Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C22
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 143 2e-34
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 143 2e-34
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 143 2e-34
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 143 2e-34
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 143 2e-34
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 143 2e-34
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 143 2e-34
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 143 2e-34
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 140 1e-33
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 124 1e-28
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 81 1e-15
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 76 3e-14
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 76 3e-14
Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10 pro... 48 1e-05
BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 0.71
BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1 pr... 32 0.71
AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens ... 31 1.2
BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembr... 31 1.6
BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein. 31 1.6
AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens ... 31 1.6
AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein. 31 1.6
AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein. 31 1.6
AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein. 31 1.6
X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein. 29 5.0
X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for ... 29 5.0
M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipopr... 29 5.0
M17367-1|AAA51741.1| 728|Homo sapiens APOB protein. 29 5.0
M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein. 29 5.0
J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipopr... 29 5.0
AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (inclu... 29 5.0
AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 5.0
AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 5.0
AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like (e... 29 5.0
AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein. 29 5.0
AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein. 29 5.0
AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein. 29 5.0
AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein. 29 5.0
X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein p... 28 8.8
M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein. 28 8.8
BC071960-1|AAH71960.1| 232|Homo sapiens CCDC71 protein protein. 28 8.8
BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain cont... 28 8.8
AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein. 28 8.8
AK023691-1|BAB14642.1| 198|Homo sapiens protein ( Homo sapiens ... 28 8.8
AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens ... 28 8.8
AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein. 28 8.8
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 143 bits (346), Expect = 2e-34
Identities = 78/115 (67%), Positives = 85/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 163
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 140 bits (340), Expect = 1e-33
Identities = 77/115 (66%), Positives = 84/115 (73%), Gaps = 6/115 (5%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPA L+RS R ET R +G
Sbjct: 61 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAILRRS-RPETGRPRPKGLE 119
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
G RP R DR YRR A P GA DKKA+ G GSA + +FRGGFGRGR P
Sbjct: 120 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSATEFQFRGGFGRGRGQP 172
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 124 bits (298), Expect = 1e-28
Identities = 70/104 (67%), Positives = 76/104 (73%), Gaps = 5/104 (4%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR---RGAV 179
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHLPPEIVPATL+RS R ET R +G
Sbjct: 52 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRS-RPETGRPRPKGLE 110
Query: 180 G-RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSADVEFR 305
G RP R DR YRR A P GA DKKA+ G GSA EF+
Sbjct: 111 GERPARLTRGEADRDTYRRSAVPPGA--DKKAEAGAGSA-TEFQ 151
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 81.0 bits (191), Expect = 1e-15
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGAVGRP 188
L++RG V+E FAW HFYWYLTNEGI +LR +LHLPPEIVPA+L+R R + A P
Sbjct: 55 LRARGLVRETFAWCHFYWYLTNEGIAHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRTP 114
Query: 189 DAPARTAEDRSAYRRAP 239
A S +R P
Sbjct: 115 HVQAVQGPLGSPPKRGP 131
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGAVGRP 188
L++RG V+E FAW HF+WYLTNEGI +LR +LHLPPEIV A+L+R R + A P
Sbjct: 55 LRARGLVRETFAWCHFFWYLTNEGIAHLRQYLHLPPEIVAASLQRVRRPVAMVMPARRTP 114
Query: 189 DAPARTAEDRSAYRRAP 239
A S +R P
Sbjct: 115 HVQAVQGPLGSPPKRGP 131
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 76.2 bits (179), Expect = 3e-14
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +3
Query: 9 LKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHL 110
LKSRGYVKEQFAWRHFYWYLTNEGI+YLR +LHL
Sbjct: 45 LKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHL 78
>Z70761-1|CAA94807.1| 58|Homo sapiens ribosomal protein S10
protein.
Length = 58
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +3
Query: 183 RPDAPARTAEDRSAYRR-APPAGAPHDKKADVGPGSA-DVEFRGGFGRGRSAP 335
RP R DR YRR A P GA DKKA+ G G + +FRGGFGRGR P
Sbjct: 7 RPARLTRGEADRDTYRRSAVPPGA--DKKAEAGLGQQPEFQFRGGFGRGRGQP 57
>BC030553-1|AAH30553.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 186 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 335
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>BC014439-1|AAH14439.1| 470|Homo sapiens sphingosine kinase 1
protein.
Length = 470
Score = 31.9 bits (69), Expect = 0.71
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 186 PDAPARTAEDRSAYRRAPPAGA--PHDKKADVGPGSADVEFRGGFGRGRSAP 335
P PA D A P G PH + D GS D E + G SAP
Sbjct: 20 PRGPAAAGNDAGAPTATAPGGEGEPHSRPCDARLGSTDKELKAGAAATGSAP 71
>AK000857-1|BAA91400.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ20850 fis, clone ADKA01542. ).
Length = 180
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 171 GAVGRPDAPARTAEDRSAYR-RAPPAGAPHDKKADVGPGSADVEFRGGFGRGR 326
G G R ++ +A R RA PAGA D GP + D + R G GR
Sbjct: 117 GGAGGGSRAGRASQAAAARRPRAQPAGAGADAAGHGGPAAVDGDARAGGAGGR 169
>BC089447-1|AAH89447.1| 981|Homo sapiens proline-rich transmembrane
protein 3 protein.
Length = 981
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 251
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>BC040508-1|AAH40508.1| 597|Homo sapiens PRRT3 protein protein.
Length = 597
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 251
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 23 PPVKAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 69
>AK090993-1|BAC03564.1| 667|Homo sapiens protein ( Homo sapiens
cDNA FLJ33674 fis, clone BRAWH2002047. ).
Length = 667
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 111 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAED-RSAYRRAPPAGA 251
PP P+T +R + T +R A+G+P P TA SA +PPA A
Sbjct: 407 PPVQAPSTSRRGLIRVTTQR-ALGQPPPPEPTASSMASAPASSPPANA 453
>AF363689-1|AAK73515.1| 1608|Homo sapiens capicua protein protein.
Length = 1608
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 334 GADRPLPKPPLNSTSAEPGPT 272
GA+ PLP PP T+A P PT
Sbjct: 1530 GAEAPLPVPPPTGTAAAPAPT 1550
>AC006486-3|AAD11988.1| 1453|Homo sapiens BC85722_1 protein.
Length = 1453
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 334 GADRPLPKPPLNSTSAEPGPT 272
GA+ PLP PP T+A P PT
Sbjct: 1375 GAEAPLPVPPPTGTAAAPAPT 1395
>AB002304-1|BAA20765.1| 1451|Homo sapiens KIAA0306 protein.
Length = 1451
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 334 GADRPLPKPPLNSTSAEPGPT 272
GA+ PLP PP T+A P PT
Sbjct: 1373 GAEAPLPVPPPTGTAAAPAPT 1393
>X04714-1|CAA28420.1| 4560|Homo sapiens apo-B100 precursor protein.
Length = 4560
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1830 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1867
>X04506-1|CAA28191.1| 4563|Homo sapiens protein ( Human mRNA for
apolipoprotein B-100. ).
Length = 4563
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>M19828-1|AAB00481.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 (apoB) gene, exons 22 through 29. ).
Length = 4563
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>M17367-1|AAA51741.1| 728|Homo sapiens APOB protein.
Length = 728
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 163 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 200
>M15421-1|AAA51758.1| 3262|Homo sapiens APOB protein.
Length = 3262
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 552 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 589
>J02610-1|AAA35549.1| 4563|Homo sapiens protein ( Human apolipoprotein
B-100 mRNA, complete cds. ).
Length = 4563
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AY324608-1|AAP72970.1| 4563|Homo sapiens apolipoprotein B (including
Ag(x) antigen) protein.
Length = 4563
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AL356913-3|CAI22673.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 281
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 282 GSADV 296
G DV
Sbjct: 278 GVGDV 282
>AL354978-7|CAH71847.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 281
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 282 GSADV 296
G DV
Sbjct: 278 GVGDV 282
>AL139147-4|CAI21944.1| 631|Homo sapiens SH3-domain GRB2-like
(endophilin) interacting protein 1 protein.
Length = 631
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +3
Query: 108 LPPEIVPATLKRSVRTETVRRGAVGRPDAPAR-TAEDRSAYRRAPPAGAPHDKKADVG-P 281
LPP+ VPAT R+ T+ GA P PA RS PP P K G P
Sbjct: 219 LPPKNVPATPPRTGSPLTIGPGA-SSPARPATPLVPCRSTTPPPPPPRPPSRPKLPPGKP 277
Query: 282 GSADV 296
G DV
Sbjct: 278 GVGDV 282
>AF317634-1|AAL26903.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 322 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 185
P+P PP + + P TSA LS ++A A ASG
Sbjct: 393 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 438
>AC010872-1|AAX88848.1| 3929|Homo sapiens unknown protein.
Length = 3929
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHRLNT 1870
>AB085847-1|BAC24801.1| 616|Homo sapiens HRD1 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 322 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 185
P+P PP + + P TSA LS ++A A ASG
Sbjct: 393 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 438
>AB058713-1|BAB47439.1| 579|Homo sapiens KIAA1810 protein protein.
Length = 579
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -3
Query: 322 PLPKPPLNSTSAEPGPTSAFLSXXXXXXXXXXXADLSSAVRAGASG 185
P+P PP + + P TSA LS ++A A ASG
Sbjct: 356 PVPPPPSSGEAVAPPSTSAALSRPSGAATTTAAGTSATAASATASG 401
>X53587-1|CAA37656.1| 1822|Homo sapiens integrin beta 4 protein
protein.
Length = 1822
Score = 28.3 bits (60), Expect = 8.8
Identities = 21/81 (25%), Positives = 29/81 (35%)
Frame = +3
Query: 66 LTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPA 245
L E ++ R+ LPPE++P S R+ P AP TA P +
Sbjct: 1378 LLGEELDLRRVTWRLPPELIPRLSASSGRSSDAE-----APTAPRTTAARAGRAAAVPRS 1432
Query: 246 GAPHDKKADVGPGSADVEFRG 308
P + G D F G
Sbjct: 1433 ATPGPPGEHLVNGRMDFAFPG 1453
>M14162-1|AAB04636.1| 4563|Homo sapiens APOB protein.
Length = 4563
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -1
Query: 174 HHDVLSLYALTSSGLLVQFQEVSAGKF*GIQYPHLLNT 61
++++ +YA++S+ L ++ + K G+++ H LNT
Sbjct: 1833 NNEIKHIYAISSAALSASYKADTVAKVQGVEFSHGLNT 1870
>BC071960-1|AAH71960.1| 232|Homo sapiens CCDC71 protein protein.
Length = 232
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 138 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAG----APHDKKADVGPGSAD-VEF 302
K S + T R+G RP+ + + + PP P KA +GPG+A ++F
Sbjct: 132 KGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKF 191
Query: 303 R 305
R
Sbjct: 192 R 192
>BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain
containing 71 protein.
Length = 467
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 138 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAG----APHDKKADVGPGSAD-VEF 302
K S + T R+G RP+ + + + PP P KA +GPG+A ++F
Sbjct: 367 KGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKF 426
Query: 303 R 305
R
Sbjct: 427 R 427
>AY296059-1|AAQ62697.1| 1494|Homo sapiens BCL9-2 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 219 SAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRGRSAP 335
SA PP G P D D+ P S GG G G + P
Sbjct: 311 SAPPALPPEGPPEDSSQDLAPNSVGAASTGG-GTGGTHP 348
>AK023691-1|BAB14642.1| 198|Homo sapiens protein ( Homo sapiens
cDNA FLJ13629 fis, clone PLACE1011056, weakly similar to
HISTONE H1, GONADAL. ).
Length = 198
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 138 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAG----APHDKKADVGPGSAD-VEF 302
K S + T R+G RP+ + + + PP P KA +GPG+A ++F
Sbjct: 98 KGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKF 157
Query: 303 R 305
R
Sbjct: 158 R 158
>AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to
HISTONE H1, GONADAL. ).
Length = 467
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 138 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAG----APHDKKADVGPGSAD-VEF 302
K S + T R+G RP+ + + + PP P KA +GPG+A ++F
Sbjct: 367 KGSAKARTTRKGQKNRPETVGQKRKRAEEAKDLPPKKRTRLGPRSPKAWLGPGTAKLLKF 426
Query: 303 R 305
R
Sbjct: 427 R 427
>AB094091-1|BAC76045.1| 1499|Homo sapiens DLNB11 protein.
Length = 1499
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 219 SAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRGRSAP 335
SA PP G P D D+ P S GG G G + P
Sbjct: 316 SAPPALPPEGPPEDSSQDLAPNSVGAASTGG-GTGGTHP 353
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,226,529
Number of Sequences: 237096
Number of extensions: 944914
Number of successful extensions: 3701
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 3447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3677
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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