Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D06
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19670.1 68415.m02299 protein arginine N-methyltransferase, p... 89 8e-19
At4g29510.1 68417.m04210 protein arginine N-methyltransferase, p... 89 1e-18
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa... 70 7e-13
At3g12270.1 68416.m01532 protein arginine N-methyltransferase fa... 64 3e-11
At1g04870.2 68414.m00484 protein arginine N-methyltransferase fa... 52 2e-07
At5g49020.1 68418.m06065 protein arginine N-methyltransferase fa... 46 1e-05
At5g49020.2 68418.m06066 protein arginine N-methyltransferase fa... 44 3e-05
At3g06930.2 68416.m00823 protein arginine N-methyltransferase fa... 42 1e-04
At3g06930.1 68416.m00822 protein arginine N-methyltransferase fa... 42 1e-04
At4g30560.1 68417.m04337 cyclic nucleotide-regulated ion channel... 27 6.5
At1g52490.1 68414.m05925 F-box family protein contains F-box dom... 27 6.5
At1g23400.1 68414.m02930 expressed protein 27 6.5
At5g62470.2 68418.m07840 myb family transcription factor (MYB96)... 26 8.6
At5g62470.1 68418.m07839 myb family transcription factor (MYB96)... 26 8.6
At4g10925.2 68417.m01777 F-box family protein contains Pfam PF00... 26 8.6
At4g10925.1 68417.m01776 F-box family protein contains Pfam PF00... 26 8.6
At4g02850.1 68417.m00385 phenazine biosynthesis PhzC/PhzF family... 26 8.6
At3g42910.1 68416.m04500 expressed protein ; expression supporte... 26 8.6
At2g24640.1 68415.m02943 ubiquitin carboxyl-terminal hydrolase f... 26 8.6
>At2g19670.1 68415.m02299 protein arginine N-methyltransferase,
putative similar to protein arginine N-methyltransferase
1-variant 1 [Homo sapiens] GI:7453577
Length = 366
Score = 89.4 bits (212), Expect = 8e-19
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +1
Query: 220 DGPDKNV-TAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLD 396
DG D N A+++TS DYYFDSY+HFGIHEEMLKD VRT +Y++ +Y NK L K VLD
Sbjct: 30 DGDDNNADVADDITSADYYFDSYSHFGIHEEMLKDVVRTKSYQDVIYKNKFLIKDKIVLD 89
Query: 397 IGCGT 411
+G GT
Sbjct: 90 VGAGT 94
>At4g29510.1 68417.m04210 protein arginine N-methyltransferase,
putative similar to protein arginine N-methyltransferase
1-variant 2 [Homo sapiens] GI:7453575
Length = 390
Score = 88.6 bits (210), Expect = 1e-18
Identities = 44/84 (52%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +1
Query: 163 ESMDVAQESTSAASTPV-AEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLT 339
E VA E T + A + D ++ TS DYYFDSY+HFGIHEEMLKD VRT T
Sbjct: 35 EGSGVAGEETPQDESMFDAGESADTAEVTDDTTSADYYFDSYSHFGIHEEMLKDVVRTKT 94
Query: 340 YRNAMYHNKHLFTGKTVLDIGCGT 411
Y+N +Y NK L K VLD+G GT
Sbjct: 95 YQNVIYQNKFLIKDKIVLDVGAGT 118
>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 435
Score = 69.7 bits (163), Expect = 7e-13
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 271 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
YF SYAH GIHEEM+KD RT TYR A+ ++ L GK V+D+GCGT
Sbjct: 83 YFHSYAHVGIHEEMIKDRARTETYREAIMQHQSLIEGKVVVDVGCGT 129
>At3g12270.1 68416.m01532 protein arginine N-methyltransferase
family protein similar to protein arginine
N-methyltransferase 3 from {Rattus norvegicus}
SP|O70467, {Homo sapiens} SP|O60678
Length = 590
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +1
Query: 271 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
YF SY+ FGIH EML D+VRT YR+A+ N L G V+D+GCGT
Sbjct: 241 YFGSYSSFGIHREMLSDKVRTEAYRDALLKNPTLLNGSVVMDVGCGT 287
>At1g04870.2 68414.m00484 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 383
Score = 51.6 bits (118), Expect = 2e-07
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1
Query: 271 YFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
YF +Y+ ++ML D VR Y NA++ NKH F GKTVLD+G G+
Sbjct: 35 YFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGS 81
>At5g49020.1 68418.m06065 protein arginine N-methyltransferase
family protein similar to protein arginine
methyltransferase [Mus musculus] GI:5257221
Length = 528
Score = 46.0 bits (104), Expect = 1e-05
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +1
Query: 157 EMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKDEVRTL 336
E + D ++ ++ + V K E S YF Y + ML+D VRT
Sbjct: 113 ECKKDDAVKQGSALPNGTVVSANKSKFDDKIEAASAKMYFHYYGQLLHQQNMLQDYVRTG 172
Query: 337 TYRNAMYHNKHLFTGKTVLDIGCGT 411
TY A+ N+ F+G+ V+D+G G+
Sbjct: 173 TYHAAVMENRSDFSGRVVVDVGAGS 197
>At5g49020.2 68418.m06066 protein arginine N-methyltransferase
family protein similar to protein arginine
methyltransferase [Mus musculus] GI:5257221
Length = 526
Score = 44.4 bits (100), Expect = 3e-05
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 250 EMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
E S YF Y + ML+D VRT TY A+ N+ F+G+ V+D+G G+
Sbjct: 142 EAASAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVMENRSDFSGRVVVDVGAGS 195
>At3g06930.2 68416.m00823 protein arginine N-methyltransferase
family protein similar to protein arginine
methyltransferase [Mus musculus] GI:5257221
Length = 535
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 250 EMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
E +S YF Y + ML+D VRT TY A+ N F G+ V+D+G G+
Sbjct: 141 EASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENHSDFAGRVVVDVGAGS 194
>At3g06930.1 68416.m00822 protein arginine N-methyltransferase
family protein similar to protein arginine
methyltransferase [Mus musculus] GI:5257221
Length = 534
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 250 EMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNAMYHNKHLFTGKTVLDIGCGT 411
E +S YF Y + ML+D VRT TY A+ N F G+ V+D+G G+
Sbjct: 141 EASSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENHSDFAGRVVVDVGAGS 194
>At4g30560.1 68417.m04337 cyclic nucleotide-regulated ion channel,
putative similar to cyclic nucleotide and
calmodulin-regulated ion channel cngc6 GI:4581207 from
[Arabidopsis thaliana]
Length = 733
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 378 CEQMFIVVHSIPVSECSNFVF*HFLVDAEMCIGIE 274
C ++F+ + VS F++ F+ D E CIGI+
Sbjct: 114 CNKLFVTSCILAVSVDPLFLYLPFVKDNEKCIGID 148
>At1g52490.1 68414.m05925 F-box family protein contains F-box domain
Pfam:PF00646
Length = 423
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 184 PGRHPYFPFQVFYVRGKVLFSFAFYNL 104
PGR+ Y F+ YVRG + S + Y+L
Sbjct: 140 PGRNHYNAFRYQYVRGFICCSSSVYDL 166
>At1g23400.1 68414.m02930 expressed protein
Length = 564
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 148 KILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFD 279
K+ E+E +A E T A DG ++ E+ S +YY D
Sbjct: 483 KVEELEGTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSD 526
>At5g62470.2 68418.m07840 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 352
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 142 VHKILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKD 321
+ ++L+ D + T ++S+PV+E GP +EE + + S+ F D
Sbjct: 238 IARLLQDFMKDTPKALTLSSSSPVSETGPLTAAVSEE--GGEGFEQSFFSFN-----SMD 290
Query: 322 EVRTLTYRNAMYHNK 366
E + LT + +H++
Sbjct: 291 ETQNLTQETSFFHDQ 305
>At5g62470.1 68418.m07839 myb family transcription factor (MYB96)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 351
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 142 VHKILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTSRDYYFDSYAHFGIHEEMLKD 321
+ ++L+ D + T ++S+PV+E GP +EE + + S+ F D
Sbjct: 237 IARLLQDFMKDTPKALTLSSSSPVSETGPLTAAVSEE--GGEGFEQSFFSFN-----SMD 289
Query: 322 EVRTLTYRNAMYHNK 366
E + LT + +H++
Sbjct: 290 ETQNLTQETSFFHDQ 304
>At4g10925.2 68417.m01777 F-box family protein contains Pfam
PF00646: F-box domain
Length = 231
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 196 QRCFPGRHPYFPFQVFYVRGKVLFSFAFYNLKSYL 92
Q CF F FQV VR ++L A+ +K+YL
Sbjct: 158 QLCFNWEQG-FDFQVHTVRTRILTDMAWVTMKAYL 191
>At4g10925.1 68417.m01776 F-box family protein contains Pfam
PF00646: F-box domain
Length = 231
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 196 QRCFPGRHPYFPFQVFYVRGKVLFSFAFYNLKSYL 92
Q CF F FQV VR ++L A+ +K+YL
Sbjct: 158 QLCFNWEQG-FDFQVHTVRTRILTDMAWVTMKAYL 191
>At4g02850.1 68417.m00385 phenazine biosynthesis PhzC/PhzF family
protein contains Pfam profile: PF02567 phenazine
biosynthesis-like protein
Length = 306
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 348 IPVSECSNFVF*HFLVDAEMCIGIEIVISRSHLLSSNVLVGT 223
IP SE F+ F AEM I ++ +H + SN LVG+
Sbjct: 61 IPGSEPPRFLLRWFTAVAEMDICGHATLASAHSIFSNSLVGS 102
>At3g42910.1 68416.m04500 expressed protein ; expression supported
by MPSS
Length = 649
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -1
Query: 307 PRGCRNVHRNRNSNLSKSSPQQ*RSCRDHLQRQASTQQRCFPG 179
P CR+ +++SN +P + +++ AS + CFPG
Sbjct: 211 PLVCRSSRLDKDSNRDTQAPDKGFGLENYVDVIASYYKGCFPG 253
>At2g24640.1 68415.m02943 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 672
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 151 ILEMESMDVAQESTSAASTPVAEDGPDKNVTAEEMTS 261
I E + +ES+ +AS PV+E+G + +V + + S
Sbjct: 531 ISHSEDPEYEKESSLSASVPVSEEGKEVDVKVDTVDS 567
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,065,548
Number of Sequences: 28952
Number of extensions: 174990
Number of successful extensions: 483
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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