Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D09
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   4.7  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   6.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.2  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   8.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.2  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 106 RMYGHVHINLY*TCHANKSKISSTDTIIGDHY 201
           +MY  +H   Y T     S + S  TI  D+Y
Sbjct: 386 KMYADMHQYGYNTLSPLPSSVHSHSTIGNDYY 417


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 151 HDKFSRDLYGRVHTYDHCQNKKRAYGHC 68
           H +F+RD + + H   H   +     HC
Sbjct: 16  HKRFTRDHHLKTHMRLHTGERPYRCEHC 43


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 151 HDKFSRDLYGRVHTYDHCQNKKRAYGHC 68
           H +F+RD + + H   H   +     HC
Sbjct: 169 HKRFTRDHHLKTHMRLHTGERPYRCEHC 196


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 108 TTIAKIRSARTAIVQLYVTTTIINMK 31
           T I  IR  R  +   YVT T  N+K
Sbjct: 278 TQIRNIRGPRKRLRFAYVTRTGANIK 303


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 376 YQYKVSPVWNLPDPKVL 326
           Y Y+VSPV+ L +  VL
Sbjct: 161 YTYEVSPVFVLMEEVVL 177


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 351 GIFPIPKSCPGY 316
           GIF  PK+C  Y
Sbjct: 564 GIFSDPKNCAAY 575


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,079
Number of Sequences: 336
Number of extensions: 2094
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)