Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C13
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.12 
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    22   2.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   2.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   3.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 26.2 bits (55), Expect = 0.12
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 236 DSEATQPKKPCLDKEIRNEDDHKLENN 316
           +  A+ PKK  + +EI +E DHK + N
Sbjct: 206 EKSASIPKKKEVKEEIEDEPDHKWKKN 232


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 185 DRMDVDEKLNRKRDLKDDSEATQPKKPC 268
           D +DVD+ LN  R L +  +    + PC
Sbjct: 28  DNVDVDKILNNDRVLTNYIKCLMDEGPC 55


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -2

Query: 335 CYPQHQCYFLVYGHLHFEFLCQD 267
           CYP+           HF  LCQD
Sbjct: 156 CYPRVSAQMKADLRSHFRALCQD 178


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 185 DRMDVDEKLNRKRDLKDDSEATQPKKPC 268
           D +DVD  L+ KR L +       K PC
Sbjct: 39  DNVDVDRILHSKRLLLNYINCLLEKGPC 66


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 185 DRMDVDEKLNRKRDLKDDSEATQPKKPC 268
           D +DV+  LN +R +   +     K PC
Sbjct: 26  DHLDVESILNNRRMVNYYAACLLSKGPC 53


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 275 CQDMAF*AVLPLNRLSN 225
           C+D A   V+PL +L N
Sbjct: 141 CKDAALRKVVPLKKLCN 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,205
Number of Sequences: 336
Number of extensions: 900
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)