Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D02
         (404 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    25   0.79 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   1.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   1.4  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   4.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   7.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   7.4  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    22   9.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   9.8  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 25.4 bits (53), Expect = 0.79
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 357 VVGKVSGNPSTNHKINTAIPSHTLRVPLRRR 265
           +V  V  +  TN+ +NT+IP+H  ++  R+R
Sbjct: 194 IVTPVPRSLRTNNVLNTSIPNHGSQMQSRKR 224


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -2

Query: 340 REPIYQSQDQYGNSQSHSPGPPQTATQDLPRSPNGKALN 224
           ++ ++ S  QY     H P PP T   ++    N    N
Sbjct: 70  QQQLHHSPHQYHQQVQHQPQPPSTPFANVSTGQNESLAN 108


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/39 (25%), Positives = 16/39 (41%)
 Frame = -2

Query: 340 REPIYQSQDQYGNSQSHSPGPPQTATQDLPRSPNGKALN 224
           ++ ++ S  QY     H P PP T   ++    N    N
Sbjct: 71  QQQLHHSPHQYHQQVQHQPQPPSTPFANVSTGQNESLAN 109


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 253 PRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
           P SP+G       S+ +PA +    RS + P+
Sbjct: 840 PFSPSGGTTPVPVSLLSPASSHYSQRSARSPY 871


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 68  KGQPSEGRYTPWPP 109
           +G P++  Y  WPP
Sbjct: 700 RGAPTDTEYESWPP 713


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -2

Query: 262 QDLPRSPNGKALNAATSIHNPAHNTQVHR 176
           QDLPR  N  AL        P H  Q  R
Sbjct: 352 QDLPRERNPTALKTIIEQLFPNHEPQTPR 380


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 193 YEQDCECWWR 222
           YEQDCE  W+
Sbjct: 106 YEQDCEPIWK 115


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 9.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 289 SPGPPQTATQDLPR 248
           SPGPP+T   +L R
Sbjct: 445 SPGPPETDRAELER 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,134
Number of Sequences: 2352
Number of extensions: 10031
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32494788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)