Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D06
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   2.7  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   4.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   4.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    20   8.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    20   8.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   8.2  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 223 HLQRQASTQQRCFPGRHPY 167
           HLQ+Q   +QR   G +PY
Sbjct: 55  HLQQQQLKKQRLDNGDYPY 73



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 254 ISSAVTFLSGPSSATGVDAAEVL 186
           ++SAV   +GPS    + + E L
Sbjct: 271 LASAVASANGPSQDPSISSTETL 293


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -3

Query: 329 LTSSFNISSWMPKCA*ES 276
           L SSF+ISS +P+ A E+
Sbjct: 19  LKSSFSISSILPETALEA 36


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 138 EKSYLVLLFIT*KAIYEIKE*LSQVKTIPFPVKCSKSFC 22
           E SYL  +    K+  E K     +     PVKC   FC
Sbjct: 31  ETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 69


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 138 EKSYLVLLFIT*KAIYEIKE*LSQVKTIPFPVKCSKSFC 22
           E SYL  +    K+  E K     +     PVKC   FC
Sbjct: 264 ETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 302


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = -2

Query: 138 EKSYLVLLFIT*KAIYEIKE*LSQVKTIPFPVKCSKSFC 22
           E SYL  +    K+  E K     +     PVKC   FC
Sbjct: 264 ETSYLPFIRALGKSKKEFKTRTYFIYAFVAPVKCLAFFC 302


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 294 EMCIGIEIVISRSHLLSSN 238
           E+C+G E++I   + LSS+
Sbjct: 111 EVCLGDEVIIDVVNHLSSD 129


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 259 SRDYYFDSYAHFGIHEEMLKDEVRTL 336
           S+   F+S  +  +HEE L+  V  L
Sbjct: 48  SKPVSFESLPNRRLHEEFLRSSVDVL 73


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 247 QQ*RSCRDHLQRQASTQQRCFPG 179
           Q+ R+ R H Q+     Q  +PG
Sbjct: 292 QEYRTDRKHTQQHYQMNQNMYPG 314


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 247 QQ*RSCRDHLQRQASTQQRCFPG 179
           Q+ R+ R H Q+     Q  +PG
Sbjct: 240 QEYRTDRKHTQQHYQMNQNMYPG 262


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 247 QQ*RSCRDHLQRQASTQQRCFPG 179
           Q+ R+ R H Q+     Q  +PG
Sbjct: 423 QEYRTDRKHTQQHYQMNQNMYPG 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,616
Number of Sequences: 336
Number of extensions: 2155
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)