Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C09
         (330 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81094-4|CAB03152.1|  528|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p...    27   3.2  
Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical pr...    26   7.3  
U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.          26   7.3  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    26   7.3  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    26   7.3  
AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical ...    26   7.3  
Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z81083-6|CAB54249.1|  119|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U28738-4|AAA68311.1|  119|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ...    25   9.7  
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ...    25   9.7  
AC024817-29|AAK68530.1|  280|Caenorhabditis elegans C-type lecti...    25   9.7  

>Z81094-4|CAB03152.1|  528|Caenorhabditis elegans Hypothetical
           protein F58G11.6 protein.
          Length = 528

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 260 TTARQFSRH-FVKWVDRSWSVGTNQSKQVGIVSRYQLFE 147
           T   Q + H +++  D  + +G + SKQ+ +VS Y LF+
Sbjct: 105 TVTTQRTEHVYIRTEDDQFILGVSISKQLSLVSDYPLFQ 143


>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +1

Query: 1    ARGQRSVHSRNTY---RPRSPVMLLLDLHHGLV 90
            A+  R V+    Y   RP +PV++L  LHHG V
Sbjct: 1586 AKFDRKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618


>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
            F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +1

Query: 1    ARGQRSVHSRNTY---RPRSPVMLLLDLHHGLV 90
            A+  R V+    Y   RP +PV++L  LHHG V
Sbjct: 1586 AKFDRKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618


>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
            protein F25F2.2 protein.
          Length = 4307

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +1

Query: 1    ARGQRSVHSRNTY---RPRSPVMLLLDLHHGLV 90
            A+  R V+    Y   RP +PV++L  LHHG V
Sbjct: 1586 AKFDRKVYQTTLYDSTRPGTPVLVLNALHHGTV 1618


>Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 39  PSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLL 185
           P+Q  GYA   P  W  +   PA   V   +     + +L  GD+   L
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQAL 371


>U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.
          Length = 550

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 39  PSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLL 185
           P+Q  GYA   P  W  +   PA   V   +     + +L  GD+   L
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQAL 371


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = +3

Query: 126 GDASWSLLKQLISGDYPDL-LTLVRTYRPRSINPLDEMPAKLSRCGHQRTAHFHVRRQTL 302
           G A W  L+ ++  DY D   +   + R     P     + L+     RT  F  ++QT 
Sbjct: 534 GPADWGKLEDIVKDDYSDSGDSCYSSRRGTGSQPTRPAASHLACQMQNRTQSFGAKQQTF 593

Query: 303 D--LPRTVPL 326
              LP TV L
Sbjct: 594 QNRLPPTVNL 603


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = +3

Query: 126 GDASWSLLKQLISGDYPDL-LTLVRTYRPRSINPLDEMPAKLSRCGHQRTAHFHVRRQTL 302
           G A W  L+ ++  DY D   +   + R     P     + L+     RT  F  ++QT 
Sbjct: 534 GPADWGKLEDIVKDDYSDSGDSCYSSRRGTGSQPTRPAASHLACQMQNRTQSFGAKQQTF 593

Query: 303 D--LPRTVPL 326
              LP TV L
Sbjct: 594 QNRLPPTVNL 603


>AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 25.8 bits (54), Expect = 7.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +3

Query: 39  PSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLL 185
           P+Q  GYA   P  W  +   PA   V   +     + +L  GD+   L
Sbjct: 323 PAQPVGYAPYAPAGWQLHYCFPADAEVNVYEKGVKRMDELEVGDWVQAL 371


>Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical
           protein F19H8.5 protein.
          Length = 514

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 48  VTGYAASGPTSWTSYLFSP 104
           VT Y +  PT +T Y+FSP
Sbjct: 349 VTVYTSLNPTVFTPYMFSP 367


>Z81083-6|CAB54249.1|  119|Caenorhabditis elegans Hypothetical
           protein F44F1.6b protein.
          Length = 119

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = -2

Query: 317 CPGKVKCLPSNVKMCCPLMTTARQFSRHFVKWVDR-------SWSVGTNQSKQVGIVSR 162
           C GK   +P     C P++T    F  + V W +        ++S  +N+ +QVG+ SR
Sbjct: 57  CQGKDTFVPHVCSACLPIITEKDLFPDYIV-WAEEIEDYVIFAFSSMSNKMEQVGLQSR 114


>U28738-4|AAA68311.1|  119|Caenorhabditis elegans Hypothetical
           protein T28D9.9 protein.
          Length = 119

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 272 CPLMTTARQFSRHFVKWVDRSWSVGTNQSKQVGIVSRYQLFE 147
           C LM T R   +H    + + W  G ++++     S + LFE
Sbjct: 33  CQLMETFRNARKHVNAKIRKCWKEGLSKAETEIKCSNWDLFE 74


>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 8, isoform a protein.
          Length = 1219

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 51  TGYAASGPTSWTSYLFSPASI-PVWSGDASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 227
           TG  A G  S   YL   + I    +G+ ++ +  QLI+G  P+L   +   +P   N L
Sbjct: 244 TGNVAGGYVS--HYLLETSRICRQAAGERNYHIFYQLIAGSSPELFKFLALGQPNQFNYL 301


>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 8, isoform b protein.
          Length = 1144

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 51  TGYAASGPTSWTSYLFSPASI-PVWSGDASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 227
           TG  A G  S   YL   + I    +G+ ++ +  QLI+G  P+L   +   +P   N L
Sbjct: 244 TGNVAGGYVS--HYLLETSRICRQAAGERNYHIFYQLIAGSSPELFKFLALGQPNQFNYL 301


>AC024817-29|AAK68530.1|  280|Caenorhabditis elegans C-type lectin
           protein 85 protein.
          Length = 280

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   TRAAFSSLSQYIPSQVTGYAASGPTSW--TSYLFSPAS 110
           T +  S  + Y  S  TGY ASG T +  +S   SPAS
Sbjct: 219 TDSPASGATDYPASGATGYPASGATGYPASSMTDSPAS 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,282,793
Number of Sequences: 27780
Number of extensions: 167449
Number of successful extensions: 443
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)