Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D02
         (404 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   1.00 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   1.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   2.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   2.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   2.3  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    21   4.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   9.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   9.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   9.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   9.3  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 1.00
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 138 RILLGVKFRIGGQGVYLPSDG*PLVVPFREWAKSE 34
           RI  GV   +G     +  DG PL+ P+  W+ ++
Sbjct: 79  RIQDGVPLTLGYVTREVSIDGNPLIAPYPNWSYND 113



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 272 DGDPRLASFPKW 237
           DG+P +A +P W
Sbjct: 98  DGNPLIAPYPNW 109


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 328 YQSQDQYGNSQSHSPGPPQT 269
           Y +  Q G++  H P PP+T
Sbjct: 453 YPAAIQIGHTPHHHPHPPET 472


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 175 SCKEPFFLRNKM*NFARCQIPHWGPGSIPALGRL 74
           SCKE F L     + A  + P W   S   +GR+
Sbjct: 106 SCKETFSLLYYEFDVATKEPPPWETDSYKLIGRI 139


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 289 SPGPPQTATQDLPRSPNGKAL 227
           +PGP     +D PRS   K+L
Sbjct: 57  NPGPGSKGPRDFPRSHRFKSL 77


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 329 LPITRSIRQFPVTLSGSPSDGDPRLASFPK 240
           +PI RS+ + P    G  +D D R  S  +
Sbjct: 185 IPIVRSLSKSPPNDEGIETDSDRRKGSIAR 214


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 351 GKVSGNPSTNHKI 313
           GK+  NPSTN+++
Sbjct: 845 GKIELNPSTNYRV 857


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -3

Query: 351 GKVSGNPSTNHKI 313
           GK+  NPSTN+++
Sbjct: 841 GKIELNPSTNYRV 853


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = -2

Query: 214 SIHNPAHNTQVHRSCK-EPFFLRNK 143
           S+H+  HN  VHR  K E   L +K
Sbjct: 21  SVHHCHHNGVVHRDLKPENLLLASK 45


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 44   AHSRKGTTKGQPSEGRYTPWP 106
            AHSR G+       GRY+  P
Sbjct: 1771 AHSRSGSQSMPRQNGRYSRVP 1791


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
 Frame = -2

Query: 283 GPPQTATQDLPRSPNGKALN-AATSIHNPAH 194
           GPP  +    PR P    +N      H+P +
Sbjct: 129 GPPSVSLSSPPREPGTPRINFTKLKRHHPRY 159


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 290 LSGSPSDGDPRLASFPKW 237
           +S    DG P L  +P W
Sbjct: 93  ISKKVGDGGPLLQPYPDW 110



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 81  DG*PLVVPFREWA 43
           DG PL+ P+ +W+
Sbjct: 99  DGGPLLQPYPDWS 111


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 290 LSGSPSDGDPRLASFPKW 237
           ++    +G P LA +P W
Sbjct: 91  ITNKTGNGGPLLAPYPDW 108


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 290 LSGSPSDGDPRLASFPKW 237
           +S    DG P L  +P W
Sbjct: 93  ISKKVGDGGPLLQPYPDW 110



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 81  DG*PLVVPFREWA 43
           DG PL+ P+ +W+
Sbjct: 99  DGGPLLQPYPDWS 111


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -1

Query: 290 LSGSPSDGDPRLASFPKW 237
           +S    DG P L  +P W
Sbjct: 93  ISKKVGDGGPLLQPYPDW 110



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 81  DG*PLVVPFREWA 43
           DG PL+ P+ +W+
Sbjct: 99  DGGPLLQPYPDWS 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,255
Number of Sequences: 438
Number of extensions: 3600
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)