Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C18
(416 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 93 4e-19
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 93 4e-19
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 93 4e-19
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 93 4e-19
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 73 5e-13
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 50/72 (69%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
GRVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 2 GRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 69.7 bits (163), Expect = 4e-12
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 82 DNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 72.5 bits (170), Expect = 5e-13
Identities = 36/72 (50%), Positives = 43/72 (59%)
Frame = +2
Query: 8 GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
G V T YY L DF TNK +C+EIAIIP+K L NK AG+ THLM+++
Sbjct: 2 GHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQI 61
Query: 188 IHSQVRGISIKL 223
VRGISIKL
Sbjct: 62 QRGPVRGISIKL 73
Score = 68.9 bits (161), Expect = 6e-12
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +3
Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 371
DNYVPE+SAL+Q+IIEVD DTK+MLK+LDF ++ LQ+TQP
Sbjct: 82 DNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,346,208
Number of Sequences: 237096
Number of extensions: 971699
Number of successful extensions: 1970
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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