Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C18
(416 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 108 5e-23
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 91 6e-18
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 90 2e-17
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 79 5e-14
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 71 7e-12
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 70 2e-11
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 68 7e-11
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 64 1e-09
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 64 1e-09
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 63 2e-09
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 61 1e-08
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 57 1e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 56 4e-07
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 48 8e-05
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 47 1e-04
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 47 2e-04
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 46 2e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 44 0.002
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 42 0.004
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 39 0.036
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 38 0.063
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.063
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 36 0.34
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 36 0.34
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 0.44
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 36 0.44
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 0.59
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.59
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 2.4
UniRef50_Q9FM44 Cluster: Similarity to unknown protein; n=5; cor... 32 5.5
UniRef50_Q0Q476 Cluster: Replicase polyprotein 1ab (pp1ab) (ORF1... 32 5.5
UniRef50_Q75JE5 Cluster: Similar to Plasmodium falciparum (Isola... 31 7.2
UniRef50_A7RZ85 Cluster: Predicted protein; n=1; Nematostella ve... 31 7.2
UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1; Metha... 31 7.2
UniRef50_Q8ES66 Cluster: Hypothetical conserved protein; n=2; Ba... 31 9.6
UniRef50_A7BKQ8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.6
UniRef50_Q0DZX1 Cluster: Os02g0593900 protein; n=3; Oryza sativa... 31 9.6
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 108 bits (259), Expect = 5e-23
Identities = 53/72 (73%), Positives = 55/72 (76%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2 GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61
Query: 188 IHSQVRGISIKL 223
HSQVRGISIKL
Sbjct: 62 RHSQVRGISIKL 73
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/52 (76%), Positives = 43/52 (82%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
DNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T GRRN
Sbjct: 82 DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 91.5 bits (217), Expect = 6e-18
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 2e-11
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 89.8 bits (213), Expect = 2e-17
Identities = 41/72 (56%), Positives = 52/72 (72%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YY+R+TLDF TNK++ EE++I+P+K LRNK+AGFTTHLMRR+
Sbjct: 2 GRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRI 61
Query: 188 IHSQVRGISIKL 223
VRGIS+KL
Sbjct: 62 QRGPVRGISLKL 73
Score = 35.9 bits (79), Expect = 0.34
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 252 NYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGY 389
++VPE SALE + I VD +T +ML L +++ G++ Q + Y
Sbjct: 83 DFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 78.6 bits (185), Expect = 5e-14
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKL 223
YYTRL DF TNK +CEEIAIIP++ LRNKI + THLM+R+ VRGISIKL
Sbjct: 75 YYTRLGNDFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKL 128
Score = 54.0 bits (124), Expect = 1e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPE SAL+Q+IIEVD DTK ML + F ++ Q TQP
Sbjct: 137 DNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 71.3 bits (167), Expect = 7e-12
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G++RT YY++L DF NKR+ ++ I +K L+NKIAG+TTH+M+RL
Sbjct: 2 GKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRL 61
Query: 188 IHSQVRGISIKL 223
VRGIS+KL
Sbjct: 62 ARGPVRGISLKL 73
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKL 223
Y+TRL DF T+K +CEEI I+P+K L++KIAG+ THL +++ VRGISIKL
Sbjct: 57 YHTRLGNDFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKL 110
Score = 57.2 bits (132), Expect = 1e-07
Identities = 24/40 (60%), Positives = 34/40 (85%)
Frame = +3
Query: 252 NYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+Y+PEVSAL+Q+I EVD TK+MLK+LD +++ LQ+TQP
Sbjct: 118 DYIPEVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 68.1 bits (159), Expect = 7e-11
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKL 223
YY +LT DF NK+I E+ +P+K LRNKIAGF THL++R+ V+GIS+K+
Sbjct: 60 YYMKLTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKI 113
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 64.1 bits (149), Expect = 1e-09
Identities = 27/41 (65%), Positives = 37/41 (90%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+ YVPEVSAL+Q+IIEVD DT++MLK+LDF +++ LQ+TQP
Sbjct: 124 ETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
+Y RL F TNKR+CE+IAI P+K LRN IAG+ HL +R+
Sbjct: 69 HYPRLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRI 110
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKL 223
Y TRL DF TNK +CE IAII +K LRNKI G+ HLM+R+ VRGISIKL
Sbjct: 21 YCTRLGNDFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKL 73
Score = 62.1 bits (144), Expect = 4e-09
Identities = 24/44 (54%), Positives = 37/44 (84%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQ 380
DNYVPE+S L+Q+ +EVD DTK+ML++LDF +++ LQ+T+P +
Sbjct: 82 DNYVPEISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 63.3 bits (147), Expect = 2e-09
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLARR 232
YYT L +F +NKR CEE II +K L NKI G+ HLM+R+ VRGISIKL +
Sbjct: 74 YYTPLGKNFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEK 130
Score = 59.7 bits (138), Expect = 2e-08
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPE+SA +Q+ IEVD DTK+M K+L+F +++ LQ+TQP
Sbjct: 136 DNYVPEISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 60.9 bits (141), Expect = 1e-08
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G+VRT Y+ LT+DF NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 2 GKVRTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEF 61
Query: 188 IHSQVRGI 211
+ + I
Sbjct: 62 FKGKKKKI 69
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 57.2 bits (132), Expect = 1e-07
Identities = 28/60 (46%), Positives = 35/60 (58%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GR+R Y T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L
Sbjct: 2 GRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQL 61
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 55.6 bits (128), Expect = 4e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +3
Query: 264 EVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
+VSAL+Q++IEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 48.0 bits (109), Expect = 8e-05
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 181
G+VR Y LT DF+ NK++ E +A TK LRN IAG+ THLMR
Sbjct: 2 GKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMR 59
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
G +RT + + T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 2 GNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
G VR+ Y T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 2 GNVRSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 46.4 bits (105), Expect = 2e-04
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GR+ T YY L DF +K +C+EI I ++ L +KIAG+ THLM+ +
Sbjct: 2 GRICTKILKKVAWVITEKYYIYLGNDFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEI 61
Query: 188 --IHSQVRGISIKLARR 232
SQV S + RR
Sbjct: 62 RGSDSQVSPSSCRRRRR 78
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3
Query: 252 NYVPEVSALEQDIIEVDSDTKDMLKMLDFSNIN 350
NYVPE S L+Q+I EVD+ TK+MLK+ F +++
Sbjct: 82 NYVPEGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/53 (32%), Positives = 33/53 (62%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIK 220
Y+ RL FD N + +++A++ +K L+N+IAG+ T L ++++ + IK
Sbjct: 20 YFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIK 72
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 42.3 bits (95), Expect = 0.004
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMR 181
G+VR Y T DF+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 2 GKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 39.1 bits (87), Expect = 0.036
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
G+VR Y T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 2 GKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 38.3 bits (85), Expect = 0.063
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 65 YTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
YT L+ D K +C+EI I P+K L KIAGF LM+++
Sbjct: 38 YTGLSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQI 77
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 38.3 bits (85), Expect = 0.063
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQ 199
DF NK+I E++I+ +K L+N+IAG+ T+ +++ I +
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREE 60
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 35.9 bits (79), Expect = 0.34
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHS 196
DF+ NK + EE+ I +K +RN+IAG+ T M + +
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGYVTRKMNNPVEA 63
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.9 bits (79), Expect = 0.34
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 25 TGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.5 bits (78), Expect = 0.44
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTHLM 178
DF NK E++A + TK +RN+IAG+ T M
Sbjct: 27 DFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 35.5 bits (78), Expect = 0.44
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
T DF+TNK + + I +K +RN++AG+ T + R+
Sbjct: 25 TKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARM 61
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.1 bits (77), Expect = 0.59
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 77 TLDFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 24 TDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.59
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTT 169
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 83 DFDTNKRICEEIAIIPTKPLRNKIAGFTTH 172
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_Q9FM44 Cluster: Similarity to unknown protein; n=5; core
eudicotyledons|Rep: Similarity to unknown protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 310
Score = 31.9 bits (69), Expect = 5.5
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 370 GCVSCRPLMLLKSSIFNISLVSESTSMISCSRADTS 263
GC R +K+ +F+ LVS++ S+I+C ++TS
Sbjct: 142 GCGDARIAKSVKNKVFSFDLVSKNPSVIACDMSNTS 177
>UniRef50_Q0Q476 Cluster: Replicase polyprotein 1ab (pp1ab) (ORF1ab
polyprotein) [Includes: Replicase polyprotein 1a (pp1a)
(ORF1A)] [Contains: Non-structural protein 1 (nsp1)
(Leader protein); Non-structural protein 2 (nsp2) (p65
homolog); Non-structural protein 3 (EC 3.4.22.-) (nsp3)
(Papain- like proteinase) (PL-PRO) (PL2-PRO);
Non-structural protein 4 (nsp4); 3C-like proteinase (EC
3.4.22.-) (3CL-PRO) (3CLp) (nsp5); Non- structural
protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-
structural protein 8 (nsp8); Non-structural protein 9
(nsp9); Non- structural protein 10 (nsp10) (Growth
factor-like peptide) (GFL); RNA- directed RNA polymerase
(EC 2.7.7.48) (RdRp) (Pol) (nsp12); Helicase (Hel)
(nsp13); Exoribonuclease (EC 3.1.13.-) (ExoN) (nsp14);
Uridylate-specific endoribonuclease (EC 3.1.-.-) (NendoU)
(nsp15); Putative 2'-O-methyl transferase (EC 2.1.1.-)
(nsp16)]; n=183; Coronavirus|Rep: Replicase polyprotein
1ab (pp1ab) (ORF1ab polyprotein) [Includes: Replicase
polyprotein 1a (pp1a) (ORF1A)] [Contains: Non-structural
protein 1 (nsp1) (Leader protein); Non-structural protein
2 (nsp2) (p65 homolog); Non-structural protein 3 (EC
3.4.22.-) (nsp3) (Papain- like proteinase) (PL-PRO)
(PL2-PRO); Non-structural protein 4 (nsp4); 3C-like
proteinase (EC 3.4.22.-) (3CL-PRO) (3CLp) (nsp5); Non-
structural protein 6 (nsp6); Non-structural protein 7
(nsp7); Non- structural protein 8 (nsp8); Non-structural
protein 9 (nsp9); Non- structural protein 10 (nsp10)
(Growth factor-like peptide) (GFL); RNA- directed RNA
polymerase (EC 2.7.7.48) (RdRp) (Pol) (nsp12); Helicase
(Hel) (nsp13); Exoribonuclease (EC 3.1.13.-) (ExoN)
(nsp14); Uridylate-specific endoribonuclease (EC 3.1.-.-)
(NendoU) (nsp15); Putative 2'-O-methyl transferase (EC
2.1.1.-) (nsp16)] - Bat coronavirus 279/2005 (BtCoV)
(BtCoV/279/2005)
Length = 7079
Score = 31.9 bits (69), Expect = 5.5
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 267 VSALEQDIIEVDSDTKDMLKMLDFSNINGLQLT 365
VSA Q +++ D DTKD+++ L S+ + L++T
Sbjct: 2617 VSAARQGVVDTDVDTKDVIECLKLSHHSDLEVT 2649
>UniRef50_Q75JE5 Cluster: Similar to Plasmodium falciparum (Isolate
3D7). Asparagine-rich protein, putative; n=2;
Dictyostelium discoideum|Rep: Similar to Plasmodium
falciparum (Isolate 3D7). Asparagine-rich protein,
putative - Dictyostelium discoideum (Slime mold)
Length = 1048
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 220 LNRDSSHLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSKP-SVVFFDYNL 44
+N HL + ++ Q SN + + ++D NF FI E+K + +++ DY++
Sbjct: 458 INIKDGHLNIVNSTFQSNIHWSNNLIRIKEKSDINFTNTLFINNEIKKENFNLISIDYSI 517
Query: 43 RRF 35
RF
Sbjct: 518 LRF 520
>UniRef50_A7RZ85 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 2210
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -2
Query: 226 CKLNRDSSHLGVYETSHQMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSK 74
C L+ D+S + + SH + S + +++ ++SN + +P GI + K
Sbjct: 2014 CPLHPDASRVNYEKDSHNNSAKKSGLLTVKVNIDNSNCMHFPISGISTQDK 2064
>UniRef50_A0B7E2 Cluster: Ribosomal protein S17E-like; n=1;
Methanosaeta thermophila PT|Rep: Ribosomal protein
S17E-like - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 86
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 62 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRR 184
Y T DF+ NK + K +RN+IAG+ T ++ +
Sbjct: 34 YEGEFTTDFEMNKEKVSAYTNVRNKAIRNRIAGYITRILEQ 74
>UniRef50_Q8ES66 Cluster: Hypothetical conserved protein; n=2;
Bacillaceae|Rep: Hypothetical conserved protein -
Oceanobacillus iheyensis
Length = 577
Score = 31.1 bits (67), Expect = 9.6
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 190 YETSHQMGGEPSNFVAKRLSRNDSNFLTYPFIGIEVKSKPSVVFFDYNLRRFF 32
Y+T+ + + +RLSRN+ N LT F +E S S + +D N R+ F
Sbjct: 30 YQTNVALKNQAIEEATERLSRNEQNLLTV-FSTVEAMS--SYMIYDRNFRKIF 79
>UniRef50_A7BKQ8 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 600
Score = 31.1 bits (67), Expect = 9.6
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 54 SKNTTLGLLLTSIPIKGYVRKLLSFLLSL 140
+K T LG+ LT+ PIKG++ K L++ S+
Sbjct: 535 NKETDLGITLTAEPIKGFLEKPLTYTTSV 563
>UniRef50_Q0DZX1 Cluster: Os02g0593900 protein; n=3; Oryza
sativa|Rep: Os02g0593900 protein - Oryza sativa subsp.
japonica (Rice)
Length = 292
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 370 GCVSCRPLMLLKSSIFNISLVSESTSMISCSRADT 266
GC + +K+ +F+I LVSE S+I+C A T
Sbjct: 148 GCGNAAVSKNVKNKVFSIDLVSEDPSVIACDMAHT 182
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,168,476
Number of Sequences: 1657284
Number of extensions: 6356709
Number of successful extensions: 15417
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 15154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15415
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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