Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_D02
(404 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein. 34 0.21
D11117-1|BAA01891.1| 416|Homo sapiens homeodomain protein protein. 34 0.21
BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein. 34 0.21
BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein. 34 0.21
BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein. 30 3.4
AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B pr... 30 3.4
AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein. 30 3.4
AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like pro... 30 3.4
AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threoni... 30 3.4
AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein. 30 3.4
U35373-1|AAB33572.1| 389|Homo sapiens DXS8237E protein. 29 5.9
BC113862-1|AAI13863.1| 487|Homo sapiens aldehyde dehydrogenase ... 29 5.9
BC028198-1|AAH28198.1| 669|Homo sapiens EF-hand domain family, ... 29 5.9
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 29 5.9
AL445190-2|CAI95158.1| 487|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AL445190-1|CAI95159.1| 433|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AL021939-2|CAI20305.1| 487|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AL021939-1|CAI20306.1| 433|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AK223053-1|BAD96773.1| 597|Homo sapiens cell division cycle 2-l... 29 5.9
AK222848-1|BAD96568.1| 433|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AK097644-1|BAC05131.1| 630|Homo sapiens protein ( Homo sapiens ... 29 5.9
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 29 5.9
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 29 5.9
AF303134-1|AAG42417.1| 487|Homo sapiens aldehyde dehydrogenase ... 29 5.9
AC006023-1|AAD54514.1| 727|Homo sapiens WUGSC:H_DJ1147A01.1 pro... 29 5.9
AB058694-1|BAB47420.1| 653|Homo sapiens KIAA1791 protein protein. 29 5.9
U85193-1|AAB41899.1| 420|Homo sapiens nuclear factor I-B2 protein. 29 7.8
BT007266-1|AAP35930.1| 420|Homo sapiens nuclear factor I/B prot... 29 7.8
BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein. 29 7.8
BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein. 29 7.8
BC043522-1|AAH43522.1| 410|Homo sapiens NBPF5 protein protein. 29 7.8
BC024324-1|AAH24324.1| 440|Homo sapiens TNRC6A protein protein. 29 7.8
BC001283-1|AAH01283.1| 420|Homo sapiens nuclear factor I/B prot... 29 7.8
AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein. 29 7.8
AL441963-7|CAH71973.1| 487|Homo sapiens nuclear factor I/B prot... 29 7.8
AL441963-6|CAH71971.1| 494|Homo sapiens nuclear factor I/B prot... 29 7.8
AL441963-5|CAH71970.1| 561|Homo sapiens nuclear factor I/B prot... 29 7.8
AL441963-4|CAH71972.1| 420|Homo sapiens nuclear factor I/B prot... 29 7.8
AL441963-3|CAH71974.1| 570|Homo sapiens nuclear factor I/B prot... 29 7.8
AL441963-2|CAH71969.1| 168|Homo sapiens nuclear factor I/B prot... 29 7.8
AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar t... 29 7.8
AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar t... 29 7.8
AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein. 29 7.8
AL136366-5|CAH73583.1| 487|Homo sapiens nuclear factor I/B prot... 29 7.8
AL136366-4|CAH73585.1| 494|Homo sapiens nuclear factor I/B prot... 29 7.8
AL136366-3|CAH73584.1| 561|Homo sapiens nuclear factor I/B prot... 29 7.8
AL136366-2|CAH73586.1| 420|Homo sapiens nuclear factor I/B prot... 29 7.8
AL136366-1|CAH73587.1| 570|Homo sapiens nuclear factor I/B prot... 29 7.8
AK131233-1|BAD18416.1| 446|Homo sapiens protein ( Homo sapiens ... 29 7.8
AK001773-1|BAA91899.1| 440|Homo sapiens protein ( Homo sapiens ... 29 7.8
AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein. 29 7.8
AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein. 29 7.8
>Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTATQDLPRSPNGKA--LNAATSIHNPAH-NTQVHRSCKEP 161
++ D YG S H P PP A L G A + ++ + PAH +++ SC P
Sbjct: 36 KTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRP 93
>D11117-1|BAA01891.1| 416|Homo sapiens homeodomain protein protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTATQDLPRSPNGKA--LNAATSIHNPAH-NTQVHRSCKEP 161
++ D YG S H P PP A L G A + ++ + PAH +++ SC P
Sbjct: 20 KTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRP 77
>BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTATQDLPRSPNGKA--LNAATSIHNPAH-NTQVHRSCKEP 161
++ D YG S H P PP A L G A + ++ + PAH +++ SC P
Sbjct: 36 KTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRP 93
>BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.21
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTATQDLPRSPNGKA--LNAATSIHNPAH-NTQVHRSCKEP 161
++ D YG S H P PP A L G A + ++ + PAH +++ SC P
Sbjct: 36 KTTDTYGYSTPHQPYPPPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRP 93
>BC016681-1|AAH16681.1| 473|Homo sapiens BRSK1 protein protein.
Length = 473
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 175 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 217
>AY505124-1|AAS86442.1| 778|Homo sapiens protein kinase SAD-B
protein.
Length = 778
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 480 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 522
>AY458602-1|AAS10354.1| 778|Homo sapiens SAD1 kinase protein.
Length = 778
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 480 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 522
>AF479827-1|AAL87698.1| 778|Homo sapiens protein kinase-like
protein protein.
Length = 778
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 480 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 522
>AF479826-1|AAL87697.1| 794|Homo sapiens putative serine/threonine
protein kinase protein.
Length = 794
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 496 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 538
>AB058714-1|BAB47440.1| 715|Homo sapiens KIAA1811 protein protein.
Length = 715
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/43 (27%), Positives = 17/43 (39%)
Frame = -2
Query: 322 SQDQYGNSQSHSPGPPQTATQDLPRSPNGKALNAATSIHNPAH 194
S+ G P PP + LP P + T +H+P H
Sbjct: 417 SRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLH 459
>U35373-1|AAB33572.1| 389|Homo sapiens DXS8237E protein.
Length = 389
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 336 NPSTNHKINTAIPSHTLRVPLRRRPKTCLVPQMGRLLTPPPAFTILL 196
NP+ + T++P+ T+ R P T + P+ +TP P+ T +L
Sbjct: 17 NPTASTLFPTSLPTSTM-----RPPATTMTPRPASTMTPTPSITTML 58
>BC113862-1|AAI13863.1| 487|Homo sapiens aldehyde dehydrogenase 8
family, member A1 protein.
Length = 487
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>BC028198-1|AAH28198.1| 669|Homo sapiens EF-hand domain family,
member B protein.
Length = 669
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 300 PSHTLRVPLRRRPKTCLVPQMGRLLTPPPA 211
PS +P+ R TCL ++ RL+TPP A
Sbjct: 98 PSAGKVIPVGYRVATCLTEKLPRLITPPEA 127
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like 5
(cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 1375 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 1406
>AL445190-2|CAI95158.1| 487|Homo sapiens aldehyde dehydrogenase 8
family, member A1 protein.
Length = 487
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AL445190-1|CAI95159.1| 433|Homo sapiens aldehyde dehydrogenase 8
family, member A1 protein.
Length = 433
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AL021939-2|CAI20305.1| 487|Homo sapiens aldehyde dehydrogenase 8
family, member A1 protein.
Length = 487
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AL021939-1|CAI20306.1| 433|Homo sapiens aldehyde dehydrogenase 8
family, member A1 protein.
Length = 433
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AK223053-1|BAD96773.1| 597|Homo sapiens cell division cycle 2-like
5 isoform 2 variant protein.
Length = 597
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 460 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 491
>AK222848-1|BAD96568.1| 433|Homo sapiens aldehyde dehydrogenase 8A1
isoform 2 variant protein.
Length = 433
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AK097644-1|BAC05131.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ40325 fis, clone TESTI2031007. ).
Length = 630
Score = 29.1 bits (62), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 300 PSHTLRVPLRRRPKTCLVPQMGRLLTPPPA 211
PS +P+ R TCL ++ RL+TPP A
Sbjct: 260 PSAGKVIPVGYRVATCLTEKLPRLITPPEA 289
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 1315 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 1346
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 1375 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 1406
>AF303134-1|AAG42417.1| 487|Homo sapiens aldehyde dehydrogenase 12
protein.
Length = 487
Score = 29.1 bits (62), Expect = 5.9
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 343 VREPIYQSQDQYGNSQSHSPGPPQTA--TQDLPRSPNGKALNAATSIHNPAHNTQV-HRS 173
V + + QS +++ ++S G T D+PRS A++S+H+ + TQ+ H
Sbjct: 76 VADLLEQSLEEFAQAESKDQGKTLALARTMDIPRSVQNFRFFASSSLHHTSECTQMDHLG 135
Query: 172 C 170
C
Sbjct: 136 C 136
>AC006023-1|AAD54514.1| 727|Homo sapiens WUGSC:H_DJ1147A01.1
protein.
Length = 727
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 590 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 621
>AB058694-1|BAB47420.1| 653|Homo sapiens KIAA1791 protein protein.
Length = 653
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 325 QSQDQYGNSQSHSPGPPQTA--TQDLPRSPNG 236
QS D Y + SHS GPPQ + ++ P S G
Sbjct: 516 QSLDNYSTASSHSGGPPQPSAFSESFPSSVAG 547
>U85193-1|AAB41899.1| 420|Homo sapiens nuclear factor I-B2 protein.
Length = 420
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>BT007266-1|AAP35930.1| 420|Homo sapiens nuclear factor I/B
protein.
Length = 420
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>BC125162-1|AAI25163.1| 544|Homo sapiens NBPF4 protein protein.
Length = 544
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 177 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 233
>BC125161-1|AAI25162.1| 573|Homo sapiens NBPF4 protein protein.
Length = 573
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 177 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 233
>BC043522-1|AAH43522.1| 410|Homo sapiens NBPF5 protein protein.
Length = 410
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 236 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 292
>BC024324-1|AAH24324.1| 440|Homo sapiens TNRC6A protein protein.
Length = 440
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 GTTKGQPSEGRYTPWPPMRNLTP 127
G++ G+ S GR T W ++NLTP
Sbjct: 246 GSSWGESSSGRITNWLVLKNLTP 268
>BC001283-1|AAH01283.1| 420|Homo sapiens nuclear factor I/B
protein.
Length = 420
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AY035864-1|AAK62026.1| 1709|Homo sapiens GW182 autoantigen protein.
Length = 1709
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 GTTKGQPSEGRYTPWPPMRNLTP 127
G++ G+ S GR T W ++NLTP
Sbjct: 1515 GSSWGESSSGRITNWLVLKNLTP 1537
>AL441963-7|CAH71973.1| 487|Homo sapiens nuclear factor I/B
protein.
Length = 487
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL441963-6|CAH71971.1| 494|Homo sapiens nuclear factor I/B
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL441963-5|CAH71970.1| 561|Homo sapiens nuclear factor I/B
protein.
Length = 561
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL441963-4|CAH71972.1| 420|Homo sapiens nuclear factor I/B
protein.
Length = 420
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL441963-3|CAH71974.1| 570|Homo sapiens nuclear factor I/B
protein.
Length = 570
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL441963-2|CAH71969.1| 168|Homo sapiens nuclear factor I/B
protein.
Length = 168
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 61 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 89
>AL392088-1|CAI23469.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 188 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 244
>AL390038-2|CAH70399.1| 649|Homo sapiens novel protein similar to
FLJ32883 containing DUF1220 domains protein.
Length = 649
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 188 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 244
>AL359258-3|CAI14514.1| 638|Homo sapiens novel protein protein.
Length = 638
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -2
Query: 319 QDQYGNSQSHSPGPPQ---TATQDLPRSPNGKALNAATSIHNPAHNTQVHRSCKEPF 158
+D+ SP P + T +++P+ + ++ HNP+++ Q HRS K F
Sbjct: 177 KDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITF 233
>AL136366-5|CAH73583.1| 487|Homo sapiens nuclear factor I/B
protein.
Length = 487
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL136366-4|CAH73585.1| 494|Homo sapiens nuclear factor I/B
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL136366-3|CAH73584.1| 561|Homo sapiens nuclear factor I/B
protein.
Length = 561
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL136366-2|CAH73586.1| 420|Homo sapiens nuclear factor I/B
protein.
Length = 420
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AL136366-1|CAH73587.1| 570|Homo sapiens nuclear factor I/B
protein.
Length = 570
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 313 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 341
>AK131233-1|BAD18416.1| 446|Homo sapiens protein ( Homo sapiens
cDNA FLJ16142 fis, clone BRAMY2035718, highly similar
to NUCLEAR FACTOR 1-B. ).
Length = 446
Score = 28.7 bits (61), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 326 PITRSIRQFPVTLSGSPSDGDPRLASFPK 240
P T + P+ S SP D PRL++FP+
Sbjct: 339 PTTMKKPEKPLFSSASPQDSSPRLSTFPQ 367
>AK001773-1|BAA91899.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10911 fis, clone OVARC1000148. ).
Length = 440
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 GTTKGQPSEGRYTPWPPMRNLTP 127
G++ G+ S GR T W ++NLTP
Sbjct: 246 GSSWGESSSGRITNWLVLKNLTP 268
>AJ492221-1|CAD37348.1| 1962|Homo sapiens EDIE protein protein.
Length = 1962
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 GTTKGQPSEGRYTPWPPMRNLTP 127
G++ G+ S GR T W ++NLTP
Sbjct: 1768 GSSWGESSSGRITNWLVLKNLTP 1790
>AB040893-1|BAA95984.1| 1400|Homo sapiens KIAA1460 protein protein.
Length = 1400
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 59 GTTKGQPSEGRYTPWPPMRNLTP 127
G++ G+ S GR T W ++NLTP
Sbjct: 1206 GSSWGESSSGRITNWLVLKNLTP 1228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,637,343
Number of Sequences: 237096
Number of extensions: 1636235
Number of successful extensions: 6116
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 5712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6115
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -