Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C19
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   0.78 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   1.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   4.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   9.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   9.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 317  LRGSTAIPIVLAKEGFNPEALISRRVNP 234
            LRG TA  I++  E   PE  + R + P
Sbjct: 1153 LRGRTAQLIIVQAENAYPEVELDRELRP 1180


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 132 YSILLSTMTTSWLIKPCLH 76
           YSILLS + T  +  P +H
Sbjct: 3   YSILLSLLITCLICSPSVH 21


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 2   HEVLKWVKGII*YQMAISIRIGK 70
           HE+ +WVK +  Y +   +R+ +
Sbjct: 326 HEMSEWVKVVFLYWLPCILRMSR 348


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 298 IAVDPRRRNKSVESLPI 348
           +   PR  +K VE +P+
Sbjct: 604 VCSSPRSEDKEVEDMPV 620


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 327 FVASTWVYSNTNC 289
           F  ST +Y N NC
Sbjct: 633 FNISTTIYENQNC 645


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 226 HELLYDNAQ*GNEQRVLEGQPQDEEQQ 146
           H      AQ   +Q+  + QPQ ++QQ
Sbjct: 821 HPQAQAQAQPQQQQQQQQQQPQQQQQQ 847


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,200
Number of Sequences: 438
Number of extensions: 1848
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)