Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C23
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.37
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 4.5
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 4.5
U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 27 7.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 7.9
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 27 7.9
AF016676-3|AAG24101.2| 494|Caenorhabditis elegans Cytochrome p4... 27 7.9
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 7.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 7.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 7.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 7.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 7.9
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 369 CSWTNFNASGDSKQASKSYIVTGGLDCLVKVWTCENNK 482
C W N++A S+ YI TGG D VK+W ENNK
Sbjct: 325 CGW-NWDAIFSSEGR---YIFTGGNDNQVKIWDVENNK 358
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 414 SKSYIVTGGLDCLVKVWTCENNKLE--FCNSLKGH 512
S + I TGG+D LVK+W + +K++ +L GH
Sbjct: 488 SDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGH 522
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.37
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +3
Query: 333 KKENAHDDPIYSCSWTNFNASGDSKQASKSYIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
K+ H++ Y C + NF+ +G +I++G DC + +W + ++ C L+GH
Sbjct: 292 KQYTGHENSKY-CIFANFSVTGGK------WIISGSEDCKIYIWNLQTREIVQC--LEGH 342
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = +3
Query: 303 TTSTIHSLLFKKENAHDDPIYSCSWTNFNASGDSKQASKSYIVTGGLDCLVKVWTCENNK 482
T +H +L E + GD K S+S++ + G ++VW +N+
Sbjct: 695 TEDQVHFVLAHAEYMRQKAGVKGNSAEIEVEGDKK--SRSWVNSNGRKRAMRVWRLFDNE 752
Query: 483 LEFCNSLKGH 512
E N L GH
Sbjct: 753 SEQVNHLSGH 762
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.9 bits (59), Expect = 4.5
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 423 YIVTGGLDCLVKVWTCENNK 482
YI+T G+D +VK+W N+
Sbjct: 317 YILTSGMDSIVKLWELSTNR 336
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 390 ASGDSKQASKSYIVTGGLDCLVKVW 464
A ++ S Y+VTG +DC V +W
Sbjct: 2274 ARSETSLFSDCYVVTGSMDCTVVLW 2298
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 390 ASGDSKQASKSYIVTGGLDCLVKVW 464
A ++ S Y+VTG +DC V +W
Sbjct: 2274 ARSETSLFSDCYVVTGSMDCTVVLW 2298
>U97193-4|AAB52439.1| 691|Caenorhabditis elegans Hypothetical
protein C06A5.6 protein.
Length = 691
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 288 KESVMTTSTIHSLLFKKENAHDDPIYSC 371
K+ V S +H+L++KK++ D I+ C
Sbjct: 239 KDKVKRKSGVHALIYKKDDRGDKLIFDC 266
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 417 KSYIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
K YI++G D LVK+W +N +L GH
Sbjct: 199 KPYIISGADDHLVKIWDYQNKTC--VQTLDGH 228
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 414 SKSYIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
S +++GG+D ++KVW +++ + +L GH
Sbjct: 176 SSDQVISGGIDNVLKVWDMRRDEITY--TLTGH 206
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 348 HDDPIYSCSWTNFNASGDSKQASKSYIVTGGLDCLVKVWTCEN 476
HD P+ +C W N G++ Q ++TG D ++ W +N
Sbjct: 129 HDGPVKTCHWIN----GNNYQC----LMTGSFDKTLRFWDMKN 163
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 423 YIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
YIV+G D VKVW+ + L ++L+GH
Sbjct: 308 YIVSGSTDRTVKVWSTVDGSL--LHTLQGH 335
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 423 YIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
YIV+G D VKVW+ + L ++L+GH
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSL--LHTLQGH 337
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5651 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 423 YIVTGGLDCLVKVWTCENNKLEFCNSLKGH 512
YIV+G D VKVW+ + L ++L+GH
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSL--LHTLQGH 337
>AF016676-3|AAG24101.2| 494|Caenorhabditis elegans Cytochrome p450
family protein 33C5 protein.
Length = 494
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1
Query: 510 ALLNYYKILAYYFRKSTLSPNSQVLPSLCNS*RLVLNPQK-H*NLSMSNC 364
A + + LA +F + +SP+S+V P+L + + P+ H L+ NC
Sbjct: 445 ARMEIFLFLANFFNRYKISPSSKVFPNLDKKDNVGVFPKDLHAILNRRNC 494
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5011 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5041
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5651 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5651 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5681
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5011 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5041
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 315 IHSLLFKKENAHDDPIYSCSWTNFNASGDSK 407
++ L K HD+ Y C TN N S +K
Sbjct: 5651 VYQLRIKNATVHDEGTYRCVATNENGSATTK 5681
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,758,874
Number of Sequences: 27780
Number of extensions: 201171
Number of successful extensions: 491
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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