Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C11
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 247 1e-64
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 221 7e-57
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 209 3e-53
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 200 2e-50
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 200 2e-50
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 189 3e-47
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 186 2e-46
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 175 6e-43
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 169 2e-41
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 168 7e-41
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 166 2e-40
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 161 1e-38
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 147 1e-34
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 146 2e-34
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 132 3e-30
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 129 3e-29
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 123 2e-27
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 117 1e-25
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 117 1e-25
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 116 4e-25
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 116 4e-25
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 112 3e-24
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 111 6e-24
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 108 6e-23
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 100 2e-20
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 97 2e-19
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 96 4e-19
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 94 1e-18
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 87 2e-16
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 86 5e-16
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 84 1e-15
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 80 3e-14
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 73 5e-12
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 3e-09
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 61 1e-08
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 53 3e-06
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 52 7e-06
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 51 1e-05
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 49 5e-05
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 49 6e-05
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 48 1e-04
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 47 2e-04
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 46 3e-04
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 46 3e-04
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 46 5e-04
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 45 8e-04
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 45 0.001
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 45 0.001
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 44 0.001
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 44 0.002
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 43 0.004
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 42 0.006
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 42 0.006
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 42 0.007
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.007
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 42 0.010
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 42 0.010
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 41 0.013
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 41 0.017
UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1; Algoriph... 41 0.017
UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23; Bactero... 41 0.017
UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon ... 40 0.022
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 40 0.030
UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3; Bacteria... 40 0.030
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 40 0.039
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 39 0.052
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.069
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 38 0.091
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.091
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 38 0.091
UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n... 38 0.091
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.12
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 38 0.12
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 38 0.12
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 38 0.16
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 37 0.21
UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6; Bacteroidete... 37 0.21
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 37 0.28
UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1; Chaetosphaer... 37 0.28
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.37
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.37
UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1... 36 0.48
UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8; Mycoplas... 36 0.48
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 36 0.48
UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|R... 36 0.48
UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.48
UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.48
UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1; Filob... 35 0.84
UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep... 35 1.1
UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus R... 35 1.1
UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal pro... 35 1.1
UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1... 35 1.1
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 34 2.0
UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;... 33 2.6
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 33 2.6
UniRef50_A7IHC3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2; ... 33 3.4
UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellula... 33 3.4
UniRef50_Q3ZIZ5 Cluster: Chloroplast 30S ribosomal protein S2; n... 33 4.5
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 32 6.0
UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n... 32 6.0
UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter u... 32 6.0
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 6.0
UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=3... 32 6.0
UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95; Bacteri... 32 6.0
UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidat... 32 6.0
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 32 7.9
UniRef50_Q9M8M2 Cluster: Putative uncharacterized protein T21F11... 32 7.9
UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila melanogaster|... 32 7.9
UniRef50_Q86NF9 Cluster: VAB-10A protein; n=8; Caenorhabditis|Re... 32 7.9
UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;... 32 7.9
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 247 bits (604), Expect = 1e-64
Identities = 112/153 (73%), Positives = 126/153 (82%)
Frame = +3
Query: 30 THLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAF 209
THLG N++FQME Y+YKR+ DG ++INL+RTWEK E+PADV VISSR
Sbjct: 23 THLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNT 82
Query: 210 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 389
GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPRLL+V DP DHQP+TEASYVN+
Sbjct: 83 GQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNL 142
Query: 390 PVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
P IALCNTDSPLR+VDIAIPCN K +HS+GLMW
Sbjct: 143 PTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMW 175
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 221 bits (540), Expect = 7e-57
Identities = 99/153 (64%), Positives = 119/153 (77%)
Frame = +3
Query: 30 THLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAF 209
THLG NV+ QM YV+K +GDG +IN+R+TWEK E+PADV V++++ F
Sbjct: 23 THLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVIAAIENPADVCVLANKPF 82
Query: 210 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 389
GQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPRLLIV D DHQPITEA+YVNI
Sbjct: 83 GQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSDHQPITEAAYVNI 142
Query: 390 PVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
PVIA CNT+SPLR++D+AIPCN +S+GLMW
Sbjct: 143 PVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMW 175
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 209 bits (510), Expect = 3e-53
Identities = 98/154 (63%), Positives = 111/154 (72%)
Frame = +3
Query: 27 DTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRA 206
+THLGA NV E YV+ R DG HVIN+ +TWEK +P DV ISSR
Sbjct: 21 NTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRT 80
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP D Q I EASYVN
Sbjct: 81 FGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVN 140
Query: 387 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
IPVIAL + DSP FVD+AIPCN + HSIGL+W
Sbjct: 141 IPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIW 174
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 200 bits (487), Expect = 2e-50
Identities = 91/155 (58%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 27 DTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRA 206
+ HLG +N N+QME YV+KRR DG ++ NL +TWEK E+P D+ V S+R
Sbjct: 26 EVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARP 85
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP DHQPI E + N
Sbjct: 86 YGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGN 145
Query: 387 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIG-LMW 488
IP+IA C+TDSP+RFVDI IP N K HSIG L W
Sbjct: 146 IPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 200 bits (487), Expect = 2e-50
Identities = 92/152 (60%), Positives = 112/152 (73%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G++N+ +M+ YV+KRR DG H++NL +TWEK E+PADV V+S+R +G
Sbjct: 26 HIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADVCVVSTRTYG 85
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL++V DP D Q I EAS+VNIP
Sbjct: 86 HRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADAQAIKEASFVNIP 145
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
VIALC+TDS L VDIAIP N K SIGL+W
Sbjct: 146 VIALCDTDSILNHVDIAIPTNNKGRKSIGLIW 177
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 189 bits (461), Expect = 3e-47
Identities = 86/152 (56%), Positives = 109/152 (71%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
HLG +NV+FQME YV+KRR DG H+INL +TW+K E+P DV ++R +G
Sbjct: 47 HLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARPYG 106
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
QRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP D QPI+E ++VNIP
Sbjct: 107 QRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIP 166
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
IA C+TDSPL+ VDIAIP N K+ SIG ++
Sbjct: 167 TIAFCDTDSPLKNVDIAIPANNKAKQSIGCLY 198
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 186 bits (454), Expect = 2e-46
Identities = 86/151 (56%), Positives = 103/151 (68%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
HLG+ N N+QM+ YVY R +G H+I+L +TWEK E+PADV +I +
Sbjct: 24 HLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTW 83
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPRLLIV DP DHQP+ E S VNIP
Sbjct: 84 QRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPRLLIVCDPKGDHQPVREGSAVNIP 143
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
VI CNTDSPL+ VDI IPCN +SI LM
Sbjct: 144 VIGFCNTDSPLQCVDIGIPCN-NDKYSIALM 173
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 175 bits (425), Expect = 6e-43
Identities = 82/107 (76%), Positives = 91/107 (85%)
Frame = +3
Query: 168 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 347
E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR 208
Query: 348 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
DHQP+ EASYVN+P IALCNTDSPL +VDIAIPCN K +HS+G+MW
Sbjct: 209 VDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMW 255
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 169 bits (412), Expect = 2e-41
Identities = 79/152 (51%), Positives = 101/152 (66%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G +NV +M YVY R +G H+INL T EK +P +V V+S+R +G
Sbjct: 24 HIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYG 83
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
RAVLKF+ + G+ PIAGR+ PG TNQI F EPRLL+ DP D Q + E+SYV++P
Sbjct: 84 SRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRTDAQSLRESSYVSLP 143
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
VIALC+TDSPL +VDIAIPCN K SI LM+
Sbjct: 144 VIALCDTDSPLNYVDIAIPCNNKGKESIALMY 175
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 168 bits (408), Expect = 7e-41
Identities = 75/153 (49%), Positives = 105/153 (68%)
Frame = +3
Query: 30 THLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAF 209
THLG N++ +M+ Y++ R+ DGT V NL++ W K +DPA++ V+++R
Sbjct: 28 THLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTIDDPAEIAVVANRPD 87
Query: 210 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 389
QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP D Q I EASYVNI
Sbjct: 88 AQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVVDRQAILEASYVNI 147
Query: 390 PVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
P I+LCN+D+ L+F+D+AIPCN K+ SIGL++
Sbjct: 148 PTISLCNSDANLKFIDVAIPCNNKTPMSIGLIY 180
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 166 bits (404), Expect = 2e-40
Identities = 77/152 (50%), Positives = 101/152 (66%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H G +N + M+ Y++ R +GT++I+L TWEK E+P DV V S+R FG
Sbjct: 44 HFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQDVTVCSTRLFG 103
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
QRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D Q EAS VNIP
Sbjct: 104 QRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQAFREASLVNIP 163
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
VIA C+TD+PL FVDIAIPCN + +SI +M+
Sbjct: 164 VIAFCDTDAPLEFVDIAIPCNDRRRYSISMMY 195
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 161 bits (390), Expect = 1e-38
Identities = 80/153 (52%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
+LG+ N++F M+ YV+ R DGTHVINL T+EK E+P DV IS+++FG
Sbjct: 22 YLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYAVEEPKDVLAISTKSFG 81
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
RAV KFA GA + RFTPG FTN F EPRL+IV DP D Q + EA+Y NIP
Sbjct: 82 TRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNTDSQAVHEAAYANIP 141
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGL-MW 488
IALC+TD+ L +VD IPCNTK+ +S+GL MW
Sbjct: 142 CIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMW 174
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 147 bits (357), Expect = 1e-34
Identities = 73/156 (46%), Positives = 102/156 (65%), Gaps = 4/156 (2%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + ++F M+ YV R +G++++NL TW+ E P DV V+SSR G
Sbjct: 49 HVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVIAAIEQPQDVMVVSSRPIG 108
Query: 213 QRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRLLIVLDPAQDHQPITEASY 380
QRAV+KFA +T A+ + R+TPG TNQ +A F+EP+LLIV DP D Q I EASY
Sbjct: 109 QRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQLLIVTDPHLDRQAIVEASY 168
Query: 381 VNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
VNIPVIAL N+D+PL++VDI IP + + SI +++
Sbjct: 169 VNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIY 204
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 146 bits (355), Expect = 2e-34
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 2/141 (1%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX--EDPADVFVISSRA 206
H+GA N+NF ME YVY+R + + NL +TWEK E P+DV ++ R
Sbjct: 33 HIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVIAGISNETPSDVVAVAGRE 92
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+IV DP+ DHQ + E+ Y+N
Sbjct: 93 MAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLIIVSDPSVDHQALRESGYIN 152
Query: 387 IPVIALCNTDSPLRFVDIAIP 449
+P I N+D+ L+ V IAIP
Sbjct: 153 VPTIGFWNSDNRLKNVGIAIP 173
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 132 bits (320), Expect = 3e-30
Identities = 69/150 (46%), Positives = 97/150 (64%)
Frame = +3
Query: 30 THLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAF 209
THLG N +F+M +YKR +G ++NL R++EK + P++V VISSR
Sbjct: 6 THLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVISSRNS 63
Query: 210 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 389
GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP DH + EA YVN+
Sbjct: 64 GQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPRADHPFLMEAPYVNL 123
Query: 390 PVIALCNTDSPLRFVDIAIPCNTKSSHSIG 479
IAL N+ SPL + IAIP ++K +H++G
Sbjct: 124 LTIALRNSQSPLHCMGIAIPHDSKGAHTVG 153
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 129 bits (312), Expect = 3e-29
Identities = 62/153 (40%), Positives = 88/153 (57%)
Frame = +3
Query: 27 DTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRA 206
+ H+G M+ YV+K+R DG ++IN+ +T +K E P + +SS
Sbjct: 15 NVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEHPKHIIAVSSNN 74
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
Q A++KF+ I ++ PG TN+ F EPRLLI+ DP D Q + EASYVN
Sbjct: 75 IHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLDKQALLEASYVN 134
Query: 387 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
IPVI++CNTDS L ++DIAIP N K +S L+
Sbjct: 135 IPVISVCNTDSFLSYIDIAIPGNNKDRYSFALI 167
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 123 bits (296), Expect = 2e-27
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Frame = +3
Query: 30 THLGAENVNFQMETYVYKRRG-DGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRA 206
+HLG + N Y+Y R D ++I++ TWEK + P+ + V+S++
Sbjct: 27 SHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARAFCGIKHPSSIAVVSTKT 86
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
FG++ V+KF GATPI GRF PG+FTN +PR+LIV D D Q I E+ Y N
Sbjct: 87 FGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTYADKQAILESQYCN 146
Query: 387 IPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
+P IA NTD+ L VDIAIP N +S +I
Sbjct: 147 LPTIAFVNTDNSLVGVDIAIPMNNRSPSAI 176
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 117 bits (282), Expect = 1e-25
Identities = 56/95 (58%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 207 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 386
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 387 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIG-LMW 488
IP IA C+ DSP+R+VDI I N K H+IG L W
Sbjct: 93 IPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFW 127
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 117 bits (282), Expect = 1e-25
Identities = 54/152 (35%), Positives = 89/152 (58%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + ME++VY+ R +G +V+++R+ E+ DP D+ V++SR +
Sbjct: 48 HIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDIIVVASRPYA 106
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
R V KFA G+ + GR PG FTN + + EP++L+V DP D Q I EA+ V IP
Sbjct: 107 YRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAIKEAAKVGIP 166
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
++A +TD+ + ++D+ IP N K S+ L++
Sbjct: 167 IVAFADTDAKIDYIDLIIPANNKGRKSLALLY 198
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 116 bits (278), Expect = 4e-25
Identities = 54/101 (53%), Positives = 68/101 (67%)
Frame = +3
Query: 96 GTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFT 275
G +INL +TWEK E+P D+ V S+R +GQRAVLKFA +TGA IAGR T
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHT 105
Query: 276 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVI 398
PG FTNQ+Q +F EPRLLI+ DP DHQPI E++ P++
Sbjct: 106 PGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPLL 146
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 116 bits (278), Expect = 4e-25
Identities = 55/152 (36%), Positives = 88/152 (57%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + + M+ Y++K R DG +++++++T K E P D+ V++ R +
Sbjct: 18 HIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQYA 76
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
R V KFA TGAT I GRF PG TN ++E +++IV DP D Q + EA + IP
Sbjct: 77 FRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDPLADVQAMKEAVKIGIP 136
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
+IALC+ ++ FVD+ IP N K S+ +++
Sbjct: 137 IIALCDANNKTDFVDLIIPTNNKGRRSLAVIY 168
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 112 bits (270), Expect = 3e-24
Identities = 48/152 (31%), Positives = 83/152 (54%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + ME ++Y+ R DG +V+++R+T E+ E P D+ +S R +
Sbjct: 19 HIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVSRRIYT 77
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
+ +F +TG +AGRF PG TN F EP ++ + DP D Q + EA+ + +P
Sbjct: 78 MGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEATEIGVP 137
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
++ LC+T+ F+D+ IP N K ++ L++
Sbjct: 138 IVGLCDTEHLTSFIDLVIPTNNKGKKAVALIY 169
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 111 bits (268), Expect = 6e-24
Identities = 54/142 (38%), Positives = 81/142 (57%)
Frame = +3
Query: 63 METYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAH 242
ME ++Y R DG +++++++T E+ DP+ V+S R +G R V KF
Sbjct: 36 MEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVSGRQYGHRPVRKFCGL 94
Query: 243 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSP 422
G P+ GR PG FTN + F E L++V DP D Q + EA + IPVIALC+TDSP
Sbjct: 95 VGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAGTMGIPVIALCDTDSP 154
Query: 423 LRFVDIAIPCNTKSSHSIGLMW 488
+ VD+ IP N + ++ L++
Sbjct: 155 ISNVDLIIPTNNRGRKALALIF 176
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 108 bits (260), Expect = 6e-23
Identities = 55/152 (36%), Positives = 85/152 (55%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + M +VY+ R DG +V++++ T E+ DPA + V+SSR +G
Sbjct: 49 HIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARILVVSSRQYG 107
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
Q F+ G + GRF PG+ TN F EP ++IV DPA D Q + EAS + +P
Sbjct: 108 QHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVLKEASSIGVP 167
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
V+ALC+T++ VD+ IP N K ++ L++
Sbjct: 168 VVALCDTNNLTSNVDLVIPTNNKGRKALSLVY 199
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 100 bits (239), Expect = 2e-20
Identities = 41/77 (53%), Positives = 59/77 (76%)
Frame = +3
Query: 258 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD 437
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVD 62
Query: 438 IAIPCNTKSSHSIGLMW 488
AIPCN ++++SI ++W
Sbjct: 63 CAIPCNNRNNYSIAMIW 79
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 96.7 bits (230), Expect = 2e-19
Identities = 49/152 (32%), Positives = 80/152 (52%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G + ME ++++ R DG +V+++ T E+ E P + SSR +G
Sbjct: 91 HIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQILAASSRQYG 149
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
+ KFA GA GRF PG TN + EP +++V DP D Q + EA V IP
Sbjct: 150 RFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAVKEAITVGIP 209
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
VIA+C++++ VD+ +P N K ++ +++
Sbjct: 210 VIAMCDSNNTTSNVDLVVPTNNKGRKALSVVY 241
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 95.9 bits (228), Expect = 4e-19
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 89
Query: 465 SHSIG-LMW 488
+SIG L W
Sbjct: 90 RNSIGCLFW 98
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 94.3 bits (224), Expect = 1e-18
Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Frame = +3
Query: 36 LGAENVN--FQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAF 209
LGA N Q +++ R DG + NL+R E+ P+ V V S++ +
Sbjct: 28 LGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PSRVMVHSTKPY 86
Query: 210 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNI 389
+ + F G P+ GR PG TN + LL+V DP D Q I EAS I
Sbjct: 87 AFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQAINEASLTGI 146
Query: 390 PVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
PVIAL +TDS F+D+ IPCN K +S+ L++
Sbjct: 147 PVIALVDTDSDPTFIDLMIPCNNKGRNSLALVF 179
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 87.0 bits (206), Expect = 2e-16
Identities = 58/151 (38%), Positives = 74/151 (49%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
HL N + Q++ YVYK++ DG +VIN + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN-----RSFCSQLEPLLPLKTQLMSVVTSSRTTG 55
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
Q+AVL FAA G+ P +GRFTPG T+Q+ QP + YVN+P
Sbjct: 56 QQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSLASQYVNLP 96
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
IAL + DS DIA PCN K HS+GLM
Sbjct: 97 PIALYDADSSWCSADIA-PCNIKGVHSVGLM 126
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 85.8 bits (203), Expect = 5e-16
Identities = 42/152 (27%), Positives = 74/152 (48%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
H+G ++ M+ YV K R DG + ++R+ E+ E P ++ V+ R
Sbjct: 16 HIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRRETA 74
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
+ KF+ T GR+ PG TN + EP ++++ DP D + +A I
Sbjct: 75 ITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYESGIT 134
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
++ALC+T+ ++D IP N + S S+ L++
Sbjct: 135 ILALCDTNHTKNYIDFCIPANNRGSKSLALIY 166
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 84.2 bits (199), Expect = 1e-15
Identities = 41/152 (26%), Positives = 78/152 (51%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 212
++GA V+F+M+ ++ K++ + + INL T++ + +I ++
Sbjct: 16 YIGAAYVDFRMKNHIIKQKNNLNNKINLFTTYKNLIYLPSLLFSISSMRKLAIIDTKCIS 75
Query: 213 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 392
++A+ + I + PG F+N+ +F P IV +P D + I E S +NIP
Sbjct: 76 RKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIRELSNINIP 135
Query: 393 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 488
+I +CNTD+ + F+D +P NT S S +++
Sbjct: 136 IIGICNTDTNISFIDWVLPSNTNSKFSNAMIF 167
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 79.8 bits (188), Expect = 3e-14
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +3
Query: 81 KRRGDGTHVINLRRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKFAAHTGA 251
+R+ DG+ I + WEK ++PA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 252 TPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF 431
IA RFTPG+ TN + F+E R++IV+DP HQ + +A F
Sbjct: 70 INIADRFTPGSSTNYVTRWFKETRVIIVIDPHVSHQAMHKA-----------------LF 112
Query: 432 VDIAIPCNTKSSHSIGLMW 488
VDIAIP N + HS+ ++W
Sbjct: 113 VDIAIPGNVRGRHSVVILW 131
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 72.5 bits (170), Expect = 5e-12
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Frame = +3
Query: 63 METYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAH 242
M+ ++ GT+ ++L T + +++ V S + + + KFA
Sbjct: 32 MKQFISDTDPTGTYTLDLEAT-QGRIKAAAQFIEHTGASELIVCSGKDSARVPIRKFAEL 90
Query: 243 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSP 422
G I RF PG TN + EP+LL+V DP D Q +TEA+ IPVI + N+D+
Sbjct: 91 VGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNV 150
Query: 423 LRFVDIAIPCNTKSSHSI-GLMW 488
+D+ IP N + ++ + W
Sbjct: 151 TSRLDVIIPANNRGRGALAAIFW 173
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 3e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +3
Query: 222 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 356
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 60.9 bits (141), Expect = 1e-08
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +3
Query: 78 YKRRGDGTHVINLRRTWEKXXXXXXXXXXX-EDPADVFVISSRAFGQRAVLKFAAHTGAT 254
Y + DGT++ L RTWEK E+ +V +ISS TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISSLGTN---------FTGAI 107
Query: 255 PIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 380
P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 108 PTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 53.2 bits (122), Expect = 3e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ VD IP N
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 465 SHSIGLM 485
S L+
Sbjct: 222 PQSTCLL 228
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 52.0 bits (119), Expect = 7e-06
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
F I+ + P +LI++DP D I EA +NIPVIAL NT++ + +D IP N S
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYS 258
Query: 465 SHSIGLM 485
SI L+
Sbjct: 259 VKSITLI 265
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P +L++ DP ++ +TEA + IPVIALCNT+S + + IP N + S+ L+
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLL 256
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 49.2 bits (112), Expect = 5e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+ +D IP N +
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDT 207
Query: 465 SHSIGLM 485
S SI ++
Sbjct: 208 SRSIAII 214
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 48.8 bits (111), Expect = 6e-05
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = -3
Query: 133 FSHVRRRLITCVPSPRRL*TYVSIWKLTFSAPKWV 29
FS V RL PS RRL TY SIWKLTFS P+WV
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWV 55
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 47.6 bits (108), Expect = 1e-04
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P LIV+DP D + EA +NIPVI LC+T+ V + IP N S+ +M
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P+++I+ DP + I EA + IPVIA+CNT++ VD IP N S S+ L+
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLL 318
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3
Query: 300 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + IP N S
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P L+++L+P ++ I E IP I LC+TD + IPCN S S+ LM
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLM 428
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 46.0 bits (104), Expect = 5e-04
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
+P LL+V+D ++H I EA +NIPV+A+ +T+S VD IP N S SI L
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRL 216
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P LLIV+DP + + EA + IPV+AL +T+ ++ IPCN S SI L+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLI 215
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS +D +P N +
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDA 206
Query: 465 SHSIGLM 485
SI L+
Sbjct: 207 IRSIQLI 213
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/67 (29%), Positives = 40/67 (59%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+ + V++ IP N S
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDS 205
Query: 465 SHSIGLM 485
+I L+
Sbjct: 206 IKAIDLI 212
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R+P +L+V+D ++ + EA +NIP+++L +T+ D+ IP N + SI L+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLI 213
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P L+++L+P ++ I E IP I LC+TD + IPCN S + LM
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLM 418
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P + V+D ++H + EA + IPV+A+ +T+S VD AIP N + SI L
Sbjct: 158 PSAMFVVDLPKEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKL 212
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 42.3 bits (95), Expect = 0.006
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P +IV+DP D + EA + +I + ++D+ FVD+ IP N S SI L+
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLI 232
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +3
Query: 285 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ +D+ IP N +
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDA 206
Query: 465 SHSIGLM 485
++ L+
Sbjct: 207 IRAVRLI 213
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P + ++D ++H ++EA +NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 156 RLPAAIFLIDVKKEHIAVSEALKLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.007
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +3
Query: 222 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 383
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 384 NIPVIALC 407
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P LL+VL+P ++ + EA +P IA+ +TDS V IP N S S+ +
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFL 372
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 291 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 470
N ++ R P ++ ++DP ++ + EA + I +AL +TDS +D+ IP N
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPIPGNDDGIR 208
Query: 471 SIGLM 485
S+ ++
Sbjct: 209 SVEMI 213
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 41.1 bits (92), Expect = 0.013
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 434
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 40.7 bits (91), Expect = 0.017
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P + V+DP ++H ++EA+ + +PV+AL +T++ + IP N + SI L+
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNADPSKIQYIIPGNDDAIRSIKLI 229
>UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1;
Algoriphagus sp. PR1|Rep: 30S ribosomal protein S2 -
Algoriphagus sp. PR1
Length = 253
Score = 40.7 bits (91), Expect = 0.017
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P L ++D ++H I EA + IPV AL +T+S V+ IP N + S+ L+
Sbjct: 156 RLPAALFIVDIKREHIAIAEAKKLGIPVYALVDTNSNPNEVEFPIPANDDAFKSVSLL 213
>UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23;
Bacteroidetes|Rep: 30S ribosomal protein S2 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 281
Score = 40.7 bits (91), Expect = 0.017
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P L V+D ++H + EA+ + IPV A+ +T+S +D IP N + +I L+
Sbjct: 156 RLPSALFVVDVMKEHIAVREANRLGIPVFAMVDTNSDPSLIDYVIPSNDDALKAIELI 213
>UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon
luteolum DSM 273|Rep: Ribosomal protein S2 - Pelodictyon
luteolum (strain DSM 273) (Chlorobium luteolum (strain
DSM273))
Length = 253
Score = 40.3 bits (90), Expect = 0.022
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P L ++D ++H I EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 156 RLPAALFIVDIKKEHIAIKEARSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLM 213
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 39.9 bits (89), Expect = 0.030
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 291 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 470
N ++ R P L+++DP ++ I EA + I +AL +TD +D+ +P N
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPVPGNDDGIR 212
Query: 471 SIGL 482
SI L
Sbjct: 213 SIEL 216
>UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3;
Bacteria|Rep: 30S ribosomal protein S2 - Chlorobium
tepidum
Length = 249
Score = 39.9 bits (89), Expect = 0.030
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P L V+D ++H + EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 157 RLPAALFVVDIKKEHIAVKEARSLGIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLM 214
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 39.5 bits (88), Expect = 0.039
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
R P + V+DP ++ + EA+ + IPV+AL +T+ +D IP N + SI L+
Sbjct: 159 RLPGAVYVVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLI 216
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 39.1 bits (87), Expect = 0.052
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P LL V+D ++ I EA + IPV+A+ +T+ + VD IP N ++ +I L
Sbjct: 161 PDLLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCSPKGVDYVIPGNDDAARAIAL 215
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.069
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 273 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 416
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 38.3 bits (85), Expect = 0.091
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
P ++ V+DP ++H + EA + IPV+A+ +T+ + AIP N S I
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCI 214
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.091
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 306 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 446
+F P + I L +QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 38.3 bits (85), Expect = 0.091
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P + V+D ++H + EA +NIPVIA+ +T+ VD IP N + S L+
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALL 213
>UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n=3;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S2 -
Guillardia theta (Cryptomonas phi)
Length = 235
Score = 38.3 bits (85), Expect = 0.091
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +3
Query: 291 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 470
N I+ R P L++++D ++ + E + IP+I++ +T+ DIAIP N +
Sbjct: 148 NGIKNMKRLPDLVVIVDQKRETTAVQECRTLGIPIISILDTNCNPDLTDIAIPGNDDAIR 207
Query: 471 SIGLM 485
SI L+
Sbjct: 208 SIKLI 212
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 37.9 bits (84), Expect = 0.12
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +3
Query: 243 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 359
T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 17 TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 37.9 bits (84), Expect = 0.12
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
P L+++L+P ++ EA ++P I + +TD+ R V IP N S
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDS 228
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P L V+D +H I EA+ + IPV A+ +T+S VD IP N + ++ L
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTL 212
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 37.5 bits (83), Expect = 0.16
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 297 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
I+ R P + V+D ++H + EA+ + IPV+A+ +T+ ++ IP N + SI
Sbjct: 159 IKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPVVAVVDTNCDPEGIEYVIPGNDDAIRSI 218
Query: 477 GL 482
L
Sbjct: 219 RL 220
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 37.1 bits (82), Expect = 0.21
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P + V+D +TEA+ + +PVIA+ +T+ VD IP N SS ++ L
Sbjct: 157 PDAIFVVDVGYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6;
Bacteroidetes/Chlorobi group|Rep: Ribosomal protein S2 -
Microscilla marina ATCC 23134
Length = 272
Score = 37.1 bits (82), Expect = 0.21
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
R P L V+D ++H I EA + IPV A+ +T+S V +P N + SI
Sbjct: 156 RLPAALFVVDVKREHIAIAEAHKLGIPVFAMVDTNSNPGAVQFPVPANDDAFKSI 210
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 36.7 bits (81), Expect = 0.28
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
R P+L+ ++DP +++ + E + IP++A+ +T+ +D IP N + +I L
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKL 212
>UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S2 -
Chaetosphaeridium globosum
Length = 191
Score = 36.7 bits (81), Expect = 0.28
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF-VDIAIPCNTKS 464
++ P LIV +P + I EA+ + IPV++L N++ P +D IP N S
Sbjct: 120 SYDRPSCLIVFNPCLNFTAIQEANTLGIPVVSLMNSNVPNHLKIDYPIPVNHNS 173
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.37
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 354 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 446
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.37
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 354 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 446
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1;
uncultured marine gamma proteobacterium EBAC20E09|Rep:
Predicted 30S ribosomal protein S2 - uncultured marine
gamma proteobacterium EBAC20E09
Length = 277
Score = 35.9 bits (79), Expect = 0.48
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P + V+D + + EA + IP+IAL +T+S +D+ IP N + SI L+
Sbjct: 132 PDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDAIRSIRLI 187
>UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
agalactiae
Length = 317
Score = 35.9 bits (79), Expect = 0.48
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P +IV DP D + EA + VI + +++S VD IP N S+ SI L+
Sbjct: 192 PSFMIVADPNVDAIAVKEARSKGVKVIGILDSNSNPDAVDFGIPANDDSAKSITLI 247
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 35.9 bits (79), Expect = 0.48
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +3
Query: 279 GAFTNQIQAAF---REPRLLIVL-DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 446
G TN+ + F + L+I+L +++ +TE ++ NIP+I L NT+S + +++ I
Sbjct: 116 GLLTNKTVSNFLKHNKINLIILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPI 175
Query: 447 PCNTKSSHSI 476
NTK+ S+
Sbjct: 176 FSNTKNLKSL 185
>UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|Rep:
Rps2 protein - Ostreococcus tauri
Length = 226
Score = 35.9 bits (79), Expect = 0.48
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P L++++ + + E +NIP I L +++ FV IP N S+ S+ +
Sbjct: 164 PDLVVIVGQPNERNAVLECQKLNIPTITLLDSNCDPTFVSYGIPANDDSARSVAFI 219
>UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n=2;
Embryophyta|Rep: Chloroplast 30S ribosomal protein S2 -
Marchantia polymorpha (Liverwort)
Length = 235
Score = 35.9 bits (79), Expect = 0.48
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
P ++I++D ++ I E + IP I L +TD DI IP N + SI
Sbjct: 162 PDIVIIIDQQKEFTAIQECITLGIPTICLVDTDCDPDMTDIPIPANDDARASI 214
>UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2;
n=252; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 35.9 bits (79), Expect = 0.48
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
P ++I+LD +++ + E + IP I+L +T+ DI+IP N + SI
Sbjct: 162 PDIVIILDQQEEYTALRECITLGIPTISLIDTNCNPDLADISIPANDDAIASI 214
>UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 307
Score = 35.1 bits (77), Expect = 0.84
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +3
Query: 183 VFVISSRAFGQRAVLKFAAHTGATPIA-GRFTPGAFTNQ---------IQAAFREPRLLI 332
V ++ +R Q+ + K A G++ PG TN + +++ P L+I
Sbjct: 162 VLIVGTRPGHQKMIQKAKERLEDNGFAVGQWIPGLLTNAETFFGMKPLLDKSYK-PDLVI 220
Query: 333 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
L+ +++ I E + +IP + + +TD+ R V IP N +S + L+
Sbjct: 221 FLNASENTPAIRECTSRHIPTVGIVDTDTDPRLVTYPIPANMESMRTAELI 271
>UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep:
Ribosomal protein S2 - Desulfuromonas acetoxidans DSM
684
Length = 256
Score = 34.7 bits (76), Expect = 1.1
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 297 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 476
I+ + P + V+DP ++ + EA + IPV+A+ +T+ +D IP N + +I
Sbjct: 151 IKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPVVAVVDTNCDPDEIDYIIPGNDDAIRAI 210
Query: 477 GL 482
L
Sbjct: 211 RL 212
>UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Ribosomal protein S2 - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 312
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG 479
P ++ V+D + + EA +++P+I + +T+ +D IP N S +IG
Sbjct: 157 PDVIFVIDIGVEKNAVAEAKKLHLPIIGIVDTNHSPEGIDYVIPGNDDSIRAIG 210
>UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal
protein S2; n=7; Eurotiomycetidae|Rep:
Mitochondrial/chloroplast ribosomal protein S2 -
Aspergillus oryzae
Length = 424
Score = 34.7 bits (76), Expect = 1.1
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P L++ L+P ++ + E N+P I + +TD+ V IP N S +IG++
Sbjct: 244 KPDLVVCLNPLENVVLLHECGLNNVPTIGVIDTDADPTRVTYPIPSNDDSMRAIGVI 300
>UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S2 - Prototheca wickerhamii
Length = 274
Score = 34.7 bits (76), Expect = 1.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 464
++P ++ + +P + I EA+ + IPVI + S + IPCN S
Sbjct: 201 KKPDVIFIFNPGDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTS 251
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +3
Query: 33 HLGAENVNFQMETYVYKRRGDGT-HVINL 116
H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 24 HIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 594
Score = 33.5 bits (73), Expect = 2.6
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 189 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE----PRLLIVLDPAQDH 356
V SR+ Q V++ A GA P+AG A ++++ A R+ PRL+I+ + DH
Sbjct: 182 VEQSRSALQFVVVQEAESQGAAPLAGVAVVQATPDEVEEARRQDLTVPRLIILEEVQADH 241
Query: 357 QPITEASYVNIP 392
+T + ++P
Sbjct: 242 PEVTADAIRDVP 253
>UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;
Candidatus Pelagibacter ubique|Rep: Probable 30S
ribosomal protein S2 - Candidatus Pelagibacter ubique
HTCC1002
Length = 273
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P L+ ++D + I EAS + IP+ A+ +++S +D IP N + +I L
Sbjct: 159 PDLVFIIDTNYESLAIAEASKLGIPICAILDSNSNPDGIDYPIPGNDDARRAIDL 213
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 282 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 145
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
>UniRef50_A7IHC3 Cluster: Putative uncharacterized protein; n=1;
Xanthobacter autotrophicus Py2|Rep: Putative
uncharacterized protein - Xanthobacter sp. (strain Py2)
Length = 186
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 191 NKHISWILHGDNSTSSEYKLFPCTPKINYVRTVTTAFINVRLHLEINIFRSQMGVAASIL 12
+K + ++++ D S SEY L INY+ + I + +N+ R M +AAS L
Sbjct: 102 DKELKFVMNEDISRQSEYILSKVDDHINYIAPIDNTAILKNYYDALNLSRKWMRLAASAL 161
>UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 414
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3
Query: 276 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCN 455
PG + P L++ ++P +++ + E + NIP I + +T++ +V IP N
Sbjct: 259 PGFEEQLFNRSVLRPDLVVCMNPLENYVLLHECALNNIPTIGVIDTNADPTWVTYPIPAN 318
Query: 456 TKSSHSI 476
S I
Sbjct: 319 DDSHRCI 325
>UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 398
Score = 33.1 bits (72), Expect = 3.4
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P L++VL+P +++ + E IP I + +T++ + V IP N S S+ ++
Sbjct: 271 PDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVI 326
>UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellular
organisms|Rep: 30S ribosomal protein S2 - Xylella
fastidiosa
Length = 266
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 312 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
R P + V+D + I EA + IPV+A+ +T+ VD IP N + ++ L
Sbjct: 156 RIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQL 212
>UniRef50_Q3ZIZ5 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Pseudendoclonium akinetum|Rep: Chloroplast 30S ribosomal
protein S2 - Pseudendoclonium akinetum (Green alga)
Length = 258
Score = 32.7 bits (71), Expect = 4.5
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 279 GAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNT 458
G + + I+ P ++I++ +++ + E + I I + +TD D+ IP N
Sbjct: 154 GKYLDGIKNMASIPDIVIIIGQSEEINAVRECKKLGIRTITILDTDCDPSLADLFIPAND 213
Query: 459 KSSHSIGLM 485
S SI L+
Sbjct: 214 DSISSIKLL 222
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 252 LRQCGQQI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 142
L+Q Q + QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n=1;
Gallus gallus|Rep: UPI00004488FF UniRef100 entry -
Gallus gallus
Length = 107
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 340 SKTINSLGSRNAAWIWLVN-APGVKRPAIGVAPVWAANLS 224
S TI + S ++W+ LV PG + P +G AP W ++LS
Sbjct: 2 SLTIWDVCSAASSWLSLVGFRPGSEAPCVGTAPGWGSSLS 41
>UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter
usitatus Ellin6076|Rep: Ribosomal protein S2 -
Solibacter usitatus (strain Ellin6076)
Length = 303
Score = 32.3 bits (70), Expect = 6.0
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P +L V+D ++ + EA + IPV+A+ +T+ VD IP N + +I L
Sbjct: 159 PDVLFVIDSNKEGIAVKEARRLGIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRL 213
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 204 AFGQRAVLKFAAHTGATPIAGRFTP 278
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 424
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 315 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
+P L++ L+P ++ + E IP I + +TD+ V IP N S S+ ++
Sbjct: 317 KPDLVVCLNPLENRPLLHECGLHVIPTIGIIDTDANPTHVTYPIPANDDSLRSVAVI 373
>UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=38;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 219
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD-IAIPCNTKSS 467
P ++V D + I EAS + IPV+A+ + + PL F + I P + S
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARDS 181
>UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95;
Bacteria|Rep: 30S ribosomal protein S2 -
Rhodopseudomonas palustris
Length = 331
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 482
P L+ V+D ++ I EA + IPV A+ +T+ + + +P N + +I L
Sbjct: 160 PDLIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIAL 214
>UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidatus
Phytoplasma asteris|Rep: 30S ribosomal protein S2 -
Onion yellows phytoplasma
Length = 271
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P+ + V+DP ++ + EA + I V + +T+ VD IP N + + L+
Sbjct: 158 PQAIFVVDPEKESIAVAEARKLGIKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLI 213
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +3
Query: 318 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 485
P L++ L+P +++ + E +IP I + +T++ +V IP N S ++ ++
Sbjct: 262 PDLVVCLNPLENYTLLYECGLKSIPTIGVIDTNADPSWVTYTIPANDDSLRAMAVV 317
>UniRef50_Q9M8M2 Cluster: Putative uncharacterized protein
T21F11.13; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein T21F11.13 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 481
Score = 31.9 bits (69), Expect = 7.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 185 HISWILHGDNSTSSEYKLFPCTPKINYVRT 96
H + + G N T+S Y PC P +NY+RT
Sbjct: 79 HFNIYVDGWNVTNSHYIAPPCNPSLNYLRT 108
>UniRef50_Q8SZ38 Cluster: RE18076p; n=1; Drosophila
melanogaster|Rep: RE18076p - Drosophila melanogaster
(Fruit fly)
Length = 528
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 158 NSTSSEYKLFPCTPKINYVRTVTTAFINVRLHL 60
N S Y FP PK+ YV V T+ NV HL
Sbjct: 204 NQYPSIYNKFPSYPKVEYVSVVNTSDANVTQHL 236
>UniRef50_Q86NF9 Cluster: VAB-10A protein; n=8; Caenorhabditis|Rep:
VAB-10A protein - Caenorhabditis elegans
Length = 3436
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 201 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 371
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>UniRef50_Q55F37 Cluster: Putative MADS-box transcription factor;
n=1; Dictyostelium discoideum AX4|Rep: Putative MADS-box
transcription factor - Dictyostelium discoideum AX4
Length = 1050
Score = 31.9 bits (69), Expect = 7.9
Identities = 23/76 (30%), Positives = 33/76 (43%)
Frame = -1
Query: 282 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQRVQAFPMYAED*LR 103
HQ+ QQ Q QQ QH Q H Q Q P+ QQH+Q Q P + +
Sbjct: 535 HQQHQHQQHPQMQQQQQQQQQH--QQHPQMQQIQQQQHPQMQQHQQHQQQHPQMQQQHMN 592
Query: 102 AYRHHGVYKRTSPSGN 55
++ + + +SP N
Sbjct: 593 NHQINHHHLNSSPEIN 608
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,354,501
Number of Sequences: 1657284
Number of extensions: 8985491
Number of successful extensions: 21792
Number of sequences better than 10.0: 114
Number of HSP's better than 10.0 without gapping: 21112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21727
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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