Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_D01
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      26   0.24 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.2  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   9.2  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   9.2  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 94  QHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETI 195
           +H+VG IV  V  ++ SFN T  +V D   RE I
Sbjct: 21  EHMVGTIVVVVRGVWVSFNQTAQNV-DTFVREQI 53


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 10  EVSKLKAKPWPLRKNKVAKE 69
           EV+ L+ + W L KNKV  +
Sbjct: 396 EVTVLEIEDWVLLKNKVTSD 415


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 152 SLKEANMCATPNTISPTK 99
           ++ E   C+TP   SPTK
Sbjct: 427 NVNENQDCSTPTENSPTK 444


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = -2

Query: 462 PACGVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVT 340
           P    R H     N      G  E   SR     ++LCL++
Sbjct: 36  PRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = -2

Query: 462 PACGVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVT 340
           P    R H     N      G  E   SR     ++LCL++
Sbjct: 36  PRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMS 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.130    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,254
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)