Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C18
         (416 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   108   3e-24
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   108   3e-24
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   108   3e-24
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   108   3e-24
L11451-1|AAA28918.1|  786|Drosophila melanogaster serine protein...    27   7.6  
AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p pro...    27   7.6  
AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA...    27   7.6  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  108 bits (259), Expect = 3e-24
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKL 223
            HSQVRGISIKL
Sbjct: 62  RHSQVRGISIKL 73



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
           DNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  108 bits (259), Expect = 3e-24
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKL 223
            HSQVRGISIKL
Sbjct: 62  RHSQVRGISIKL 73



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
           DNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  108 bits (259), Expect = 3e-24
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKL 223
            HSQVRGISIKL
Sbjct: 62  RHSQVRGISIKL 73



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
           DNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  108 bits (259), Expect = 3e-24
 Identities = 53/72 (73%), Positives = 55/72 (76%)
 Frame = +2

Query: 8   GRVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRL 187
           GRVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL
Sbjct: 2   GRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRL 61

Query: 188 IHSQVRGISIKL 223
            HSQVRGISIKL
Sbjct: 62  RHSQVRGISIKL 73



 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 40/52 (76%), Positives = 43/52 (82%)
 Frame = +3

Query: 249 DNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQGGYGGRRN 404
           DNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP T     GRRN
Sbjct: 82  DNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131


>L11451-1|AAA28918.1|  786|Drosophila melanogaster serine proteinase
           protein.
          Length = 786

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 327 SSTYPWCPNRLQ*YPVLEQILLGHNCHAFHAPLLASLIE--IPRTWECMR 184
           SS +   P+RL+ YP L+Q+  G N      P     +E      WEC++
Sbjct: 106 SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 155


>AY119618-1|AAM50272.1|  683|Drosophila melanogaster LD44584p
           protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 327 SSTYPWCPNRLQ*YPVLEQILLGHNCHAFHAPLLASLIE--IPRTWECMR 184
           SS +   P+RL+ YP L+Q+  G N      P     +E      WEC++
Sbjct: 2   SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 51


>AE014297-2154|AAF55277.1|  787|Drosophila melanogaster CG4316-PA
           protein.
          Length = 787

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -3

Query: 327 SSTYPWCPNRLQ*YPVLEQILLGHNCHAFHAPLLASLIE--IPRTWECMR 184
           SS +   P+RL+ YP L+Q+  G N      P     +E      WEC++
Sbjct: 106 SSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIK 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,341,740
Number of Sequences: 53049
Number of extensions: 295300
Number of successful extensions: 725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)