Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C10
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   1.1  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   3.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   3.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   3.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 324 FIYIISKSLELISLHYRYISFFKDIFKLHDLI*VSISKL 208
           F Y++SK   L       +  F DIF +  L+ +S S L
Sbjct: 175 FFYLVSKIESLACELKNTVDDFNDIFGISFLLIISYSTL 213


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 176 DNRVNYSN*HYYVFGNQPHA 117
           +NRV Y+  +  VFGN   A
Sbjct: 90  ENRVKYNQNYSKVFGNDEKA 109


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 176 DNRVNYSN*HYYVFGNQPHA 117
           +NRV Y+  +  VFGN   A
Sbjct: 150 ENRVKYNQNYSKVFGNDEKA 169


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 176 DNRVNYSN*HYYVFGNQPHA 117
           +NRV Y+  +  VFGN   A
Sbjct: 150 ENRVKYNQNYSKVFGNDEKA 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,813
Number of Sequences: 336
Number of extensions: 1293
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)