Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C15
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    34   0.001
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   1.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   1.8  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   2.4  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   7.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 34.3 bits (75), Expect = 0.001
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 214 EVTVSGVEVPNPIEHFEEANFPDYVCQAIKSMGYKDPTPIQ 336
           +V VSG   P+ +E FE +   + V   ++   Y  PTPIQ
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQ 201


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 265 EANFPDYVCQAIKSMGYK 318
           +AN  DY C +  S+G+K
Sbjct: 280 DANASDYFCSSTSSVGFK 297


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 265 EANFPDYVCQAIKSMGYK 318
           +AN  DY C +  S+G+K
Sbjct: 280 DANASDYFCSSTSSVGFK 297


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +1

Query: 133 FNKDFYNPHKSVLDRSPYEVEDYRNKHEVTVSGVEVPNPIEH 258
           ++ D +    +V+ R P  V+  +  H+V    V V  P+ H
Sbjct: 128 YHADHHTGFNAVVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 162 FMRIIKIFVKWLERQRI 112
           FMR++K  V++ ER++I
Sbjct: 248 FMRVVKDTVEYREREQI 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.134    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,975
Number of Sequences: 2352
Number of extensions: 5104
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)