Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C18
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   110   2e-26
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   2.5  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     22   7.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  110 bits (264), Expect = 2e-26
 Identities = 53/72 (73%), Positives = 56/72 (77%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF THLM+RL
Sbjct: 2   GRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRL 61

Query: 188 IHSQVRGISIKL 223
            HSQVRGISIKL
Sbjct: 62  RHSQVRGISIKL 73



 Score = 71.3 bits (167), Expect = 1e-14
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = +3

Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
           DNYVP+VSALEQDIIEVD +TK+MLK LDF+NI  +QLT P T  GY  RRN
Sbjct: 82  DNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP-TAPGYSNRRN 131


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 229 KRSVKGVTIMSQKYLL*NRISLKSI 303
           K  +K VT+M  K  + N ISLK++
Sbjct: 214 KMKMKSVTVMFPKMHISNSISLKNV 238


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 49  NLRRFFYGLSPN 14
           N ++FFY L+PN
Sbjct: 129 NFKKFFYTLNPN 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,300
Number of Sequences: 2352
Number of extensions: 6947
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)