Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C24
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 31 0.28
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 29 1.1
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 29 1.1
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 3.5
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 3.5
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 27 8.1
U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related ge... 27 8.1
U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related ge... 27 8.1
U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein. 27 8.1
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 8.1
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.28
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +2
Query: 158 DNPPPADIK----PP*VMAPLPPGIMPGPKLAKIDEEGLKLTNVN 280
D PPP D+ PP PLPP + P P L+ + EG+++ N
Sbjct: 26 DQPPPQDLPGLQDPPLTPLPLPPLLCPHP-LSLLTWEGIQIPTTN 69
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 314 SSRTASGLGCFDSRSSTLNLPHRFSP 237
S ++AS C + SST ++PH++SP
Sbjct: 524 SDKSASSSSCKNDASSTSSVPHKYSP 549
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 314 SSRTASGLGCFDSRSSTLNLPHRFSP 237
S ++AS C + SST ++PH++SP
Sbjct: 524 SDKSASSSSCKNDASSTSSVPHKYSP 549
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 314 SSRTASGLGCFDSRSSTLNLPHRFSP 237
S ++AS C + SST ++PH++SP
Sbjct: 524 SDKSASSSSCKNDASSTSSVPHKYSP 549
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = -2
Query: 74 SHYHGYRCNIYCSYST---WNC 18
S+YHG RCN YC + W C
Sbjct: 134 SNYHGKRCNRYCIANAKLHWEC 155
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = -2
Query: 74 SHYHGYRCNIYCSYST---WNC 18
S+YHG RCN YC + W C
Sbjct: 134 SNYHGKRCNRYCIANAKLHWEC 155
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 27.5 bits (58), Expect = 4.6
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Frame = +2
Query: 164 PPPADIKPP*VMAPLPP---GIMPGPKLAKIDEEGLKLTNVNRNNQALMQYAMTNFGTTA 334
PPP + PP V PP +P PK + + +G K N+ L Q+ G
Sbjct: 125 PPPVYVTPPPVYITPPPTTTTTIPPPKCFQ-NTQGYKCC-----NRQLDQFLEQKVG-EM 177
Query: 335 LSPEDWKKCE-DNFKLNLLYQDMLTKRQEVDRLAAAG 442
L PE W++C F L ++ ++ + A+G
Sbjct: 178 LKPE-WQRCNLQRFATQLQHETQQMFNHSMEAIVASG 213
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 87 PVRKATRSPSLNVIANGRRNPAGVIILHRR 176
PV P+LN+IA+G P VI + RR
Sbjct: 471 PVLATDSHPTLNIIASGGLEPDNVIRIWRR 500
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 8.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 189 HRLWHRCLRELCQVPSW 239
H W+RC ELC+ W
Sbjct: 450 HEAWNRCSIELCKAARW 466
>U58738-3|AAQ81272.1| 349|Caenorhabditis elegans Apex-related genes
protein 1, isoformb protein.
Length = 349
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -2
Query: 86 SVHVSHYHGYRCNIYCSYST---WNC 18
+V S+Y+G RCN YC S W C
Sbjct: 129 NVCTSNYYGKRCNRYCIPSPALHWEC 154
>U58738-2|AAQ81271.1| 357|Caenorhabditis elegans Apex-related genes
protein 1, isoforma protein.
Length = 357
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -2
Query: 86 SVHVSHYHGYRCNIYCSYST---WNC 18
+V S+Y+G RCN YC S W C
Sbjct: 129 NVCTSNYYGKRCNRYCIPSPALHWEC 154
>U50143-1|AAB02199.1| 349|Caenorhabditis elegans ARG-1 protein.
Length = 349
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -2
Query: 86 SVHVSHYHGYRCNIYCSYST---WNC 18
+V S+Y+G RCN YC S W C
Sbjct: 129 NVCTSNYYGKRCNRYCIPSPALHWEC 154
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 161 NPPPADIKPP*VMAPLPPGIMPGPKLAKIDEEGLKLTNVNRNNQALMQYAMTNFGTTALS 340
NPPP +KP A + P MP ++ G + T + ++++ L A T+ T LS
Sbjct: 1382 NPPPESVKPVKPAAAVQP--MPQMTAQQVPAHGAQETPILKSSE-LSSSASTSSSITELS 1438
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 26.6 bits (56), Expect = 8.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +2
Query: 161 NPPPADIKPP*VMAPLPPGIMPGPKLAKIDEEGLKLTNVNRNNQALMQYAMTNFGTTALS 340
NPPP +KP A + P MP ++ G + T + ++++ L A T+ T LS
Sbjct: 1402 NPPPESVKPVKPAAAVQP--MPQMTAQQVPAHGAQETPILKSSE-LSSSASTSSSITELS 1458
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,182,925
Number of Sequences: 27780
Number of extensions: 193221
Number of successful extensions: 688
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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