Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C14
         (181 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   1.3  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         21   4.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   4.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   4.0  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    20   9.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           20   9.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    20   9.1  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 118 VSTAIIPTTRHFLF*VRTDDVNSNFRFM 35
           VST   PT RHF      D+ N NF ++
Sbjct: 132 VSTTETPT-RHFFCCCSGDNCNGNFSYL 158


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 128 WNRRFHGYYSNH 93
           W  R HGYY+N+
Sbjct: 197 WIIRPHGYYANY 208


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 51  VILDLCPSRVR 19
           V LDLCP RV+
Sbjct: 911 VSLDLCPQRVK 921


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein
          protein.
          Length = 1133

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 79 F*VRTDDVNSNFRFMS 32
          F +RT D+N+ FRF++
Sbjct: 44 FFLRTFDLNNGFRFIA 59


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 58  VNSNFRFMSKQGPPAR 11
           VNS+  +M +  PPA+
Sbjct: 544 VNSSGNYMCRSNPPAQ 559


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 178  STTPTASIAKFVTS 137
            ++TP+ S+A+ VTS
Sbjct: 1319 NSTPSRSVARIVTS 1332


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -3

Query: 173  HPHCLHCQICY 141
            H  CL C  CY
Sbjct: 1027 HQGCLDCPACY 1037


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,112
Number of Sequences: 2352
Number of extensions: 2210
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 38
effective length of database: 474,603
effective search space used:  9966663
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)