Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C13
(408 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 5.4
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.1
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 7.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 9.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 20 9.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 20 9.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 20 9.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 20 9.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 9.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 9.4
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 5.4
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 185 DRMDVDEKLNRKRDLKDDSEATQPKKPCLD 274
+R+D++ KL + LK+ AT K C++
Sbjct: 1283 ERIDMNGKLRQSPRLKELVGATSIIKDCVE 1312
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 20.6 bits (41), Expect = 7.1
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 164 GNQQTIEDRMDVDEKLNRKRDLKDDSEATQPKKPCLDKEIRN-EDDHKLENN 316
GN+Q + D + NR+ D K + K +++ N ++D+K N
Sbjct: 457 GNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGN 508
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.6 bits (41), Expect = 7.1
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 255 GCVASESSFKSRFLFNFSSTSI 190
G +A +FK+ LF+F +T +
Sbjct: 137 GAMAERCNFKAYCLFSFLNTIV 158
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 7.1
Identities = 4/10 (40%), Positives = 8/10 (80%)
Frame = -3
Query: 91 FHSWSLIIYD 62
FH W +++Y+
Sbjct: 509 FHQWGILVYE 518
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 261 FLGCVASESSFKSR 220
FL C+A + SF+ R
Sbjct: 429 FLYCLAGDESFRKR 442
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 218 KRDLKDDSEATQPKKPCLDKEIRNEDDHKLENN 316
K +D E + K+P + + N+ H NN
Sbjct: 64 KERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 218 KRDLKDDSEATQPKKPCLDKEIRNEDDHKLENN 316
K +D E + K+P + + N+ H NN
Sbjct: 64 KERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 218 KRDLKDDSEATQPKKPCLDKEIRNEDDHKLENN 316
K +D E + K+P + + N+ H NN
Sbjct: 64 KERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 218 KRDLKDDSEATQPKKPCLDKEIRNEDDHKLENN 316
K +D E + K+P + + N+ H NN
Sbjct: 64 KERSRDRKERERSKEPKIISSLSNKTIHNNNNN 96
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +2
Query: 218 KRDLKDDSEATQPKKPCLDKEIRNEDDHKLENN 316
K +D E + K+P + + N+ H NN
Sbjct: 297 KERSRDRKERERSKEPKIISSLSNKTIHNNNNN 329
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 246 ASESSFKSRFLFNFSSTS 193
+S SSF S FL+ S +S
Sbjct: 953 SSSSSFYSSFLYKSSESS 970
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,794
Number of Sequences: 438
Number of extensions: 1098
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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