Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C22
(378 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 25 1.2
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 25 1.2
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 24 1.6
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 24 1.6
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 3.7
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 4.9
AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic pr... 23 4.9
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 4.9
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 22 6.5
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 6.5
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 22 8.6
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 22 8.6
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 105 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 224
+LP I P L+ + RR A+G D P ++ + SA
Sbjct: 455 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 494
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 24.6 bits (51), Expect = 1.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 105 HLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSA 224
+LP I P L+ + RR A+G D P ++ + SA
Sbjct: 456 YLPASINPVKLRETSTIRRQRRTALGNRDEPHSSSGNWSA 495
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 267 ADVGPGSADVEFRG 308
ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 267 ADVGPGSADVEFRG 308
ADVGPG+ + EF G
Sbjct: 145 ADVGPGAGEREFNG 158
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 334 GADRPLPKPPLNSTSAEP 281
G + PLP PPL S P
Sbjct: 694 GEEAPLPDPPLEDDSDVP 711
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 25 MLRNSSHGGIFTGI*QMRVLNTLEFSCTYLLKL 123
+L+NSSH G +G+ +V T+ L+L
Sbjct: 93 LLKNSSHSGASSGLNTTQVNTTISAGTQNHLRL 125
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1
Query: 199 HEQLKIDQLIGAHHQLELLMIRRL 270
HE+ ID LIGA +E++ +++
Sbjct: 554 HERGSIDMLIGADTFVEMIKAKKI 577
>AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic
protein.
Length = 379
Score = 22.6 bits (46), Expect = 4.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 199 HEQLKIDQLIGAHHQLELL 255
HE+ IDQ HH+ LL
Sbjct: 73 HEESHIDQRFQHHHRFRLL 91
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +3
Query: 135 LKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPH 257
L + R+ T R+ R + A D S+Y + G PH
Sbjct: 486 LAHACRSSTDRQQLCIRCGSEGHKARDCSSYVKCAACGGPH 526
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 22.2 bits (45), Expect = 6.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 142 LFRVAGTISGGKCRKILRYSIPSFVKYQ 59
LFR+ GT++ RKIL + + + Q
Sbjct: 197 LFRINGTLNSEGYRKILSREMLPYARQQ 224
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 166 RTVSVRTDLFRVAGTISGG 110
R V++ D+ +GT+SGG
Sbjct: 724 RVVTIGGDVIETSGTMSGG 742
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 142 LFRVAGTISGGKCRKILR 89
LFR+ GT++ RKILR
Sbjct: 125 LFRIKGTLNLEGYRKILR 142
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 150 RTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGP 281
+TET G GR A+D + P+G+ A GP
Sbjct: 163 QTETPVNGKRGRNLRSTEEADDAKRAKNDAPSGSSLVASAGCGP 206
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 349,423
Number of Sequences: 2352
Number of extensions: 6446
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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