Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D03
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 218 2e-57
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 218 2e-57
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 217 2e-57
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 204 2e-53
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 204 2e-53
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 83 7e-17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 73 1e-13
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 70 9e-13
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 65 3e-11
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 62 2e-10
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 62 2e-10
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 62 2e-10
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 59 1e-09
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 57 5e-09
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 56 9e-09
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 56 9e-09
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 54 6e-08
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 54 6e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 54 6e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 54 6e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 54 6e-08
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 54 6e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 54 6e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 53 1e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 53 1e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 53 1e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 51 4e-07
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 50 8e-07
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 50 8e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 48 2e-06
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 48 3e-06
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 48 4e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 47 6e-06
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 47 6e-06
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 47 7e-06
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 47 7e-06
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 46 2e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 4e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 4e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 9e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 2e-04
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 42 2e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 2e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 3e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 3e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 5e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 5e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 40 8e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.001
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 39 0.001
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.003
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 38 0.003
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.004
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.004
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.004
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.004
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.006
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 37 0.008
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 37 0.008
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.008
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 37 0.008
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 36 0.014
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 36 0.014
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 35 0.031
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 34 0.042
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 33 0.073
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 33 0.073
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 33 0.096
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.29
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 30 0.68
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 30 0.68
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 30 0.68
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 30 0.68
Z35595-10|CAA84634.2| 387|Caenorhabditis elegans Hypothetical p... 29 1.2
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 1.6
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 1.6
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 28 2.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 28 3.6
U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain p... 28 3.6
AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein. 28 3.6
AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical ... 28 3.6
U64604-1|AAF98623.1| 243|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 27 4.8
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 6.3
U42838-1|AAB52492.2| 398|Caenorhabditis elegans Hypothetical pr... 27 6.3
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 27 8.3
AF100305-1|AAC68918.1| 197|Caenorhabditis elegans Hypothetical ... 27 8.3
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 218 bits (532), Expect = 2e-57
Identities = 99/138 (71%), Positives = 117/138 (84%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYG 209
R MWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FGNILSCKVA DE G SKGYG
Sbjct: 41 RIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYG 100
Query: 210 FVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGED 389
FVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKNFG+
Sbjct: 101 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 160
Query: 390 FSDEMLKDMFEKYGRITS 443
++ E L+ +F K+G ITS
Sbjct: 161 YNKETLEKLFAKFGNITS 178
Score = 78.6 bits (185), Expect = 2e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
NV++KN + + + F+ FGNI SC+V E G SKG+GFV F E A +++ +
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 209
Query: 261 NGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEM 404
+ + G K++V R + ER EL +K + N+YVKN E D+
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 269
Query: 405 LKDMFEKYGRITSHK 449
LK FE YG ITS K
Sbjct: 270 LKKQFESYGNITSAK 284
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/88 (37%), Positives = 55/88 (62%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N+++KNLD+T+D+ + F ++GNI S KV DE G SKG+GFV FE E A ++ ++
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEK 344
N ++ K +YV +++R +L +
Sbjct: 315 NSKMVCSKPLYVAIAQRKEDRRAQLASQ 342
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 218 bits (532), Expect = 2e-57
Identities = 99/138 (71%), Positives = 117/138 (84%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYG 209
R MWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FGNILSCKVA DE G SKGYG
Sbjct: 104 RIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYG 163
Query: 210 FVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGED 389
FVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKNFG+
Sbjct: 164 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 223
Query: 390 FSDEMLKDMFEKYGRITS 443
++ E L+ +F K+G ITS
Sbjct: 224 YNKETLEKLFAKFGNITS 241
Score = 78.6 bits (185), Expect = 2e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
NV++KN + + + F+ FGNI SC+V E G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 261 NGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEM 404
+ + G K++V R + ER EL +K + N+YVKN E D+
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 405 LKDMFEKYGRITSHK 449
LK FE YG ITS K
Sbjct: 333 LKKQFESYGNITSAK 347
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/88 (37%), Positives = 55/88 (62%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N+++KNLD+T+D+ + F ++GNI S KV DE G SKG+GFV FE E A ++ ++
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEK 344
N ++ K +YV +++R +L +
Sbjct: 378 NSKMVCSKPLYVAIAQRKEDRRAQLASQ 405
Score = 53.2 bits (122), Expect = 8e-08
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ ++++ +L ++ +++ FSA G +LS +V +D T S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 252 EKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYG 431
+ +N L+GK + + + R + G N+++KN + ++ + D F +G
Sbjct: 91 DTMNFEALHGKPMRI-MWSQRDPAMRRSGA-----GNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 432 RITSHK 449
I S K
Sbjct: 145 NILSCK 150
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 217 bits (531), Expect = 2e-57
Identities = 99/138 (71%), Positives = 117/138 (84%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYG 209
R MWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FGNILSCKVA DE G SKGYG
Sbjct: 104 RIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYG 163
Query: 210 FVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGED 389
FVHFETEEAA +I+KVNGMLL GKKV+VG+F PR +R +ELGE AK FTNVYVKNFG+
Sbjct: 164 FVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDH 223
Query: 390 FSDEMLKDMFEKYGRITS 443
++ E L+ +F K+G ITS
Sbjct: 224 YNKETLEKVFAKFGNITS 241
Score = 79.0 bits (186), Expect = 1e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
NV++KN + + + F+ FGNI SC+V E G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 261 NGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEM 404
+ + G K++V R + ER EL +K + N+YVKN E D+
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 405 LKDMFEKYGRITSHK 449
LK FE YG ITS K
Sbjct: 333 LKKQFESYGNITSAK 347
Score = 75.8 bits (178), Expect = 1e-14
Identities = 33/88 (37%), Positives = 55/88 (62%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N+++KNLD+T+D+ + F ++GNI S KV DE G SKG+GFV FE E A ++ ++
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEK 344
N ++ K +YV +++R +L +
Sbjct: 378 NSKMVCSKPLYVAIGQRKEDRRAQLASQ 405
Score = 53.2 bits (122), Expect = 8e-08
Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ ++++ +L ++ +++ FSA G +LS +V +D T S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 252 EKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYG 431
+ +N L+GK + + + R + G N+++KN + ++ + D F +G
Sbjct: 91 DTMNFEALHGKPMRI-MWSQRDPAMRRSGA-----GNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 432 RITSHK 449
I S K
Sbjct: 145 NILSCK 150
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 204 bits (499), Expect = 2e-53
Identities = 94/138 (68%), Positives = 110/138 (79%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYG 209
R MWSQRDP+ R++G GN+FIKNLD+ IDNK++YDTFS FGNILSCKVA D+ G SKGYG
Sbjct: 129 RIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYG 188
Query: 210 FVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGED 389
FVHFETE +A +IEKVNGMLL+ KKVYVG+F PR +R KELGE +TNV+VKNFGE
Sbjct: 189 FVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEH 248
Query: 390 FSDEMLKDMFEKYGRITS 443
E L MF K+G ITS
Sbjct: 249 LDQEKLSAMFSKFGEITS 266
Score = 91.5 bits (217), Expect = 3e-19
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Frame = +3
Query: 42 SQRDPSLRKSGVG--NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFV 215
+QR L +SG+ NVF+KN + +D + + FS FG I S V D G KG+GFV
Sbjct: 224 AQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFV 283
Query: 216 HFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------T 359
F ++AA +++EK+N +L G K+ V R + ER EL K +
Sbjct: 284 AFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV 343
Query: 360 NVYVKNFGEDFSDEMLKDMFEKYGRITSHK 449
N+YVKN ED +D+ L+D F +G ITS K
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 63 RKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAAN 242
R GV N+++KN+++ +++ + D FS+FG I S KV DE G SKG+GFV FE E A
Sbjct: 339 RYQGV-NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEAT 397
Query: 243 KSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 344
++ +N ++ K +YV +++R +L +
Sbjct: 398 AAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQ 431
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSI 251
+ +++I +L + +++ FS G +LS +V +D T S GY +V+F+ A +++
Sbjct: 56 MASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Query: 252 EKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYG 431
+ +N +++G+ + + + R + G N+++KN ++ + D F +G
Sbjct: 116 DTMNFEVIHGRPMRI-MWSQRDPAARRAGNG-----NIFIKNLDRVIDNKSVYDTFSLFG 169
Query: 432 RITSHK 449
I S K
Sbjct: 170 NILSCK 175
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 204 bits (499), Expect = 2e-53
Identities = 94/138 (68%), Positives = 110/138 (79%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYG 209
R MWSQRDP+ R++G GN+FIKNLD+ IDNK++YDTFS FGNILSCKVA D+ G SKGYG
Sbjct: 129 RIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYG 188
Query: 210 FVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGED 389
FVHFETE +A +IEKVNGMLL+ KKVYVG+F PR +R KELGE +TNV+VKNFGE
Sbjct: 189 FVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEH 248
Query: 390 FSDEMLKDMFEKYGRITS 443
E L MF K+G ITS
Sbjct: 249 LDQEKLSAMFSKFGEITS 266
Score = 91.5 bits (217), Expect = 3e-19
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Frame = +3
Query: 42 SQRDPSLRKSGVG--NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFV 215
+QR L +SG+ NVF+KN + +D + + FS FG I S V D G KG+GFV
Sbjct: 224 AQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFV 283
Query: 216 HFETEEAANKSIEKVNGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------T 359
F ++AA +++EK+N +L G K+ V R + ER EL K +
Sbjct: 284 AFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV 343
Query: 360 NVYVKNFGEDFSDEMLKDMFEKYGRITSHK 449
N+YVKN ED +D+ L+D F +G ITS K
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Score = 72.9 bits (171), Expect = 1e-13
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +3
Query: 63 RKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAAN 242
R GV N+++KN+++ +++ + D FS+FG I S KV DE G SKG+GFV FE E A
Sbjct: 339 RYQGV-NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEAT 397
Query: 243 KSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEK 344
++ +N ++ K +YV +++R +L +
Sbjct: 398 AAVTDMNSKMIGAKPLYVALAQRKEDRRAQLASQ 431
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSI 251
+ +++I +L + +++ FS G +LS +V +D T S GY +V+F+ A +++
Sbjct: 56 MASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
Query: 252 EKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYG 431
+ +N +++G+ + + + R + G N+++KN ++ + D F +G
Sbjct: 116 DTMNFEVIHGRPMRI-MWSQRDPAARRAGNG-----NIFIKNLDRVIDNKSVYDTFSLFG 169
Query: 432 RITSHK 449
I S K
Sbjct: 170 NILSCK 175
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 83.4 bits (197), Expect = 7e-17
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 28/151 (18%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ ++++ +L ++ +++ FSA G +LS +V +D T S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 252 -----EKVNG----------------------MLLNGKKVYVGRFIPRKEREKELGEKAK 350
E ++G + N KV+VG+F PR +R +ELGE AK
Sbjct: 91 DTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAK 150
Query: 351 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITS 443
FTNVYVKNFG+ ++ E L+ +F K+G ITS
Sbjct: 151 QFTNVYVKNFGDHYNKETLEKLFAKFGNITS 181
Score = 78.6 bits (185), Expect = 2e-15
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
NV++KN + + + F+ FGNI SC+V E G SKG+GFV F E A +++ +
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 212
Query: 261 NGMLLNGK--KVYVGRFIPRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEM 404
+ + G K++V R + ER EL +K + N+YVKN E D+
Sbjct: 213 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 272
Query: 405 LKDMFEKYGRITSHK 449
LK FE YG ITS K
Sbjct: 273 LKKQFESYGNITSAK 287
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/88 (37%), Positives = 55/88 (62%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N+++KNLD+T+D+ + F ++GNI S KV DE G SKG+GFV FE E A ++ ++
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEK 344
N ++ K +YV +++R +L +
Sbjct: 318 NSKMVCSKPLYVAIAQRKEDRRAQLASQ 345
Score = 51.2 bits (117), Expect = 3e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 30 RGMWSQRDPSLRKSGVGNVFIKNLDKTIDNK 122
R MWSQRDP++R+SG GN+FIKNLDK K
Sbjct: 104 RIMWSQRDPAMRRSGAGNIFIKNLDKVFVGK 134
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSC-KVAQD-ETGASKGYGFVHFETEEAANKSIE 254
N+F+ NLD +D K +YDTFSAFG IL K+ +D ++G SKG+ F++F + EA++ ++E
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 255 KVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 416
+NG L + + V R + + G A+ F +D ++ D+
Sbjct: 161 AMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDV 214
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSC-KVAQD-ETGASKGYGFVHFETEEAANKSIE 254
N+F+ NLD +D K +YDTFSAFG IL K+ +D ++G SKG+ F++F + EA++ ++E
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 255 KVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 416
+NG L + + V R + + G A+ F +D ++ D+
Sbjct: 171 AMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDV 224
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 69.7 bits (163), Expect = 9e-13
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L K + N+ + TF+ FG + KV +D +T SKGYGFV F ++ A +I
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 258 VNGMLLNGKKVYVGRFIPRKEREKELGEKA--KLF-------TNVYVKNFGEDFSDEMLK 410
+NG + GK+ + RK E+ + ++F T+VYV N + +D L+
Sbjct: 196 MNGKWI-GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLR 254
Query: 411 DMFEKYGRI 437
D+F YG I
Sbjct: 255 DLFSTYGDI 263
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/70 (27%), Positives = 39/70 (55%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
+V++ N+ + + + D FS +G+I ++ + + Y FV +E +E A K+I ++
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR-----YAFVRYEKKECATKAIMEM 292
Query: 261 NGMLLNGKKV 290
NG + G +V
Sbjct: 293 NGKEMAGNQV 302
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L +DN+ + + F FG++ KV +D T SKGYGFV + E A ++IE+
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 258 VNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF-------TNVYVKNFGEDFSD 398
+NG L G++ + RK E+ EK+ +++ T+VYV N D
Sbjct: 83 MNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 141
Query: 399 EMLKDMFEKYGRIT 440
E ++ F +GRIT
Sbjct: 142 E-IRQGFASFGRIT 154
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L +DN+ + + F FG++ KV +D T SKGYGFV + E A ++IE+
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 258 VNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF-------TNVYVKNFGEDFSD 398
+NG L G++ + RK E+ EK+ +++ T+VYV N D
Sbjct: 93 MNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 151
Query: 399 EMLKDMFEKYGRIT 440
E ++ F +GRIT
Sbjct: 152 E-IRQGFASFGRIT 164
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L +DN+ + + F FG++ KV +D T SKGYGFV + E A ++IE+
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 258 VNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF-------TNVYVKNFGEDFSD 398
+NG L G++ + RK E+ EK+ +++ T+VYV N D
Sbjct: 196 MNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 254
Query: 399 EMLKDMFEKYGRIT 440
E ++ F +GRIT
Sbjct: 255 E-IRQGFASFGRIT 267
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 14/134 (10%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L +DN+ + + F FG++ KV +D T SKGYGFV + E A ++IE+
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 258 VNGMLLNGKKVYVGRFIPRK----EREKELGEKA--KLF-------TNVYVKNFGEDFSD 398
+NG L G++ + RK E+ EK+ +++ T+VYV N D
Sbjct: 164 MNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 222
Query: 399 EMLKDMFEKYGRIT 440
E ++ F +GRIT
Sbjct: 223 E-IRQGFASFGRIT 235
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 62.1 bits (144), Expect = 2e-10
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 DPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFET 227
D SL + +F+ L + M + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 228 EEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 407
+ + ++ K +++GK V R +PR ++ + E +YV ED +++ML
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDML 130
Query: 408 KDMFEKYGRIT 440
+ F KYG +T
Sbjct: 131 TEYFTKYGTVT 141
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 62.1 bits (144), Expect = 2e-10
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 DPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFET 227
D SL + +F+ L + M + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 228 EEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 407
+ + ++ K +++GK V R +PR ++ + E +YV ED +++ML
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDML 130
Query: 408 KDMFEKYGRIT 440
+ F KYG +T
Sbjct: 131 TEYFTKYGTVT 141
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 62.1 bits (144), Expect = 2e-10
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Frame = +3
Query: 51 DPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFET 227
D SL + +F+ L + M + +S FG I V +D T S+G+GFV F
Sbjct: 14 DASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSG 73
Query: 228 EEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 407
+ + ++ K +++GK V R +PR ++ + E +YV ED +++ML
Sbjct: 74 KTEVDAAM-KQRPHIIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDML 130
Query: 408 KDMFEKYGRIT 440
+ F KYG +T
Sbjct: 131 TEYFTKYGTVT 141
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 59.3 bits (137), Expect = 1e-09
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+ I L + + + + F++ G I SCK+ +D+ TG S GYGFV++ EE A +++
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 258 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
NG+ L K + V P ++ K +N+YV + + L+ +F +G+I
Sbjct: 103 FNGLRLQNKTIKVSYARPSNDQIKG--------SNLYVSGIPKSMTLHELESIFRPFGQI 154
Query: 438 TSHK 449
+ +
Sbjct: 155 ITSR 158
Score = 48.4 bits (110), Expect = 2e-06
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+++ + K++ + F FG I++ ++ D TG SKG GFV F+ ++ A+ +I+
Sbjct: 129 NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
Query: 258 VNGMLLNG 281
+NG + +G
Sbjct: 189 LNGSIPSG 196
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+F+ NL D+ ++ FS FG I++ K+ +D T KGY FV A ++ +N
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 264 GMLLNGKKVYV 296
G L GK + V
Sbjct: 436 GTNLAGKTLQV 446
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 57.2 bits (132), Expect = 5e-09
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 63 RKSGVGN------VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHF 221
+ SGVGN VF+ N+ + + FS GN+LS K+ D ETG KGYGF+ F
Sbjct: 7 KSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Query: 222 ETEEAANKSIEKVNGMLLNGK 284
+ A +I +NG L+G+
Sbjct: 67 PDIQTAEVAIRNLNGYELSGR 87
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 56.4 bits (130), Expect = 9e-09
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N++I+ L ++ + + S +GNI S K D+ T KGYGFV FE+ +AA +++
Sbjct: 108 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 167
Query: 258 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+N G + + + + ++E++ TN+Y+ N DF+++ML+ K+G +
Sbjct: 168 LN---TEGVQAQMAK-LQQQEQDP---------TNLYIANLPLDFTEQMLETELNKFGMV 214
Query: 438 TS 443
S
Sbjct: 215 IS 216
Score = 35.5 bits (78), Expect = 0.018
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N++I NL + + + FG ++S ++ + S+G GF +++E I +
Sbjct: 189 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 248
Query: 261 NG 266
NG
Sbjct: 249 NG 250
Score = 32.3 bits (70), Expect = 0.17
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 357 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK 449
TN+Y++ + +D++L++M KYG I S K
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTK 137
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 56.4 bits (130), Expect = 9e-09
Identities = 35/122 (28%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N++I+ L ++ + + S +GNI S K D+ T KGYGFV FE+ +AA +++
Sbjct: 82 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 141
Query: 258 VNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+N G + + + + ++E++ TN+Y+ N DF+++ML+ K+G +
Sbjct: 142 LN---TEGVQAQMAK-LQQQEQDP---------TNLYIANLPLDFTEQMLETELNKFGMV 188
Query: 438 TS 443
S
Sbjct: 189 IS 190
Score = 35.5 bits (78), Expect = 0.018
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N++I NL + + + FG ++S ++ + S+G GF +++E I +
Sbjct: 163 NLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISAL 222
Query: 261 NG 266
NG
Sbjct: 223 NG 224
Score = 32.3 bits (70), Expect = 0.17
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 357 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK 449
TN+Y++ + +D++L++M KYG I S K
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTK 111
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + +TF+ FG ILS KV D+ T SK +GFV +E ++A +I
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 258 VNGMLLNGKKVYV 296
+NG + K++ V
Sbjct: 396 MNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + +TF+ FG ILS KV D+ T SK +GFV +E ++A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 258 VNGMLLNGKKVYV 296
+NG + K++ V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAA 239
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + +TF+ FG ILS KV D+ T SK +GFV +E ++A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 258 VNGMLLNGKKVYV 296
+NG + K++ V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAA 239
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + +TF+ FG ILS KV D+ T SK +GFV +E ++A +I
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 258 VNGMLLNGKKVYV 296
+NG + K++ V
Sbjct: 489 MNGFQIGSKRLKV 501
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAA 239
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 53.6 bits (123), Expect = 6e-08
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + +TF+ FG ILS KV D+ T SK +GFV +E ++A +I
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 258 VNGMLLNGKKVYV 296
+NG + K++ V
Sbjct: 560 MNGFQIGSKRLKV 572
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAA 239
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 53.6 bits (123), Expect = 6e-08
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +3
Query: 126 MYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGR 302
M + +S FG I V +D T S+G+GFV F + + ++ K +++GK V R
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKR 59
Query: 303 FIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 440
+PR ++ + E +YV ED +++ML + F KYG +T
Sbjct: 60 AVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVT 103
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 53.6 bits (123), Expect = 6e-08
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = +3
Query: 126 MYDTFSAFGNILSCKVAQDETGA-SKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGR 302
M + +S FG I V +D T S+G+GFV F + + ++ K +++GK V R
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM-KQRPHIIDGKTVDPKR 59
Query: 303 FIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 440
+PR ++ + E +YV ED +++ML + F KYG +T
Sbjct: 60 AVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVT 103
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 52.8 bits (121), Expect = 1e-07
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ +++ ++ I + F FG I S ++ D TG K + FV +E EAA +
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 252 EKVNGMLLNGKKVYVGRF----------IPRKEREKELGEK-AKLFTNVYVKNFGEDFSD 398
E +NG +L G+ + V +P+ + ++ +K AK + VYV + D S+
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 399 EMLKDMFEKYGRI 437
LK +FE +G I
Sbjct: 221 TDLKSVFEAFGEI 233
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 52.8 bits (121), Expect = 1e-07
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ +++ ++ I + F FG I S ++ D TG K + FV +E EAA +
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 252 EKVNGMLLNGKKVYVGRF----------IPRKEREKELGEK-AKLFTNVYVKNFGEDFSD 398
E +NG +L G+ + V +P+ + ++ +K AK + VYV + D S+
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 399 EMLKDMFEKYGRI 437
LK +FE +G I
Sbjct: 221 TDLKSVFEAFGEI 233
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGAS-KGYGFVHFETEEAANKSIEKV 260
V++ ++ + + F AFG I+ C++A+ TG +G+G++ F + +++I +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 261 NGMLLNGKKVYVGRFI 308
N L G+ + VG+ +
Sbjct: 269 NMFDLGGQYLRVGKCV 284
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 52.8 bits (121), Expect = 1e-07
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSI 251
+ +++ ++ I + F FG I S ++ D TG K + FV +E EAA +
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQ 160
Query: 252 EKVNGMLLNGKKVYVGRF----------IPRKEREKELGEK-AKLFTNVYVKNFGEDFSD 398
E +NG +L G+ + V +P+ + ++ +K AK + VYV + D S+
Sbjct: 161 ESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSE 220
Query: 399 EMLKDMFEKYGRI 437
LK +FE +G I
Sbjct: 221 TDLKSVFEAFGEI 233
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGAS-KGYGFVHFETEEAANKSIEKV 260
V++ ++ + + F AFG I+ C++A+ TG +G+G++ F + +++I +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 261 NGMLLNGKKVYVGRFI 308
N L G+ + VG+ +
Sbjct: 269 NMFDLGGQYLRVGKCV 284
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 50.8 bits (116), Expect = 4e-07
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+F+ NLD I ++ + F+ G ++ K+ + G + Y FV F A +++ N
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFE--GLNDPYAFVEFSDHNQATLALQSHN 99
Query: 264 GMLLNGKKVYVG-RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 440
G L K+++V F PR+ E + +V+V + + L++ F K+G ++
Sbjct: 100 GRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVS 159
Query: 441 SHK 449
K
Sbjct: 160 EAK 162
Score = 50.8 bits (116), Expect = 4e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
+VF+ +L ID+ + + F FG + K+ +D T KGYGFV + E A ++I++
Sbjct: 133 HVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDE 192
Query: 258 VNGMLLNGKKVYVGRFIPRKERE 326
+NG L G++ + RK E
Sbjct: 193 MNGAWL-GRRTIRTNWATRKPDE 214
Score = 30.7 bits (66), Expect = 0.51
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 198 KGYGFVHFETEEAANKSIEKVNGMLLNGKKV 290
+GY FV FET+E+A ++I ++N + G+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 50.0 bits (114), Expect = 8e-07
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDET-GASKGYGFVHFETEEAANKSIEKV 260
+F+ + ++N+ + F+ +G + +V D T G S+G+ FV F T E ++
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA-A 89
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+ GK V V P K RE + V+V D+S++ L+ FE++G++
Sbjct: 90 REQTIKGKSVEVK---PAKSRENK---------KVFVGGLPSDYSEQDLRSHFEQFGKV 136
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 50.0 bits (114), Expect = 8e-07
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDET-GASKGYGFVHFETEEAANKSIEKV 260
+F+ + ++N+ + F+ +G + +V D T G S+G+ FV F T E ++
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA-A 89
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+ GK V V P K RE + V+V D+S++ L+ FE++G++
Sbjct: 90 REQTIKGKSVEVK---PAKSRENK---------KVFVGGLPSDYSEQDLRSHFEQFGKV 136
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 1e-06
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 69 SGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANK 245
SG+ +V++ N + + + FS+ G I + ++ D ETG +G+ F+ F E +A +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 246 SIEKVNGMLLNGKKVYV 296
++E++NG NG+ + V
Sbjct: 62 AVEQMNGAEFNGRPLRV 78
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNI-LSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
VF++NL + + + S FG I L+ ++G SKG FVHF T A+ IE V
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 261 -NGMLLNGKKVYVGRFIPRKE---REKE-LGEKAKLFTNVYVKNFG 383
+G++++ + V IPRKE EKE L + K N+ + FG
Sbjct: 325 EDGVIIDNRLVKANLAIPRKEAADMEKEKLTKVPKDKRNLRLARFG 370
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 75 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSI 251
VGNV + ++ I N F+A G++ + ++ D ETG +G+ FV F E A +++
Sbjct: 10 VGNVPYQGTEEEIGNY-----FAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
Query: 252 EKVNGMLLNGKKVYV 296
E++NG+ NG+ + V
Sbjct: 65 EQLNGVAFNGRNLRV 79
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 48.4 bits (110), Expect = 2e-06
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +3
Query: 3 DPPGCRNSARGMWSQRDPSLRK-SGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQ 179
D G R R +R P+ R S V IKNL + + + + FS +G I + +
Sbjct: 108 DRSGSRQRRRAS-PRRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPP 166
Query: 180 DE--TGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK 317
D +GYG+V ++ E A KSI+ ++G ++G V+V I R+
Sbjct: 167 DRFHNHVHRGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGRQ 214
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 48.0 bits (109), Expect = 3e-06
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +3
Query: 69 SGVGNVFIKNLDKTIDNKAMYDTFSAFGN-ILSCKVAQDETGASKGYGFVHFETEEAANK 245
S + NVF++ + + + + +Y F + ++ C VA GYGFV F+T A K
Sbjct: 93 SNISNVFVRGISRDMPDTELYQAFGGITDGVVQCHVAD-------GYGFVLFDTRANAQK 145
Query: 246 SIEKVNGMLLNGKKVYVGRFIP---RKEREKELGEKA 347
I +++G LNGK + V P ++R++ + E++
Sbjct: 146 KIVEMDGKTLNGKLISVSWARPDTVGRKRKRPMSEES 182
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKV 260
VF+ N+ + ++D FS +G I + + D TG KGY V +ET++ AN++I++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 261 NGMLLNGKKVYV 296
N L G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/90 (26%), Positives = 46/90 (51%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
VF++N+ + + FS FG + S + + G KG FV F+TE +A K + +
Sbjct: 685 VFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGD 744
Query: 264 GMLLNGKKVYVGRFIPRKEREKELGEKAKL 353
++L +++ V P +++K G+ A +
Sbjct: 745 KLMLRERELEVALSNPPVKKDKSHGKPAAI 774
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+F+ NLD T + +I + A + +G+ +V E ++ A +++ K +
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDL-VHRGFAYVVMENDQKAQQALLK-D 652
Query: 264 GMLLNGKKVYVGRFIPRKEREKELGEKAKLF---TNVYVKNFGEDFSDEMLKDMFEKYGR 434
+ + G+ + FI + EK +G K + V+V+N +D+ LK +F K+G
Sbjct: 653 RVPVKGRPM----FISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFGT 708
Query: 435 ITS 443
+TS
Sbjct: 709 VTS 711
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEKV 260
+++ + + K + F FG++++ + D E+G +G+GFV F+ E A +I+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 261 NGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFG 383
N L GK + V P K E+ +K + ++K +G
Sbjct: 73 NESELFGKTIRVNFARPPKATER--SQKPVWADDEWLKKYG 111
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 46.8 bits (106), Expect = 7e-06
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + F+ FG+I+S KV D T SK +GFV ++ ++ +I
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 258 VNGMLLNGKKVYVGRFIPRKE 320
+NG + K++ V PR E
Sbjct: 490 MNGFQIGMKRLKVQLKRPRNE 510
Score = 30.3 bits (65), Expect = 0.68
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L K + F+ FG + V + GASKG FV ++ A+ +I ++
Sbjct: 126 LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALH 185
Query: 264 G 266
G
Sbjct: 186 G 186
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 46.8 bits (106), Expect = 7e-06
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEK 257
N+FI +L + + + F+ FG+I+S KV D T SK +GFV ++ ++ +I
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 258 VNGMLLNGKKVYVGRFIPRKE 320
+NG + K++ V PR E
Sbjct: 490 MNGFQIGMKRLKVQLKRPRNE 510
Score = 30.3 bits (65), Expect = 0.68
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L K + F+ FG + V + GASKG FV ++ A+ +I ++
Sbjct: 126 LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGASKGCAFVKYKHGLDAHMAISALH 185
Query: 264 G 266
G
Sbjct: 186 G 186
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEK 257
+V++ N + + FS GN+ + ++ D ETG +G+ FV F E AA +++++
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 258 VNGMLLNGKKVYV 296
NG+ NG+ + V
Sbjct: 65 FNGVDFNGRALRV 77
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +3
Query: 78 GNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIE 254
G +FI L + + D F FG + C V +D T ++G+GF+ F + +K +
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN 104
Query: 255 KVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGR 434
L+GKK+ P++ + K L K K V++ + E +K FE YG+
Sbjct: 105 N-REHELDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGK 159
Query: 435 I 437
+
Sbjct: 160 V 160
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +3
Query: 78 GNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIE 254
G +FI L + + D F FG + C V +D T ++G+GF+ F + +K +
Sbjct: 45 GKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLN 104
Query: 255 KVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGR 434
L+GKK+ P++ + K L K K V++ + E +K FE YG+
Sbjct: 105 N-REHELDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGK 159
Query: 435 I 437
+
Sbjct: 160 V 160
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.4 bits (100), Expect = 4e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Frame = +3
Query: 138 FSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPR 314
FSA G + ++ D TG SKG +V F EE+ + +NG L G + + R
Sbjct: 45 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA-LNGQRLMGAPLQIQRTCAE 103
Query: 315 KEREKE------LGEKA---KLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+ R LG A K T+V V+N ++M++D+FE +GRI
Sbjct: 104 RNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRI 153
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.4 bits (100), Expect = 4e-05
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Frame = +3
Query: 138 FSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPR 314
FSA G + ++ D TG SKG +V F EE+ + +NG L G + + R
Sbjct: 190 FSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA-LNGQRLMGAPLQIQRTCAE 248
Query: 315 KEREKE------LGEKA---KLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
+ R LG A K T+V V+N ++M++D+FE +GRI
Sbjct: 249 RNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRI 298
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 44.0 bits (99), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 96 NLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKVNGML 272
NL K + D F FG I C + D +G S+G+GF++F E A + +K+
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTD 141
Query: 273 LNGKKVYV 296
L+G K+ V
Sbjct: 142 LDGHKIRV 149
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 9e-05
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 78 GNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIE 254
G +F++NL + F +G + +V D+ TGA KG+ V F EAA +
Sbjct: 279 GRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYS 338
Query: 255 KVNGMLLNGKKVYVGRFIPRKEREKELGEK 344
++G + G+ +++ +P E+ + GE+
Sbjct: 339 ALDGYVFKGRMMHI---LPGDEKRTKEGEE 365
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 357 TNVYVKNFGEDFSDEMLKDMFEKYGRIT 440
T + VKN +++ L+ FEKYG+I+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQIS 30
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 42 SQRDPSLRKS--GVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFV 215
+Q DPS G + + N+ + + F FG + ++ +E G SKG+GFV
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFV 197
Query: 216 HFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREK 329
E + A ++ ++++G ++ G+K+ V R +K
Sbjct: 198 TMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/82 (20%), Positives = 39/82 (47%)
Frame = +3
Query: 51 DPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETE 230
+P + +F+ ++ + F A+G I + DE G +GY F+ + +
Sbjct: 95 NPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDK 154
Query: 231 EAANKSIEKVNGMLLNGKKVYV 296
+ + +K +G+ ++GK++ V
Sbjct: 155 AEMHTAYKKADGIKVDGKRLVV 176
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 41.9 bits (94), Expect = 2e-04
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 42 SQRDPSLRKS--GVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFV 215
+Q DPS G + + N+ + + F FG + ++ +E G SKG+GFV
Sbjct: 139 TQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFV 197
Query: 216 HFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREK 329
E + A ++ ++++G ++ G+K+ V R +K
Sbjct: 198 TMERPQDAERARQELHGSMIEGRKIEVNCATARVHSKK 235
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/72 (23%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEKV 260
+F+ L+ ++ + FS FG I +C++ +D +G S Y F+ F+ ++ ++ K+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 261 NGMLLNGKKVYV 296
+ +L++ ++++V
Sbjct: 303 DNVLIDDRRIHV 314
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/72 (23%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEKV 260
+F+ L+ ++ + FS FG I +C++ +D +G S Y F+ F+ ++ ++ K+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 261 NGMLLNGKKVYV 296
+ +L++ ++++V
Sbjct: 303 DNVLIDDRRIHV 314
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/72 (23%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEKV 260
+F+ L+ ++ + FS FG I +C++ +D +G S Y F+ F+ ++ ++ K+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 261 NGMLLNGKKVYV 296
+ +L++ ++++V
Sbjct: 234 DNVLIDDRRIHV 245
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 27 ARGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKG 203
+RG R + +G+ ++ I NL + TF +G+I + +D+ + SKG
Sbjct: 2 SRGGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKG 61
Query: 204 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 296
+GFV F A ++++ +G L++G+++ V
Sbjct: 62 FGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 41.5 bits (93), Expect = 3e-04
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 27 ARGMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKG 203
+RG R + +G+ ++ I NL + TF +G+I + +D+ + SKG
Sbjct: 2 SRGGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKG 61
Query: 204 YGFVHFETEEAANKSIEKVNGMLLNGKKVYV 296
+GFV F A ++++ +G L++G+++ V
Sbjct: 62 FGFVRFYERRDAEHALDRTDGKLVDGRELRV 92
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 40.7 bits (91), Expect = 5e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKV 260
V IK + K + F FGN+L +VA++ TG KG+ +V F+ + A + E +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
Query: 261 NGMLL 275
NG L+
Sbjct: 94 NGYLM 98
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/80 (23%), Positives = 44/80 (55%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+++ N+ + + + F A+G +LS ++ ++ G SKG+GFV ++ E+ K+ ++
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 264 GMLLNGKKVYVGRFIPRKER 323
+ G+ + V R P + +
Sbjct: 112 ESHVQGRIIEVRRATPTRRK 131
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/80 (23%), Positives = 44/80 (55%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+++ N+ + + + F A+G +LS ++ ++ G SKG+GFV ++ E+ K+ ++
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 264 GMLLNGKKVYVGRFIPRKER 323
+ G+ + V R P + +
Sbjct: 112 ESHVQGRIIEVRRATPTRRK 131
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 90 IKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKVN 263
+ NL + ++ + D F G ++ +A+D+ TG KG+ FV FE+ + A ++I ++N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 39.9 bits (89), Expect = 8e-04
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Frame = +3
Query: 18 RNSARGMWSQRDPSL--RKSGVGNVFIKNLDKTIDNKAMYDT-FSAFGNILSCKVAQD-E 185
R+ ARG+ + + R G K + K+ + F +G+I S + D +
Sbjct: 2 RSLARGVTTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPD 61
Query: 186 TGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIP--RKEREKEL 335
TG +G+ + F++++ ANK+IE+ +++G +V V +IP K ++K+L
Sbjct: 62 TGLHRGFASITFDSKDGANKAIEQ-RPHVIDGDRVDVEPYIPLISKNKKKDL 112
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.5 bits (88), Expect = 0.001
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEE---AANKSIE 254
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A K +
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 255 KVNGMLLNGKKVY 293
M L G + Y
Sbjct: 204 HSQTMELGGGQNY 216
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAA 239
+FI L K + + + + F+ FG+I C V +D+ G S+G FV F A
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCA 195
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/72 (22%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSIEKV 260
++I L + + FS +G +++ + +D +TG SKG+ F+ ++ + + +++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 261 NGMLLNGKKVYV 296
NG+ L+ + + V
Sbjct: 100 NGISLHKRMIRV 111
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFETEEAANKSIEKV 260
+F+ L +K +++ F FG+I V D T S+GYGFV + +A ++ +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 261 NGMLLNGKKVYV 296
N +++G+K V
Sbjct: 97 N-PIIDGRKANV 107
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 324 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
E +G + +FT ++V SD+ L + FE++G I
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDI 61
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 264 GMLLNGKKVYV 296
GM L K++ V
Sbjct: 353 GMQLGDKQLVV 363
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 264 GMLLNGKKVYV 296
GM L K++ V
Sbjct: 353 GMQLGDKQLVV 363
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 264 GMLLNGKKVYV 296
GM L K++ V
Sbjct: 328 GMQLGDKQLVV 338
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI L + + + +FG + + + D G SKGY F + +++I +N
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 264 GMLLNGKKVYV 296
GM L K++ V
Sbjct: 331 GMQLGDKQLVV 341
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 18 RNSARGMWSQRDPSLRKSGVGN--VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-T 188
R+ +W DPSL + + VF +L + ++ + F + + KV ++ T
Sbjct: 183 RSGGGQVWE--DPSLAEWDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRT 240
Query: 189 GASKGYGFVHFETEEAANKSIEKVNGMLLNGKKV 290
SKGYGFV F E +++ +++G + + +
Sbjct: 241 NKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPI 274
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANK 245
+F+ + + + F F + K+ + G SKGYGF+ FETE+ A +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.7 bits (81), Expect = 0.008
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +3
Query: 69 SGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKS 248
S V ++I+N+ + + + + + F + ++ D K Y F+HF + K+
Sbjct: 374 SKVKVLYIRNIKEAVTEEKLNELFKEYASL-------DRVKKVKDYAFIHFNERDDCLKA 426
Query: 249 IEKVNGMLLNGKKVYVGRFIPRKEREKE 332
+E+ NG L G V P +E++K+
Sbjct: 427 MEEWNGKELEGTVVEASLAKPPQEKKKK 454
Score = 29.9 bits (64), Expect = 0.89
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 54 PSLRKSGVGN-VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYGFVHFET 227
P+ +G G+ +++ ++ + + F G I ++ D +GAS+GY FV +
Sbjct: 191 PATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCN 250
Query: 228 EEAANKSIEKVNG 266
+E A + + +G
Sbjct: 251 KEDAAAAAKTYDG 263
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.7 bits (81), Expect = 0.008
Identities = 24/89 (26%), Positives = 44/89 (49%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
++IKNL I + MY+ F FG + +V T ++G FV +E A + E ++
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG--NTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 264 GMLLNGKKVYVGRFIPRKEREKELGEKAK 350
G ++ + + V + K ++ EKA+
Sbjct: 79 GYNVSNRYLVVLYYQATKAWKRMDTEKAR 107
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANK 245
+F+ + + + F F + K+ + G SKGYGF+ FETE+ A +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 36.3 bits (80), Expect = 0.010
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 57 SLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEA 236
S +K VF+ N+ ++ + + GN+ S K + G +G+GF HF E
Sbjct: 40 SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEG 99
Query: 237 ANKSIEKVNGMLLNGKKVYV 296
+++ ++ L KK+ V
Sbjct: 100 TLRALRILHEFHLGDKKLTV 119
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 36.3 bits (80), Expect = 0.010
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 57 SLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEA 236
S +K VF+ N+ ++ + + GN+ S K + G +G+GF HF E
Sbjct: 40 SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEG 99
Query: 237 ANKSIEKVNGMLLNGKKVYV 296
+++ ++ L KK+ V
Sbjct: 100 TLRALRILHEFHLGDKKLTV 119
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 138 FSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK 317
F G ++ ++ +E G SKG+GFV + + A+++ + NG + G++V V R
Sbjct: 2 FEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 318 EREK 329
+K
Sbjct: 61 HNKK 64
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 138 FSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK 317
F G ++ ++ +E G SKG+GFV + + A+++ + NG + G++V V R
Sbjct: 120 FEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 178
Query: 318 EREK 329
+K
Sbjct: 179 HNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 138 FSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRK 317
F G ++ ++ +E G SKG+GFV + + A+++ + NG + G++V V R
Sbjct: 120 FEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 178
Query: 318 EREK 329
+K
Sbjct: 179 HNKK 182
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 34.7 bits (76), Expect = 0.031
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 42 SQRDPSLRKSGVGNVFIKNLDKTIDNKA-MYDTFSAFGNILSCKVAQDETGASKGYGFVH 218
S +DP + ++ VFI N+ + I + + + F FG I++ A +G+GFV
Sbjct: 74 SSKDPHMIRA---RVFIGNIARAIITRDDIIELFRPFGKIIAVNYF-----AQQGFGFVQ 125
Query: 219 FETEEAANKSIEKVNGM 269
F +A++S +NGM
Sbjct: 126 FNEAGSADESCRSLNGM 142
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 34.3 bits (75), Expect = 0.042
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSA-FGNILSCKVAQD-ETGASKGYGFVHFETEEAANKSI 251
+F+ NL I A+ FSA G + + ++ +D +TG KG+ FV+F+ + + + ++
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.073
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
+FI NL + +Y+ F G I D+ G SKG + + A +++
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAVS--- 246
Query: 264 GMLLNGKKVYVGRFIPRKER-EKELGEK 344
+LNG++++ + + +R +KEL K
Sbjct: 247 --MLNGQRLFDRNLVVKMDRFDKELEHK 272
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 33.5 bits (73), Expect = 0.073
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDE-TGASKGYG 209
N+FI +L + + + +TF+ FG ILS KV D+ T SK +G
Sbjct: 77 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.096
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKG 203
+FI L K + + + + F+ FG+I C V +D+ G S+G
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
++I L + K + F +G I + G+GFV F+ + A ++ +N
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 264 GMLLNGKKVYVGRFIPR 314
G L G++V + PR
Sbjct: 58 GKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
++I L + K + F +G I + G+GFV F+ + A ++ +N
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 264 GMLLNGKKVYVGRFIPR 314
G L G++V + PR
Sbjct: 58 GKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVN 263
++I L + K + F +G I + G+GFV F+ + A ++ +N
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KNGFGFVEFDDKRDAEDAVHDLN 57
Query: 264 GMLLNGKKVYVGRFIPR 314
G L G++V + PR
Sbjct: 58 GKELGGERVILDYSKPR 74
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 63 RKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAAN 242
R S ++ + +D ++ F G ++ C++ + G SKG+GFV + N
Sbjct: 168 RDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQN 227
Query: 243 K 245
K
Sbjct: 228 K 228
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 0.29
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 183 ETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREK 329
++G+ KG+ +V FE E+ N +I +NG + + V R R ++
Sbjct: 48 DSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQRDRSDR 96
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 30.3 bits (65), Expect = 0.68
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 222 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 401
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 392 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 450
Query: 402 MLK 410
K
Sbjct: 451 YSK 453
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 30.3 bits (65), Expect = 0.68
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 222 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 401
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 458 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 516
Query: 402 MLK 410
K
Sbjct: 517 YSK 519
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 30.3 bits (65), Expect = 0.68
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFG--------NILSCKVAQDETGASKGYGFVHFETEEAA 239
V++ NL + I ++ S G N CK+ ++E G KG G + +E+
Sbjct: 181 VYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESV 240
Query: 240 NKSIEKVNGMLLNGKKVYV--------GRFIPRKEREKELGEKAKLFTNVYVKNF 380
+ ++G LNG++V V G F P ++R K + K + K F
Sbjct: 241 ELACNILDGANLNGREVKVEEARFEMKGDFDPARKRRKLTAAQKKRYMEQQNKIF 295
Score = 29.9 bits (64), Expect = 0.89
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 282 KKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRI 437
KKV +G KE +LG+K VYV N ED +DE + K G I
Sbjct: 157 KKVGLGAGEDAKEGWLDLGDKVHA---VYVSNLPEDITDEEFQKFMSKCGVI 205
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 30.3 bits (65), Expect = 0.68
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 222 ETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDE 401
E+ E K + + G +GK + V R I E +KE EK L + + +F E+F E
Sbjct: 333 ESLEKEYKGVSQEMGTF-SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFME 391
Query: 402 MLK 410
K
Sbjct: 392 YSK 394
>Z35595-10|CAA84634.2| 387|Caenorhabditis elegans Hypothetical
protein C01G6.3 protein.
Length = 387
Score = 29.5 bits (63), Expect = 1.2
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -3
Query: 203 SFRSTSFIL-CYFTAQYVPKC*ECVIHSFIVNSFVKVFNKNIPN--SR-LAQRRISLGPH 36
SFR+ Y + +P+ CV ++ +N FV FN N N SR L Q+RI
Sbjct: 21 SFRANGIEFEVYGEGRLIPEKQHCVPYTLDLNEFVNSFNTNNMNEYSRGLLQKRIFTSFD 80
Query: 35 ASCR 24
A CR
Sbjct: 81 AICR 84
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/81 (19%), Positives = 38/81 (46%)
Frame = +3
Query: 81 NVFIKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKV 260
N+ + ++ + + +Y F + + K+ + G+SKG GFV F + ++ ++
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 261 NGMLLNGKKVYVGRFIPRKER 323
+ + G ++ + R ER
Sbjct: 217 HRTKVGGCRIILKLAGSRGER 237
Score = 27.9 bits (59), Expect = 3.6
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +3
Query: 198 KGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 377
KGY F+ F T + A +++ +NG + G K + E N++V +
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFANDSYNPNSE-----FNLHVSS 162
Query: 378 FGEDFSDEMLKDMFEKY 428
+D +D L +F+KY
Sbjct: 163 VPDDMADAELYRIFDKY 179
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 363 VYVKNFGEDFSDEMLKDMFEKYGRI 437
VYV N D ++ ++D+F KYGRI
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI 35
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 29.1 bits (62), Expect = 1.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 363 VYVKNFGEDFSDEMLKDMFEKYGRI 437
VYV N D ++ ++D+F KYGRI
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI 35
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 2.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 201 GYGFVHFETEEAANKSIEKVNGMLLNGKKV 290
G+GFV F+ + A+ ++ +NG L G++V
Sbjct: 36 GFGFVDFQDQRDADDAVHDLNGKELCGERV 65
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 273 LNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMF 419
L+GKKVY K + +G K +F +VY K G+D + E +F
Sbjct: 148 LDGKKVYKVHL--DKSHQTNVGHKIGVFASVYRKLTGKDVTFEFPDPIF 194
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Frame = +3
Query: 84 VFIKNLDKTIDNKAMYDTFSAFGNILS------CKVAQD-ETGASKGYGFVHFETEEAAN 242
VF++ + T + + D FS G+I K+ D TG KG + F AA
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDASAAQ 262
Query: 243 KSIEKVNGMLLNG 281
++I NG G
Sbjct: 263 QAITMYNGQPFPG 275
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 94 LIKTFPTPDLRREGSRWDH-MPRAEFLQP 11
+I+ PT + + G RW H + ++E +QP
Sbjct: 596 IIELIPTEEYEKTGPRWSHDIKKSEIIQP 624
>U23484-17|AAK68296.1| 367|Caenorhabditis elegans Tudor domain plus
rrm motif protein1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +3
Query: 90 IKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGM 269
I+N+ K ++ ++ F FG + C+V GFV+ + A++ + +N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 270 LLNGK 284
L G+
Sbjct: 77 NLIGE 81
>AF303251-1|AAG50209.1| 367|Caenorhabditis elegans 2F713 protein.
Length = 367
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = +3
Query: 90 IKNLDKTIDNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGM 269
I+N+ K ++ ++ F FG + C+V GFV+ + A++ + +N
Sbjct: 17 IRNIPKAWNDWNLFHVFQNFGKVSYCRVVGQSNDGQVQLGFVNMMSVADADEVRKNLNDG 76
Query: 270 LLNGK 284
L G+
Sbjct: 77 NLIGE 81
>AC006708-8|AAF60429.3| 481|Caenorhabditis elegans Hypothetical
protein Y110A7A.15a protein.
Length = 481
Score = 27.9 bits (59), Expect = 3.6
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 163 LNMFPNAENVSYIALLSIVLSRFLI--KTFPTPDL 65
L PN NV YI+ +S ++ KTFP PDL
Sbjct: 130 LKASPNTTNVDYISFISEDGGYLMMRNKTFPAPDL 164
>U64604-1|AAF98623.1| 243|Caenorhabditis elegans Hypothetical
protein F49E7.2 protein.
Length = 243
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 414 YLSTFHLKNLLQNFLHKH 361
YLSTF +KNLL+ +H H
Sbjct: 133 YLSTFEMKNLLKIKIHLH 150
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 27.5 bits (58), Expect = 4.8
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +3
Query: 363 VYVKNFGEDFSDEMLKDMFEKYGRI 437
+YV NF E+ +E+L+++F + G +
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPV 39
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 27.1 bits (57), Expect = 6.3
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 90 IKNLDKTIDNKAMY-DTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEK-VN 263
I+ + + I N M+ D F + + + +TG +GFV E KSIE+ V+
Sbjct: 456 IRPISRNIFNLIMFLDPFDSDDRVFDDVIRNFQTGIHIRFGFVPILDEAKYGKSIEEAVD 515
Query: 264 GMLL-NGKKVY 293
M++ KKV+
Sbjct: 516 SMIVPPTKKVF 526
>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 27.1 bits (57), Expect = 6.3
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +3
Query: 90 IKNLDKTIDNKAMY-DTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEK-VN 263
I+ + + I N M+ D F + + + +TG +GFV E KSIE+ V+
Sbjct: 456 IRPISRNIFNLIMFLDPFDSDDRVFDDVIRNFQTGIHIRFGFVPILDEAKYGKSIEEAVD 515
Query: 264 GMLL-NGKKVY 293
M++ KKV+
Sbjct: 516 SMIVPPTKKVF 526
>U42838-1|AAB52492.2| 398|Caenorhabditis elegans Hypothetical
protein T08G2.2 protein.
Length = 398
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 90 IKNLDKTIDNKAMYDTFSAFGNILSCKVAQDET 188
IKN DK N YDT+ A+ + CK+A T
Sbjct: 247 IKNCDKYWHNSTGYDTYMAY--VTCCKLALGAT 277
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 26.6 bits (56), Expect = 8.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2
Query: 399 HLKNLLQNFLHKHW 358
H+K L+ NF+HK W
Sbjct: 450 HIKGLIVNFIHKFW 463
>AF100305-1|AAC68918.1| 197|Caenorhabditis elegans Hypothetical
protein W04B5.4 protein.
Length = 197
Score = 26.6 bits (56), Expect = 8.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 219 FETEEAANKSIEKVNGMLL---NGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKN 377
F T A N E + G + N K+ G+ RKE ++L +K L+ +VY +N
Sbjct: 131 FSTSLAPNGQCEVIQGGHVASENDLKLADGKQWTRKELGRDLNKKYHLYQSVYEQN 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,457,374
Number of Sequences: 27780
Number of extensions: 207695
Number of successful extensions: 732
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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