Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C14
         (181 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L13852-1|AAA75388.1| 1011|Homo sapiens ubiquitin-activating enzy...    28   6.2  
BT007026-1|AAP35672.1| 1012|Homo sapiens ubiquitin-activating en...    28   6.2  
BC006378-1|AAH06378.1| 1012|Homo sapiens ubiquitin-activating en...    28   6.2  
AF294032-1|AAG49557.1| 1011|Homo sapiens UBE1L protein protein.        28   6.2  

>L13852-1|AAA75388.1| 1011|Homo sapiens ubiquitin-activating enzyme
           E1-related protein protein.
          Length = 1011

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 179 IYHPHCLHCQICYLHQIWNRRFHG 108
           ++H HCLH   C LH+   +  HG
Sbjct: 284 VHHAHCLHQAFCALHKF--QHLHG 305


>BT007026-1|AAP35672.1| 1012|Homo sapiens ubiquitin-activating
           enzyme E1-like protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 179 IYHPHCLHCQICYLHQIWNRRFHG 108
           ++H HCLH   C LH+   +  HG
Sbjct: 284 VHHAHCLHQAFCALHKF--QHLHG 305


>BC006378-1|AAH06378.1| 1012|Homo sapiens ubiquitin-activating
           enzyme E1-like protein.
          Length = 1012

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 179 IYHPHCLHCQICYLHQIWNRRFHG 108
           ++H HCLH   C LH+   +  HG
Sbjct: 284 VHHAHCLHQAFCALHKF--QHLHG 305


>AF294032-1|AAG49557.1| 1011|Homo sapiens UBE1L protein protein.
          Length = 1011

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 179 IYHPHCLHCQICYLHQIWNRRFHG 108
           ++H HCLH   C LH+   +  HG
Sbjct: 284 VHHAHCLHQAFCALHKF--QHLHG 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,621,655
Number of Sequences: 237096
Number of extensions: 248972
Number of successful extensions: 741
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 76,859,062
effective HSP length: 39
effective length of database: 67,612,318
effective search space used: 1352246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)