Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C24
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    24   0.74 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   1.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.7  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.7  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   4.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   6.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   6.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   6.9  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   9.2  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 95 ANWSVHVSHYHGYRCNIYCSYSTW 24
          A + +HV H HG    + C  ++W
Sbjct: 10 ALFCLHVQHSHGATDKVICYVASW 33



 Score = 21.0 bits (42), Expect = 5.2
 Identities = 5/15 (33%), Positives = 9/15 (60%)
 Frame = -2

Query: 164 DYHSSGISSSVCDHV 120
           +YH   I  ++C H+
Sbjct: 42  EYHPKNIDPNICTHI 56


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 443 SQQRPNGQLPDASSTYPDTRG*A*SYPHISS 351
           S   P+G  P  SS+   T   A  YP++S+
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARMYPYVSA 66


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 443 SQQRPNGQLPDASSTYPDTRG*A*SYPHISS 351
           S   P+G  P  SS+   T   A  YP++S+
Sbjct: 36  SSSSPSGSSPQHSSSSASTSPAARMYPYVSA 66


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 226 WHNSRRQRCHNLWRFN 179
           WHN+     +N WR N
Sbjct: 376 WHNNNGNNSNNHWRKN 391


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 196 NLWRFNVRRWRIITPAGFLLPFAITFRLGLLVALRTG 86
           ++W F V  W I+T  G   P+       LL  L++G
Sbjct: 676 DVWSFGVLLWEIVTLGG--TPYVGVHSSELLDFLKSG 710


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +1

Query: 205 VASGNYARSQVGENR*GRFKVDERESKQPSPDAVRDDQLRHHGTKPR 345
           +ASG+Y          G FKV   E   P+PD    D      T  R
Sbjct: 75  LASGDYTVPAGCTVVIGTFKVHRLEEYYPNPDKFDPDNFLPERTANR 121


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 316 QLRHHGTKP 342
           ++RHHG KP
Sbjct: 25  RIRHHGDKP 33


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 238 QLGTWHNSRRQRCHNLWR 185
           ++GTW  + R+  + LW+
Sbjct: 133 EVGTWIRAVRKCLYKLWK 150


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 238 QLGTWHNSRRQRCHNLWR 185
           ++GTW  + R+  + LW+
Sbjct: 133 EVGTWIRAVRKCLYKLWK 150


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 123 VIANGRRNPAGVIILHRRTLNRHRLWH 203
           V  NG   P G   L  +++N H + H
Sbjct: 143 VTQNGVLGPTGSPPLTTQSMNNHHMGH 169


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 161 NPPPADIKPP*VMAPLPPGIMPGP 232
           +PPP    PP  +    P   PGP
Sbjct: 279 SPPPHVYNPPDHIQQATPYSAPGP 302


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 123 VIANGRRNPAGVIILHRRTLNRHRLWH 203
           V  NG   P G   L  +++N H + H
Sbjct: 145 VTQNGVLGPTGSPPLTTQSMNNHHMGH 171


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 178 VRRWRIITPAGFLLPFAI 125
           +R +  IT +  LLPFAI
Sbjct: 41  IRSFLNITASAVLLPFAI 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,842
Number of Sequences: 336
Number of extensions: 2048
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)