Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C14
(181 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 1.5
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 19 3.5
AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory recept... 19 3.5
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 19 4.6
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 19 4.6
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 19 4.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 19 6.1
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 19 6.1
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 18 8.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 18 8.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 18 8.1
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 18 8.1
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 20.6 bits (41), Expect = 1.5
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -3
Query: 179 IYHPHCLHCQ-ICYLHQI--WNRRFHGYYSNH 93
+Y PH H + LH N H Y++NH
Sbjct: 25 LYEPHVAHRPGLQGLHHSPHLNHAMHPYHANH 56
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 19.4 bits (38), Expect = 3.5
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 152 QICYLHQ 132
+ICYLHQ
Sbjct: 225 KICYLHQ 231
>AM292324-1|CAL23136.1| 398|Tribolium castaneum gustatory receptor
candidate 3 protein.
Length = 398
Score = 19.4 bits (38), Expect = 3.5
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 152 QICYLHQ 132
+ICYLHQ
Sbjct: 243 KICYLHQ 249
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 19.0 bits (37), Expect = 4.6
Identities = 7/28 (25%), Positives = 12/28 (42%)
Frame = -3
Query: 164 CLHCQICYLHQIWNRRFHGYYSNHQTFS 81
C +C I + + GY+ H F+
Sbjct: 473 CQYCNIAFGDAVLYTIHMGYHGFHNPFT 500
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 19.0 bits (37), Expect = 4.6
Identities = 4/8 (50%), Positives = 8/8 (100%)
Frame = -3
Query: 143 YLHQIWNR 120
++H+IWN+
Sbjct: 351 FVHEIWNK 358
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 19.0 bits (37), Expect = 4.6
Identities = 4/8 (50%), Positives = 8/8 (100%)
Frame = -3
Query: 143 YLHQIWNR 120
++H+IWN+
Sbjct: 307 FVHEIWNK 314
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 18.6 bits (36), Expect = 6.1
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -3
Query: 128 WNRRFHG 108
W R FHG
Sbjct: 598 WRRNFHG 604
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 18.6 bits (36), Expect = 6.1
Identities = 5/7 (71%), Positives = 5/7 (71%)
Frame = -3
Query: 128 WNRRFHG 108
W R FHG
Sbjct: 490 WRRNFHG 496
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 18.2 bits (35), Expect = 8.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 137 HQIWNRRFHGYYSNHQTFS 81
H I ++ Y NHQ ++
Sbjct: 53 HHIQQQQLQYGYHNHQNYN 71
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 18.2 bits (35), Expect = 8.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 137 HQIWNRRFHGYYSNHQTFS 81
H I ++ Y NHQ ++
Sbjct: 53 HHIQQQQLQYGYHNHQNYN 71
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 18.2 bits (35), Expect = 8.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 137 HQIWNRRFHGYYSNHQTFS 81
H I ++ Y NHQ ++
Sbjct: 53 HHIQQQQLQYGYHNHQNYN 71
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 18.2 bits (35), Expect = 8.1
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -3
Query: 137 HQIWNRRFHGYYSNHQTFS 81
H I ++ Y NHQ ++
Sbjct: 53 HHIQQQQLQYGYHNHQNYN 71
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,257
Number of Sequences: 336
Number of extensions: 510
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 39
effective length of database: 109,481
effective search space used: 2189620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)
- SilkBase 1999-2023 -