BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C10
(395 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022397-1|AAY54813.1| 111|Drosophila melanogaster IP05405p pro... 82 2e-16
BT022374-1|AAY54790.1| 111|Drosophila melanogaster IP05205p pro... 82 2e-16
AE014296-2099|AAF49955.3| 106|Drosophila melanogaster CG10861-P... 72 3e-13
X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein pr... 27 9.0
U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa pro... 27 9.0
AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p pro... 27 9.0
AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p pro... 27 9.0
AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein... 27 9.0
AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby p... 27 9.0
AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,... 27 9.0
AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,... 27 9.0
AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,... 27 9.0
AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,... 27 9.0
>BT022397-1|AAY54813.1| 111|Drosophila melanogaster IP05405p
protein.
Length = 111
Score = 82.2 bits (194), Expect = 2e-16
Identities = 33/39 (84%), Positives = 38/39 (97%)
Frame = +1
Query: 10 LYVNQTFAPSPDQIVKNLYECFGTDGKLVLHYCKSQAWG 126
LYVNQTFAP+PDQI+KNLYEC GT+GKLVL+YCK+QAWG
Sbjct: 73 LYVNQTFAPAPDQIIKNLYECHGTNGKLVLYYCKNQAWG 111
>BT022374-1|AAY54790.1| 111|Drosophila melanogaster IP05205p
protein.
Length = 111
Score = 82.2 bits (194), Expect = 2e-16
Identities = 33/39 (84%), Positives = 38/39 (97%)
Frame = +1
Query: 10 LYVNQTFAPSPDQIVKNLYECFGTDGKLVLHYCKSQAWG 126
LYVNQTFAP+PDQI+KNLYEC GT+GKLVL+YCK+QAWG
Sbjct: 73 LYVNQTFAPAPDQIIKNLYECHGTNGKLVLYYCKNQAWG 111
>AE014296-2099|AAF49955.3| 106|Drosophila melanogaster CG10861-PA
protein.
Length = 106
Score = 71.7 bits (168), Expect = 3e-13
Identities = 28/34 (82%), Positives = 33/34 (97%)
Frame = +1
Query: 25 TFAPSPDQIVKNLYECFGTDGKLVLHYCKSQAWG 126
TFAP+PDQI+KNLYEC GT+GKLVL+YCK+QAWG
Sbjct: 73 TFAPAPDQIIKNLYECHGTNGKLVLYYCKNQAWG 106
>X59772-1|CAB36921.1| 850|Drosophila melanogaster ovo protein
protein.
Length = 850
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 232 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 263
>U11383-1|AAB60216.1| 1028|Drosophila melanogaster Ovo-1028aa
protein.
Length = 1028
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 232 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 263
>AY119649-1|AAM50303.1| 975|Drosophila melanogaster RE46053p
protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 179 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 210
>AY094838-1|AAM11191.1| 1351|Drosophila melanogaster LD47350p
protein.
Length = 1351
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 733 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 764
>AJ430589-1|CAD23207.1| 1222|Drosophila melanogaster ovoA protein
protein.
Length = 1222
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 604 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 635
>AJ430588-1|CAD23206.1| 1354|Drosophila melanogaster shavenbaby
protein.
Length = 1354
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 733 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 764
>AE014298-702|AAF46002.2| 975|Drosophila melanogaster CG6824-PA,
isoform A protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 179 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 210
>AE014298-701|ABC67174.1| 1028|Drosophila melanogaster CG6824-PD,
isoform D protein.
Length = 1028
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 232 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 263
>AE014298-700|AAF46003.2| 1222|Drosophila melanogaster CG6824-PC,
isoform C protein.
Length = 1222
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 604 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 635
>AE014298-699|AAF46001.2| 1351|Drosophila melanogaster CG6824-PB,
isoform B protein.
Length = 1351
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 115 GFCNNAAQAFHQFRSTRKDSSQSDQAMERMSD 20
G C N A QF +T SSQ+D +E++SD
Sbjct: 733 GQCPNGAVDPLQFTATLMLSSQTDHLLEQLSD 764
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,061,253
Number of Sequences: 53049
Number of extensions: 215327
Number of successful extensions: 386
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -