + S D V +W + L E+ HE + S+ + P E+ LA S+D ++
Sbjct: 155 -GRWVVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTV 209
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 34.7 bits (76), Expect = 0.027
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQ 219
T+L ++ +GH + + G +AT SSD +V+++D+K + + H VW
Sbjct: 234 TLLGSM-SGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK--MRAAIQTMSNHNDQVWS 290
Query: 220 VAWAHP----KYGNLLASCSYDRKVIIWKES 300
VA+ P LAS S D+ V ++ S
Sbjct: 291 VAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 211 VWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTL 390
V VAW+ P G LA S D + ++ + LH+ GH V S+ ++P + L
Sbjct: 161 VLSVAWS-PN-GKRLACGSMDGTICVF-DVDRSKLLHQLEGHNMPVRSLVFSPVD-PRVL 216
Query: 391 ACSSSDGSISV 423
S DG +++
Sbjct: 217 FSGSDDGHVNM 227
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S + V++Y G ++ H G V ++++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW-DAAT 495
Query: 307 WTKLHEYTGHESSVNSI 357
K H + GHE+ V S+
Sbjct: 496 GVKRHTFEGHEAPVYSV 512
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 109 LRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 288
L + TC D ++K++D +G + +GH PV+ V + + + S + D K+
Sbjct: 477 LCVITCGDDKTIKVWDAATGVKRHT--FEGHEAPVYSVCPHYKENIQFIFSTALDGKIKA 534
Query: 289 W 291
W
Sbjct: 535 W 535
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 34.7 bits (76), Expect = 0.027
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S + V++Y G ++ H G V ++++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW-DAAT 495
Query: 307 WTKLHEYTGHESSVNSI 357
K H + GHE+ V S+
Sbjct: 496 GVKRHTFEGHEAPVYSV 512
Score = 32.7 bits (71), Expect = 0.11
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 109 LRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 288
L + TC D ++K++D +G + +GH PV+ V + + + S + D K+
Sbjct: 477 LCVITCGDDKTIKVWDAATGVKRHT--FEGHEAPVYSVCPHYKENIQFIFSTALDGKIKA 534
Query: 289 W 291
W
Sbjct: 535 W 535
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 34.3 bits (75), Expect = 0.036
Identities = 27/102 (26%), Positives = 44/102 (43%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + D T S+D ++KI+D+ +G L L GH G V +A ++
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG--VLKLTLTGHIGQVRGLAVSNRH- 224
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
+ S D++V W + + + Y GH V +A P
Sbjct: 225 -TYMFSAGDDKQVKCW-DLEQNKVIRSYHGHLHGVYCLALHP 264
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S + V++Y G ++ H G V +A++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVW-DAAT 495
Query: 307 WTKLHEYTGHESSVNSI 357
K + + GHE+ V SI
Sbjct: 496 GVKRYTFEGHEAPVYSI 512
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 34.3 bits (75), Expect = 0.036
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 SDNSVKIYDIKSGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S + V++Y G ++ H G V +A++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVW-DAAT 495
Query: 307 WTKLHEYTGHESSVNSI 357
K + + GHE+ V SI
Sbjct: 496 GVKRYTFEGHEAPVYSI 512
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 33.9 bits (74), Expect = 0.047
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +1
Query: 187 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWA 366
+ +GH G V ++W+ Y L S S D+ V +WK G L + H S V S+ +
Sbjct: 323 EFRGHTGEVLDISWSKDNY---LLSASMDKTVRLWK-VGSNDCLGVF-AHNSYVTSVQFN 377
Query: 367 PAEYGLTLACSSSDGSISV 423
P ++ S DG + +
Sbjct: 378 PVNENYFMS-GSIDGKVRI 395
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 33.9 bits (74), Expect = 0.047
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 187 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
++ H G V +A+A+P + +C D+ + +W SG K + GH++ V SI
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGR--KHFTFEGHDAPVYSI 501
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 33.9 bits (74), Expect = 0.047
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDI-KSGTQTLAADLKGHFGPVWQV 222
LNT+D G E +A SD ++++D K GT H +
Sbjct: 315 LNTVDVGGES----------SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISAC 364
Query: 223 AWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAE 375
W + +LL S SYD K+++W W L H V S W E
Sbjct: 365 KWHKSSWFHLL-SASYDGKIMLWDLRTAW-PLSVIDTHNDKVLSADWWKGE 413
Score = 26.6 bits (56), Expect = 7.1
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Frame = +1
Query: 64 GHEDMIHDAEL----DYYGLRLATCSSDNSVKIY------DIKSGTQTLAAD-LKGHFGP 210
GH I L D + +AT S D +++++ + S T+ A L+GH
Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207
Query: 211 VWQVAWAHPKYGNLLASCSYDRKVIIW 291
V V+ K GN++ S S+D + +W
Sbjct: 208 VQSVS--AQKSGNMVCSSSWDCTINLW 232
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.9 bits (74), Expect = 0.047
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G++L S S DR+V++W KL ++GH ++V + P T+ ++DG +
Sbjct: 71 GDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMV 128
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.9 bits (74), Expect = 0.047
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 178 LAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSI 357
L L GH G V V + G++L S S DR++++W KL +GH +V
Sbjct: 47 LYGKLNGHEGCVNAVEFNST--GDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQT 104
Query: 358 AWAPAEYGLTLACSSSDGSI 417
+ P T+ S +DG +
Sbjct: 105 KFIPFTDDRTIITSGADGQV 124
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 33.5 bits (73), Expect = 0.062
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Frame = +1
Query: 61 TGHEDMIHDAE-LDYYGLRLATCSSDNSVKIYDIKSGTQT--LAADLK-GHFGPVWQVAW 228
TGH + + + L T S D + ++D+ +G +T + + GH V V+
Sbjct: 153 TGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSI 212
Query: 229 AHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ N S S D +W + + GHE VN++ + P G S D
Sbjct: 213 SGSN-PNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD--GYRFGTGSDD 269
Query: 409 GS 414
G+
Sbjct: 270 GT 271
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSG--TQTLAADLKGHFGPVWQVAWA 231
GHE ++ + G R T S D + ++YDI++G Q G GPV +A++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 33.5 bits (73), Expect = 0.062
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Frame = +1
Query: 61 TGHEDMIHDAE-LDYYGLRLATCSSDNSVKIYDIKSGTQT--LAADLK-GHFGPVWQVAW 228
TGH + + + L T S D + ++D+ +G +T + + GH V V+
Sbjct: 91 TGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSI 150
Query: 229 AHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ N S S D +W + + GHE VN++ + P G S D
Sbjct: 151 SGSN-PNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD--GYRFGTGSDD 207
Query: 409 GS 414
G+
Sbjct: 208 GT 209
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSG--TQTLAADLKGHFGPVWQVAWA 231
GHE ++ + G R T S D + ++YDI++G Q G GPV +A++
Sbjct: 184 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 241
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 33.5 bits (73), Expect = 0.062
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Frame = +1
Query: 61 TGHEDMIHDAE-LDYYGLRLATCSSDNSVKIYDIKSGTQT--LAADLK-GHFGPVWQVAW 228
TGH + + + L T S D + ++D+ +G +T + + GH V V+
Sbjct: 153 TGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSI 212
Query: 229 AHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
+ N S S D +W + + GHE VN++ + P G S D
Sbjct: 213 SGSN-PNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPD--GYRFGTGSDD 269
Query: 409 GS 414
G+
Sbjct: 270 GT 271
Score = 32.7 bits (71), Expect = 0.11
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSG--TQTLAADLKGHFGPVWQVAWA 231
GHE ++ + G R T S D + ++YDI++G Q G GPV +A++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 33.1 bits (72), Expect = 0.082
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 121 TCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY-GNLLASCSYDRKVIIWKE 297
T S D +++++D +S ++ L G VW++ HP G +LA+C ++ +
Sbjct: 228 TGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIK-HHPSLSGVVLAACMHNGFALAKVS 286
Query: 298 SGEWTKLHEYTGHESSVNSIAW 363
G+ L Y H S W
Sbjct: 287 DGKGEVLESYNKHHSLAYGADW 308
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 33.1 bits (72), Expect = 0.082
Identities = 27/102 (26%), Positives = 44/102 (43%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH + D T S+D ++KI+D+ +G L L GH V +A ++
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG--VLKLTLTGHIEQVRGLAVSNRH- 230
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP 369
+ S D++V W + + + Y GH S V +A P
Sbjct: 231 -TYMFSAGDDKQVKCW-DLEQNKVIRSYHGHLSGVYCLALHP 270
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 33.1 bits (72), Expect = 0.082
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S D +K++D ++G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 307 WTKLHEYTGHESSVNSI 357
H+ VN +
Sbjct: 175 PDPNFTLDAHQKGVNCV 191
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 232 HPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDG 411
HP +L+S S D + +W W + GH V + + P + T A +S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 412 SISV 423
+I +
Sbjct: 166 TIKI 169
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 33.1 bits (72), Expect = 0.082
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S D +K++D ++G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 307 WTKLHEYTGHESSVNSI 357
H+ VN +
Sbjct: 175 PDPNFTLDAHQKGVNCV 191
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 232 HPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDG 411
HP +L+S S D + +W W + GH V + + P + T A +S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 412 SISV 423
+I +
Sbjct: 166 TIKI 169
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 33.1 bits (72), Expect = 0.082
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S D +K++D ++G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 307 WTKLHEYTGHESSVNSI 357
H+ VN +
Sbjct: 175 PDPNFTLDAHQKGVNCV 191
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 232 HPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDG 411
HP +L+S S D + +W W + GH V + + P + T A +S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 412 SISV 423
+I +
Sbjct: 166 TIKI 169
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 33.1 bits (72), Expect = 0.082
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Frame = +1
Query: 79 IHDAELDYYGLRLATCSSDNSVKIYDIKSG--TQTLAADLKGHFGPVWQVAWAHPKYGNL 252
I+D +D + T D + I+DI+SG ++ D + H PV + P L
Sbjct: 529 IYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQD-RDHGDPVKVI--LDPSCNYL 585
Query: 253 LASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAP-AEYGLTLACSSSDGSISV 423
+ CSY + I + + + + TGH +V + + P ++ +++A SDG I V
Sbjct: 586 V--CSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVA---SDGCIFV 638
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.1 bits (72), Expect = 0.082
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +1
Query: 187 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWA 366
+ KGH G + ++W+ Y L S S D V +W+ + L +T H + V +A+
Sbjct: 317 EFKGHIGEILDLSWSEKGY---LLSSSVDETVRLWRVGCD-ECLRTFT-HNNFVTCVAFN 371
Query: 367 PAEYGLTLACSSSDGSISV 423
P + ++ S DG + +
Sbjct: 372 PVDDNYFIS-GSIDGKVRI 389
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.1 bits (72), Expect = 0.082
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +1
Query: 187 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWA 366
+ KGH G + ++W+ Y L S S D V +W+ + L +T H + V +A+
Sbjct: 317 EFKGHIGEILDLSWSEKGY---LLSSSVDETVRLWRVGCD-ECLRTFT-HNNFVTCVAFN 371
Query: 367 PAEYGLTLACSSSDGSISV 423
P + ++ S DG + +
Sbjct: 372 PVDDNYFIS-GSIDGKVRI 389
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 33.1 bits (72), Expect = 0.082
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 235 PKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWA 366
PK G+LL S D KV IW + Y GH +V I ++
Sbjct: 292 PKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFS 335
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 32.7 bits (71), Expect = 0.11
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 286 IWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
+W + + E+TGH+ V ++ W P++ L C+ + +I
Sbjct: 246 LWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTI 289
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 32.7 bits (71), Expect = 0.11
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 286 IWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
+W + + E+TGH+ V ++ W P++ L C+ + +I
Sbjct: 246 LWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTI 289
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTL 180
L + TGHE + D + G L T SSD + +++ +++G + +
Sbjct: 251 LEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEM 295
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
LAT SSD +VKI+++ G + L L GH VW ++ G L + S D +W
Sbjct: 232 LATASSDKTVKIWNL-DGFK-LEKVLTGHERWVWDCDFSMD--GEYLVTASSDTTARLW 286
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 32.7 bits (71), Expect = 0.11
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 306
S D +K++D + G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWEKGWACTQI-FEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 307 WTKLHEYTGHESSVNSI 357
H+ VN +
Sbjct: 175 PDPNFTLDAHQKGVNCV 191
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 232 HPKYGNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDG 411
HP +L+S S D + +W W + GH V + + P + T A +S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTN-TFASASLDR 165
Query: 412 SISV 423
+I +
Sbjct: 166 TIKI 169
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 32.3 bits (70), Expect = 0.14
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
GL +++ S+D + I+DI+ + + +K H V++ W H Y LL S S D +
Sbjct: 594 GLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEW-HSSY-PLLVSISSDLAIG 651
Query: 286 IWK 294
I K
Sbjct: 652 IHK 654
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 32.3 bits (70), Expect = 0.14
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LAT SSD +VKI+++ G + L L GH VW ++ G L + S D +W
Sbjct: 226 LATASSDKTVKIWNV-DGFK-LEKVLTGHQRWVWDCVFSVD--GEFLVTASSDMTARLWS 281
Query: 295 -ESGEWTKLHEYTGHESS 345
+G+ K+ Y GH +
Sbjct: 282 MPAGKEVKV--YQGHHKA 297
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ 174
L + TGH+ + D G L T SSD + +++ + +G +
Sbjct: 245 LEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKE 287
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 32.3 bits (70), Expect = 0.14
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 67 HEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYG 246
H+D + + LA+ S D +KI+ I++G D H V ++++ + G
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFD--AHSQGVTSLSFS--RDG 317
Query: 247 NLLASCSYDRKV-IIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
+ L S S+D+ I +SG+ K E+ GH S VN + G + +SSD ++ V
Sbjct: 318 SQLLSTSFDQTARIHGLKSGKLLK--EFRGHTSYVNHAIF--TSDGSRIITASSDCTVKV 373
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKS 165
GH ++ A G R+ T SSD +VK++D K+
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKT 378
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 31.9 bits (69), Expect = 0.19
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +1
Query: 94 LDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 273
LD+ + + ++V ++D SG+ + + GPV + W G LA +
Sbjct: 129 LDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQD--GLDLAVGLDN 186
Query: 274 RKVIIWKESGEWTKLHEYTGHESSVNSIAW 363
+V +W GHES V S+AW
Sbjct: 187 SEVQLWDFVSNRQVRTLIGGHESRVGSLAW 216
Score = 31.9 bits (69), Expect = 0.19
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVA 225
+ T+ GHE + L + L T D + D++ + + L GH V +
Sbjct: 200 VRTLIGGHESRV--GSLAWNNHILTTGGMDGKIVNNDVRIRSSIVGTYL-GHTEEVCGLK 256
Query: 226 WAHPKYGNLLASCSYDRKVIIW--------KESGEWTKLHEYTGHESSVNSIAWAP 369
W+ G LAS V IW K + +W LH + H ++V ++AW P
Sbjct: 257 WSES--GKKLASGGNYNVVHIWDHRSVASSKPTRQW--LHRFEEHTAAVRALAWCP 308
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 31.9 bits (69), Expect = 0.19
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIK--SGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
RL S ++VK++D+ SG + + V V W H ++AS D+K+
Sbjct: 11 RLLAASGGDTVKLFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTNL--VVASTGEDKKIS 68
Query: 286 IWKESGEWTKLHEYTGHESSVNS----IAWAPAEYGLTLACSSSDGSI 417
+W+++G+ TG + ++ A + ++ G CS G I
Sbjct: 69 LWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQI 116
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 31.9 bits (69), Expect = 0.19
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G++L S S DR+VI+W KL +GH +++ + P T+ S++D +
Sbjct: 67 GDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQV 124
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV 213
GH+D + GL LAT + D + +++DI++ +++ A LKG+ G +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAV-LKGNMGAI 336
Score = 27.1 bits (57), Expect = 5.4
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 109 LRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQV-AWAHPKYGNLLASCSYDRKVI 285
LRL T ++D ++++D +S T+ F W V + G LLA + +
Sbjct: 220 LRLITANNDCKIRVFDAQSFTRV------SEFALDWSVNNTSVSPDGKLLAVVGDSTECL 273
Query: 286 IWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSD 408
I +S + GH+ + AW P GL LA + D
Sbjct: 274 I-SDSHSGKVISSLRGHKDYSFASAWHP--NGLILATGNQD 311
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 31.5 bits (68), Expect = 0.25
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
S D +K++D + G +GH V QV + +PK N AS S DR + IW
Sbjct: 118 SDDMLIKLWDWEKGWLCTQI-FEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIW 170
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 292 KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISVLA 429
+E+ W HESSV S+AW P + LA +S+DG V +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRVFS 173
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 247 NLLASCSYDRKVIIWKESGE--WTKLHEYTGHESSVNSIAWA 366
+++A C + +V I+K + W +LH H+ V+ I W+
Sbjct: 23 SMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWS 64
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 292 KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISVLA 429
+E+ W HESSV S+AW P + LA +S+DG V +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRVFS 173
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 247 NLLASCSYDRKVIIWKESGE--WTKLHEYTGHESSVNSIAWA 366
+++A C + +V I+K + W +LH H+ V+ I W+
Sbjct: 23 SMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWS 64
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 31.1 bits (67), Expect = 0.33
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 292 KESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISVLA 429
+E+ W HESSV S+AW P + LA +S+DG V +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRVFS 173
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 247 NLLASCSYDRKVIIWKESGE--WTKLHEYTGHESSVNSIAWA 366
+++A C + +V I+K + W +LH H+ V+ I W+
Sbjct: 23 SMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWS 64
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 40 TVLNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFG 207
++L +D GH+ ++ L +L T S D +V+I+D SG T +L G G
Sbjct: 135 SLLTQLD-GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVG 189
Score = 27.5 bits (58), Expect = 4.1
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +1
Query: 112 RLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQ-VAWAHPKYGNLLASCSYDRKVII 288
RL + + DNS+K++ + + Q + L H V + W L SCS D V I
Sbjct: 279 RLYSGAMDNSIKVWSLDN-LQCIQT-LTEHTSVVMSLICW-----DQFLLSCSLDNTVKI 331
Query: 289 WKESGEWTKLHEYTGHESSVNSIAWA---PAEYGLTLACSSSDGSI 417
W + E L H+ +A AE L CS +D S+
Sbjct: 332 WAAT-EGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSL 376
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 30.7 bits (66), Expect = 0.44
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 58 DTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHP 237
D G+ I + G + SSD+S+ +YD+++ +L H V V +A
Sbjct: 225 DGGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRT--VAHTSDVNTVCFA-D 281
Query: 238 KYGNLLASCSYDRKVIIW 291
+ GNL+ S S D +W
Sbjct: 282 ESGNLILSGSDDNLCKVW 299
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 160 KSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
K +Q ++ H GPV VA+ HP G+L+A+ +RK+ IW
Sbjct: 267 KPTSQAPLVQMQCHPGPVSSVAF-HPN-GHLMATSGKERKIKIW 308
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 247 NLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAE 375
N LAS YD V IW ++G +YT H+ S+ ++P++
Sbjct: 779 NYLASTDYDGVVQIW-DAGTGQGFSQYTEHQKRAWSVDFSPSD 820
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 43 VLNTID--TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTL 180
+L+T+D T H + + G+ L + SD+ ++++DI+SG TL
Sbjct: 301 MLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTL 348
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 30.7 bits (66), Expect = 0.44
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
GL L T ++ + VKI+D+KS Q A GH G + ++++ + G LA+ + D V
Sbjct: 366 GLILGTGTAQSIVKIWDVKS--QANVAKFGGHNGEITSISFS--ENGYFLATAALD-GVR 420
Query: 286 IW 291
+W
Sbjct: 421 LW 422
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.9 bits (64), Expect = 0.77
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYT-GHESSVNSIAWAPAEYGLTLACSSSDGSIS 420
G LL S S+DR + IW+ + ++ L +T H+ ++N++A +E G + SSD I
Sbjct: 177 GTLLYSVSWDRTLKIWRTT-DFKCLESFTNAHDDAINAVAL--SENG-DIYTGSSDQRIK 232
Query: 421 V 423
V
Sbjct: 233 V 233
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV 213
L + S+D +V+++ + + A L+GH GPV
Sbjct: 318 LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPV 350
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.9 bits (64), Expect = 0.77
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 46 LNTIDTGHEDMIHDAELDYYGLRLATCSSDNSVKIYDI-KSGTQTLAADLKGHFGPVWQV 222
LNT+D G E +A SD ++++D K GT H +
Sbjct: 315 LNTVDVGGES----------SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISAC 364
Query: 223 AWAHPKYGNLLASCSYDRKVIIW 291
W + +LL S SYD K+++W
Sbjct: 365 KWHKSSWFHLL-SASYDGKIMLW 386
Score = 26.6 bits (56), Expect = 7.1
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Frame = +1
Query: 64 GHEDMIHDAEL----DYYGLRLATCSSDNSVKIY------DIKSGTQTLAAD-LKGHFGP 210
GH I L D + +AT S D +++++ + S T+ A L+GH
Sbjct: 148 GHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKAS 207
Query: 211 VWQVAWAHPKYGNLLASCSYDRKVIIW 291
V V+ K GN++ S S+D + +W
Sbjct: 208 VQSVS--AQKSGNMVCSSSWDCTINLW 232
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.9 bits (64), Expect = 0.77
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +1
Query: 124 CSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESG 303
C S + + Y +S LKGH V + A GNLL S S D+ + +W+
Sbjct: 341 CGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGIA----GNLLLSGSADKNICVWRRDP 396
Query: 304 EWTKLHE----YTGHESSVNSIA 360
K H+ TGH V +A
Sbjct: 397 S-DKSHQCLSVLTGHMGPVKCLA 418
>At3g01100.1 68416.m00015 early-responsive to dehydration
protein-related / ERD protein-related low similarity to
ERD4 protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 703
Score = 29.9 bits (64), Expect = 0.77
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = -3
Query: 241 TWDVPKLLAILDQNDLSDLLLGFAYHSLYRIFLPNYPKNMLLISNHNSPVQH 86
TW P L IL+ +S ++ G+ ++++FL P MLL+S+ + H
Sbjct: 388 TW-FPFLKGILNMKIVSQVITGYLPSLIFQLFLLIVPPIMLLLSSMQGFISH 438
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 29.9 bits (64), Expect = 0.77
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 190 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-KESGEWTKLHEYTGHESSV 348
+KGH P+ + + + G+LL SC+ D +W ++GE +L Y GH +V
Sbjct: 33 MKGHERPLTFLRYN--RNGDLLFSCAKDHTPTVWFADNGE--RLGTYRGHSGAV 82
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ 174
GH + ++ RL T S+D + K++D+KSG +
Sbjct: 77 GHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKE 113
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 29.5 bits (63), Expect = 1.0
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHF-GPVWQVAWAHPKYGNLLASCSYDRKVIIW 291
+A + ++S++I+D+ + L G G + + N++AS S D+KV +W
Sbjct: 183 VAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVW 242
Query: 292 K-ESGEWTKLHEYTGHESSVNSIAW 363
+G+ E+ HE V+++AW
Sbjct: 243 DVATGKCKVTMEH--HEKKVHAVAW 265
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 29.5 bits (63), Expect = 1.0
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 64 GHEDMIHD-AELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPK 240
GH D + A+ Y + + S D ++++DI S + GH G V + +
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISS--RRTVCQFPGHQGAVRGLTASTD- 110
Query: 241 YGNLLASCSYDRKVIIW 291
GN+L SC D V +W
Sbjct: 111 -GNVLVSCGTDCTVRLW 126
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 29.5 bits (63), Expect = 1.0
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
G + S S D IW+ + GH+ V ++ W+P+E G +A +S D ++
Sbjct: 350 GEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIG-KVATASDDFTV 406
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LA SDNS+ I+D+K W +AS + ++I+W+
Sbjct: 150 LAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWR 209
Query: 295 ---------ESGEWTKLH--EYTGHESSVNSIAWA 366
+ G ++ H TGHE S+ I W+
Sbjct: 210 AVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWS 244
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.1 bits (62), Expect = 1.3
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
LA SDNS+ I+D+K W +AS + ++I+W+
Sbjct: 150 LAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWR 209
Query: 295 ---------ESGEWTKLH--EYTGHESSVNSIAWA 366
+ G ++ H TGHE S+ I W+
Sbjct: 210 AVGLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWS 244
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 29.1 bits (62), Expect = 1.3
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 139 SVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK--ESGEWT 312
S+++ +I + ++L +GH V +A+ +LLAS S D KV +WK E E
Sbjct: 203 SIRVLNINTALRSL---FRGHSQRVTDMAFFAEDV-HLLASVSLDGKVFVWKISEGSEGD 258
Query: 313 KLHEYTG 333
+ + TG
Sbjct: 259 EQSQITG 265
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ 174
GH + ++ RL T S+D + K++D+KSG +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKE 86
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ 174
GH + ++ RL T S+D + K++D+KSG +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKE 86
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 1.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQ 174
GH + ++ RL T S+D + K++D+KSG +
Sbjct: 50 GHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKE 86
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 29.1 bits (62), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 244 GNLLASCSYDRKVIIWKESGE-WTKLHEYTGHESSVNSIA 360
G LL S + D+K+ +W+ G+ T + TGH V +A
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLA 315
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 250 LLASCSYDRKVIIWKESGEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSISV 423
LL S S+DR V +W+ + + H+ +VNS+ A + + S+DG++ V
Sbjct: 149 LLYSASWDRTVKVWR-IHDLKCIESIKAHDDAVNSVTTAES----LVFTGSADGTVKV 201
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.1 bits (62), Expect = 1.3
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = +1
Query: 121 TCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES 300
T S D+ VK++D + T + D K G V++ A + + L + D + +
Sbjct: 121 TGSFDHYVKVWD--TNTSQVVVDFKMP-GKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDI 177
Query: 301 GEWTKLHEYTGHESSVNSIAWAPAEYGLTLACSSSDGSI 417
H +GH V S+ W+ + + L DG+I
Sbjct: 178 ASGAFSHTLSGHRDGVMSVEWSTSSEWV-LYTGGCDGAI 215
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 43 VLNTID--TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTL 180
+L+T+D T H ++ + G+ L + S + ++++DI+SG TL
Sbjct: 301 MLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTL 348
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 28.7 bits (61), Expect = 1.8
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAA-----DLKGHFGPVWQVAW 228
GH ++ +D G R+ + S D +V++YD + L + +GH V V+W
Sbjct: 175 GHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGH--QVRSVSW 232
Query: 229 AHPKYGNLLASCSYDRKVIIWKES---GEWTK-------LHEYTGHESSVNSIAWAPAEY 378
+ P G L + I ++ GE+ K L GH + W P
Sbjct: 233 S-PTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTK 291
Query: 379 GLTLACSSSDGSISV 423
T+ SS DGS+ +
Sbjct: 292 E-TVLTSSEDGSLRI 305
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Frame = +1
Query: 58 DTGHEDMIHDAE--LDYY--------GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFG 207
DTG +IH E LDY G LAT + D + +++D+++ +Q+L LKG+ G
Sbjct: 305 DTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKV-LKGNMG 363
Query: 208 PV 213
+
Sbjct: 364 AI 365
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGTQTLAADLKGHF-GPVWQVAWA--HPKYGNLLASCSYDRKVI 285
+A+C D +++YD+K+ A LK H G V+ ++ N +A + + K+
Sbjct: 317 IASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGFSGEETAVANTVAEAATEEKMT 376
Query: 286 IWKESGEWTK 315
I + + T+
Sbjct: 377 IMDQEDDETE 386
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +1
Query: 250 LLASCSYDRKVIIWK----ESGEWTK-LHEYTGHESSVNSIAWAPAE 375
LLA C +D V +WK +S E T+ L ++ + + ++AWAP E
Sbjct: 452 LLAGC-HDGTVALWKFSTTKSSEDTRPLLFFSADTAPIRAVAWAPGE 497
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 61 TGHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAW 228
+GH D + G+ +T + D + +++DI++ +Q++ LKG+ G + + +
Sbjct: 316 SGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTV-LKGNLGAIRSIRY 370
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH D + LD G + SSD+ ++++D+ G Q H VW +A +P +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQRCLHTYAVHTDSVWALA-CNPSF 309
Query: 244 GNL 252
++
Sbjct: 310 SHV 312
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKY 243
GH D + LD G + SSD+ ++++D+ G Q H VW +A +P +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQRCLHTYAVHTDSVWALA-CNPSF 309
Query: 244 GNL 252
++
Sbjct: 310 SHV 312
>At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related
similar to Chain A, Crystal Structure Of Human
Tyrosyl-Dna Phosphodiesterase (Tdp1) [Homo sapiens]
GI:20150581
Length = 605
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 145 KIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 279
K +D T L A + G+ W H K +L C +DR+
Sbjct: 323 KKFDYSDATVRLIASVPGYHTGFNLNKWGHMKLRTILQECIFDRE 367
>At2g19650.1 68415.m02296 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 27.1 bits (57), Expect = 5.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 109 NHNSPVQHHVSYPHDPCRS 53
+HNSP +H S+P P +S
Sbjct: 198 DHNSPEAYHTSHPQHPLKS 216
>At2g04680.1 68415.m00478 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 395 HAKVKPYSAGAQAIEFTELS*PVYSCN 315
H +++P + +A F LS P YSCN
Sbjct: 390 HGRIQPENIVCEACVFQILSEPFYSCN 416
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV 213
GH D + G+ AT + D + +I+D + ++++A LKG+ G V
Sbjct: 317 GHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAV-LKGNLGAV 365
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPV 213
GH D + G+ AT + D + +I+D + ++++A LKG+ G V
Sbjct: 311 GHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAV-LKGNLGAV 359
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 26.6 bits (56), Expect = 7.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 106 GLRLATCSSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
GL + + S D + ++DI+ + +K H V++ W + + LL S S D +
Sbjct: 450 GLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQ--PLLISISSDLNIG 507
Query: 286 IWKES 300
+ K S
Sbjct: 508 LHKIS 512
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 26.6 bits (56), Expect = 7.1
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 127 SSDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 294
SSD+ +++ D GT L LKG Q++ + G + S S D V IWK
Sbjct: 666 SSDSRIRVVD---GTD-LVNKLKGFRNTSSQISASITADGKYVVSASEDSHVYIWK 717
>At2g41870.1 68415.m05177 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 274
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 304 EWTKLHEYTGHESSVNSIAWAPAEY-GLTLACSSSDG 411
E ++HE T HE N +A P +Y G L S +G
Sbjct: 109 ELMRIHEDTDHEEETNPLAIVPDQYPGSGLDPGSDNG 145
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 64 GHEDMIHDAELDYYGLRLATCSSDNSVKIYDIKSG 168
GH D +H ++ T S D + +I+D K+G
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
>At3g17500.1 68416.m02235 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 438
Score = 26.2 bits (55), Expect = 9.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 109 LRLATCS-SDNSVKIYDIKSGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 285
L L C S SV + +I + + +LKG GP Q++ G LL + DR +
Sbjct: 55 LMLKDCRVSSVSVNLNEIHNNIAAPSIELKGVVGPQMQISGIFHCDGLLLCTTKDDR-LE 113
Query: 286 IWKESGEWTKLHEYTGH 336
+W T+ +++ H
Sbjct: 114 VWNPCTGQTRRVQHSIH 130
>At1g78110.1 68414.m09103 expressed protein
Length = 342
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 306 MDEIARIHRSREFSKFYSL 362
M+EI RIH +R SKF+ L
Sbjct: 121 MEEIERIHDNRSQSKFFGL 139
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGT 171
LAT + DN VK++++ SGT
Sbjct: 364 LATGADDNKVKVWNVMSGT 382
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 115 LATCSSDNSVKIYDIKSGT 171
LAT + DN VK++++ SGT
Sbjct: 404 LATGADDNKVKVWNVMSGT 422
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,512,156
Number of Sequences: 28952
Number of extensions: 192525
Number of successful extensions: 934
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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