Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C21
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.4  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.4  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   8.4  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   8.4  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 184 LYIQILYAILTVL 146
           LY+Q +Y +LT L
Sbjct: 75  LYVQNIYTVLTAL 87


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 193 ISHLYIQILYAILTVLYHIFLMSLV 119
           +S +Y+ ILY + ++LY +  + +V
Sbjct: 266 VSVVYVLILYILESLLYMVTKLVVV 290


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 184 LYIQILYAILTVL 146
           LY+Q +Y +LT L
Sbjct: 75  LYVQNIYTVLTAL 87


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 203 GWQEFTTETRSTRKIVQTLYPLLILTETLYLTPVKKLKEE 322
           GW  FT +       V  L+ LLI++  +    V+K + +
Sbjct: 142 GWLAFTKQLLIKFVEVYPLFVLLIVSNVVLKILVEKYRHQ 181


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 110 NLNHQRHQENM 142
           N++ Q HQ+NM
Sbjct: 312 NMHQQHHQQNM 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.133    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,020
Number of Sequences: 336
Number of extensions: 1658
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)