Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D05
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.30 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   2.1  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   2.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   3.7  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 180 DIRSMGTVAGFLTPVATEVIKPASNV--AAHPNPEYQRYDIRNNQN 49
           D R++     F+   A +   PA N   A +P+P Y+  D RN++N
Sbjct: 230 DPRALSPNLEFVVLEAFDFYTPARNPKEADYPSPLYELVDRRNDEN 275


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 329 CVAGACPCRR 300
           C+AG+ PCR+
Sbjct: 90  CIAGSAPCRK 99


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 192 ITGGDIRSMGTVAGFLTPVATEVIKPASNVAAHP 91
           + GG +RS+GT+   +    T++     + A  P
Sbjct: 218 LVGGIVRSLGTLGSRVVESGTKLANMVISAAIRP 251


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 308 KDTRRRRRLSEMAGGVFYSDILSLNIGHDNFALDSE 415
           KD  RRR++    G V ++D +   +G+D +    E
Sbjct: 268 KDPCRRRQMYVDFGSVGWNDWIVAPLGYDAYYCGGE 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,707
Number of Sequences: 336
Number of extensions: 2473
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)