BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_C24 (444 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 32 0.20 At4g27630.2 68417.m03972 expressed protein 31 0.26 At4g27630.1 68417.m03971 expressed protein 31 0.26 At5g26080.1 68418.m03103 proline-rich family protein contains pr... 31 0.46 At1g64990.1 68414.m07366 expressed protein contains similarity t... 30 0.81 At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 1.9 At1g26150.1 68414.m03192 protein kinase family protein similar t... 29 1.9 At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 28 2.5 At4g18890.1 68417.m02785 brassinosteroid signalling positive reg... 28 3.3 At3g20850.1 68416.m02636 proline-rich family protein contains pr... 28 3.3 At2g13270.1 68415.m01462 hypothetical protein 28 3.3 At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 28 3.3 At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 4.3 At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 27 4.3 At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 5.7 At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 27 5.7 At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 5.7 At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 27 5.7 At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 27 5.7 At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 27 5.7 At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp... 27 5.7 At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 27 7.5 At3g32940.1 68416.m04174 expressed protein 27 7.5 At3g24460.1 68416.m03069 TMS membrane family protein / tumour di... 27 7.5 At4g27850.1 68417.m03999 proline-rich family protein contains pr... 26 10.0 >At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19) non-consensus splice site at the intron:exon boundary (AT:exon) Length = 247 Score = 31.9 bits (69), Expect = 0.20 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPPGIMPGP 232 +PPPA + PP V AP P + P P Sbjct: 145 SPPPAPVSPPPVQAPSPISLPPAP 168 >At4g27630.2 68417.m03972 expressed protein Length = 467 Score = 31.5 bits (68), Expect = 0.26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -2 Query: 89 WSVHVSHYHGYRCNIYCSY 33 W HV ++ GY C+IYC Y Sbjct: 289 WKGHVQNFLGYACSIYCVY 307 >At4g27630.1 68417.m03971 expressed protein Length = 348 Score = 31.5 bits (68), Expect = 0.26 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -2 Query: 89 WSVHVSHYHGYRCNIYCSY 33 W HV ++ GY C+IYC Y Sbjct: 170 WKGHVQNFLGYACSIYCVY 188 >At5g26080.1 68418.m03103 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 141 Score = 30.7 bits (66), Expect = 0.46 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPPGIMPGP 232 +PPP I PP + +P PP I P P Sbjct: 74 SPPPPPIYPPPIYSPPPPPIYPPP 97 Score = 29.9 bits (64), Expect = 0.81 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPPGIMPGPKL 238 +PPP I PP + +P P I P PK+ Sbjct: 87 SPPPPPIYPPPIYSPPPTPISPPPKV 112 >At1g64990.1 68414.m07366 expressed protein contains similarity to putative G-protein coupled receptor GI:6649579 from [Homo sapiens] Length = 468 Score = 29.9 bits (64), Expect = 0.81 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -2 Query: 89 WSVHVSHYHGYRCNIYCSY 33 W HV + GY C+IYC Y Sbjct: 290 WKGHVQNLLGYACSIYCVY 308 >At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 428 Score = 28.7 bits (61), Expect = 1.9 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP KPP V P PP + P P Sbjct: 77 PPPYTPKPPTVKPPPPPYVKPPP 99 >At1g26150.1 68414.m03192 protein kinase family protein similar to Pto kinase interactor 1 GI:3668069 from [Lycopersicon esculentum] Length = 760 Score = 28.7 bits (61), Expect = 1.9 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPP-GIMPGPKL 238 NPPP PP + AP PP +P PKL Sbjct: 146 NPPPPPESPPSLPAPDPPSNPLPPPKL 172 >At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to hydroxyproline-rich glycoprotein DZ-HRGP from Volvox carteri f. nagariensis GP|6523547; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 375 Score = 28.3 bits (60), Expect = 2.5 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPPGIMPGP 232 +PPP I PP +A PP + P P Sbjct: 123 SPPPPAITPPPPLATTPPALPPKP 146 >At4g18890.1 68417.m02785 brassinosteroid signalling positive regulator-related contains similarity to BZR1 protein [Arabidopsis thaliana] gi|20270971|gb|AAM18490 Length = 284 Score = 27.9 bits (59), Expect = 3.3 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%) Frame = -2 Query: 371 SYPHISSNPLG----LVPWCRSWSSRTASGLGCF--DSRSSTLNLPHRFSPTWDLA*FPE 210 S+P +NP G L+PW ++ SS + S L F +S S+ + P SPT D P+ Sbjct: 111 SFPS-PTNPFGDANSLIPWLKNLSSNSPSKLPFFHGNSISAPVTPPLARSPTRDQVTIPD 169 Query: 209 A 207 + Sbjct: 170 S 170 >At3g20850.1 68416.m02636 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 134 Score = 27.9 bits (59), Expect = 3.3 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 161 NPPPADIKPP*VMAPLPPGIMPGP 232 +PPPAD+ PP PP +P P Sbjct: 63 SPPPADLPPPPTPYYSPPADLPPP 86 >At2g13270.1 68415.m01462 hypothetical protein Length = 378 Score = 27.9 bits (59), Expect = 3.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 332 PWCRSWSSRTASGLGCFDSRSSTLNL 255 PWCRS S GC ++ SS L++ Sbjct: 135 PWCRSTPSHIYETSGCDEAESSKLDI 160 >At1g49490.1 68414.m05547 leucine-rich repeat family protein / extensin family protein contains similarity to disease resistance protein GI:3894383 from [Lycopersicon esculentum]; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 847 Score = 27.9 bits (59), Expect = 3.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP+ PP V +P PP P P Sbjct: 619 PPPSHSPPPPVYSPPPPTFSPPP 641 >At3g24550.1 68416.m03083 protein kinase family protein contains Pfam domain PF00069: Protein kinase domain Length = 652 Score = 27.5 bits (58), Expect = 4.3 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 155 SDNPPPADIKPP*VMAPLPPGIMPGP 232 S +PPP+ PP + P PPG + P Sbjct: 51 STSPPPSSPLPPSLPPPSPPGSLTPP 76 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 27.5 bits (58), Expect = 4.3 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGPKLAKI 247 PPP PP V +P PP + P A I Sbjct: 721 PPPVHSPPPPVQSPPPPPVFSPPPPAPI 748 Score = 26.2 bits (55), Expect = 10.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP PP V +P PP P P Sbjct: 650 PPPVHSPPPPVFSPPPPMHSPPP 672 >At4g33970.1 68417.m04820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 699 Score = 27.1 bits (57), Expect = 5.7 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP PP V +P PP P P Sbjct: 562 PPPVHSPPPPVFSPPPPVYSPPP 584 >At3g15410.1 68416.m01955 leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Hcr2-5D [Lycopersicon esculentum] gi|3894393|gb|AAC78596; identical to leucine-rich repeat protein [Arabidopsis thaliana] gi|2760084|emb|CAA76000 Length = 584 Score = 27.1 bits (57), Expect = 5.7 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +2 Query: 197 MAPLPPGIMPGPKLAKIDEEGLKLTNVNRNNQA 295 ++ LP ++ KL+K+D EG KLT ++ N+ A Sbjct: 149 ISSLPEDMVNCSKLSKLDVEGNKLTALSENHIA 181 >At2g15880.1 68415.m01820 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 727 Score = 27.1 bits (57), Expect = 5.7 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGPKLAK 244 PPP PP V +P PP P P K Sbjct: 633 PPPVHSPPPPVYSPPPPVYSPPPPPVK 659 Score = 26.6 bits (56), Expect = 7.5 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +2 Query: 152 WSDNPPPADIKPP*VMAPLPPGIMPGP 232 +S PPP PP V +P PP P P Sbjct: 585 YSPPPPPVHSPPPPVHSPPPPVHSPPP 611 Score = 26.2 bits (55), Expect = 10.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP PP V +P PP P P Sbjct: 567 PPPVHSPPPPVHSPPPPVYSPPP 589 Score = 26.2 bits (55), Expect = 10.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP PP V +P PP P P Sbjct: 596 PPPVHSPPPPVHSPPPPVYSPPP 618 Score = 26.2 bits (55), Expect = 10.0 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP PP V +P PP P P Sbjct: 619 PPPVHSPPPPVFSPPPPVHSPPP 641 >At1g70460.1 68414.m08107 protein kinase, putative contains Pfam PF00069: Protein kinase domain Length = 710 Score = 27.1 bits (57), Expect = 5.7 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +2 Query: 167 PPADIKPP*VMAPLPPGIMPGP 232 PPAD PP + LPP + P Sbjct: 41 PPADSSPPPALPSLPPAVFSPP 62 >At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to auxin down regulated GB:X69640 GI:296442 from [Glycine max]; contains Pfam profile PF00234: Protease inhibitor/seed storage/LTP family Length = 297 Score = 27.1 bits (57), Expect = 5.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIMPGP 232 PPP ++PP ++ P PP + P P Sbjct: 94 PPPVVVRPPPIIRP-PPVVYPPP 115 >At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965; Length = 185 Score = 27.1 bits (57), Expect = 5.7 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 Query: 158 DNPPPADIKPP*VMAPLPPGIMPGP 232 ++PPP + PP +P PP P P Sbjct: 150 ESPPPESLPPPSPESPSPPSPEPPP 174 >At1g14640.1 68414.m01740 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein similar to human splicing factor GB:CAA59494 GI:899298 from [Homo sapiens]; contains Pfam profile PF01805: Surp module Length = 735 Score = 27.1 bits (57), Expect = 5.7 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%) Frame = +2 Query: 164 PPPADIKPP*VMAPLPPGIM--PGPKLAKIDEEGL 262 PP A++ PP PP + P PK K+DE L Sbjct: 642 PPMAEMPPPPPPGEAPPPLPEEPEPKRQKLDESAL 676 >At4g13340.1 68417.m02084 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 760 Score = 26.6 bits (56), Expect = 7.5 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = +2 Query: 152 WSDNPPPADIKPP*VMAPLPPGIMPGP 232 +S PPP PP V +P PP + P Sbjct: 495 YSPPPPPPPPPPPPVYSPPPPPVYSSP 521 Score = 26.2 bits (55), Expect = 10.0 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +2 Query: 152 WSDNPPPADIKPP*VMAPLPPGIMPGP 232 +S PPP PP V +P PP P P Sbjct: 449 YSPPPPPPPPPPPPVYSPPPPPPPPPP 475 >At3g32940.1 68416.m04174 expressed protein Length = 607 Score = 26.6 bits (56), Expect = 7.5 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Frame = -2 Query: 365 PHISSNPLGLVPWC--RSWSSRTASG-LGCFDSRSSTLNLPH 249 PHI+S P GLVP + +SR G G +S+ + PH Sbjct: 447 PHIASRPAGLVPAYPPTNTASRPFHGDFGYIPQQSNIITTPH 488 >At3g24460.1 68416.m03069 TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE) Length = 409 Score = 26.6 bits (56), Expect = 7.5 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = -3 Query: 256 FLIDFRQLGTWH-NSRRQRCHNLWRF-NVRRWRIITPAGFLLPFAITFRLGLLVALRTGL 83 F++ LGT +S R R H+ W F + W +T FLLP +I G + G+ Sbjct: 99 FVMFLSTLGTSKTHSSRDRWHSGWWFVKLIMWPALTIIPFLLPSSIIHLYGEIAHFGAGV 158 >At4g27850.1 68417.m03999 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 577 Score = 26.2 bits (55), Expect = 10.0 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = +2 Query: 152 WSDNPPPADIKPP*VMAPLPPGIMPGP 232 WS +PP PP +PLPP P P Sbjct: 157 WSSDPPLPPPPPP-YPSPLPPPPSPSP 182 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,806,676 Number of Sequences: 28952 Number of extensions: 189489 Number of successful extensions: 780 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 577 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 761 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 712739520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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