Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C09
(330 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54450.1 68416.m06024 proton-dependent oligopeptide transport... 30 0.33
At3g62010.1 68416.m06964 expressed protein 29 1.00
At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate aldol... 29 1.00
At3g21430.1 68416.m02704 expressed protein 28 1.3
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 28 1.3
At3g19830.1 68416.m02512 C2 domain-containing protein low simila... 28 1.7
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 27 2.3
At4g30350.1 68417.m04313 heat shock protein-related contains sim... 27 3.0
At1g08840.1 68414.m00984 DNA replication helicase, putative simi... 27 3.0
At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type pept... 27 4.0
At2g17010.1 68415.m01961 mechanosensitive ion channel domain-con... 27 4.0
At1g80040.2 68414.m09370 expressed protein 27 4.0
At1g80040.1 68414.m09369 expressed protein 27 4.0
At1g67420.1 68414.m07674 24 kDa vacuolar protein, putative simil... 26 5.3
At1g22570.1 68414.m02818 proton-dependent oligopeptide transport... 26 5.3
At1g22550.1 68414.m02816 proton-dependent oligopeptide transport... 26 5.3
At1g09190.1 68414.m01026 pentatricopeptide (PPR) repeat-containi... 26 5.3
At5g06510.2 68418.m00733 CCAAT-binding transcription factor (CBF... 26 7.0
At5g06510.1 68418.m00732 CCAAT-binding transcription factor (CBF... 26 7.0
At3g17740.1 68416.m02264 expressed protein 26 7.0
At2g21950.1 68415.m02608 SKP1 interacting partner 6 (SKIP6) iden... 26 7.0
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 26 7.0
At4g18760.1 68417.m02772 leucine-rich repeat family protein cont... 25 9.3
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 25 9.3
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ... 25 9.3
At1g07650.1 68414.m00821 leucine-rich repeat transmembrane prote... 25 9.3
>At3g54450.1 68416.m06024 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 488
Score = 30.3 bits (65), Expect = 0.33
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 85 LVICSLLRASRYGLATRHGVCSNS*YLETIPTCLLWFVP 201
+VIC L+ A R +A HG+ + E +P LW +P
Sbjct: 336 MVICGLVEAKRLKVARDHGLIDSP--KEVVPMSSLWLLP 372
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 28.7 bits (61), Expect = 1.00
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 156 LISGDYPDLLTLVR--TYRPRSINPLDEMPAKLSRCGHQRTAHFHVRRQTLDLPRT 317
L GDY D+L+L+R ++ P+S + +D + + GH R + ++ LP T
Sbjct: 1139 LSMGDYRDILSLIRVLSHGPQSKSDVDGIVELCAGAGHLREDIVYYSKELNKLPIT 1194
>At1g22410.1 68414.m02802 2-dehydro-3-deoxyphosphoheptonate
aldolase, putative / 3-deoxy-D-arabino-heptulosonate
7-phosphate synthase, putative / DAHP synthetase,
putative similar to 3-deoxy-D-arabino-heptulosonate
7-phosphate GI:170224 from [Nicotiana tabacum],
SP|P21357 from Solanum tuberosum; contains Pfam Class-II
DAHP synthetase family domain PF01474
Length = 527
Score = 28.7 bits (61), Expect = 1.00
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 21 SLSQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGD---ASWSLLKQLISGDYPDLLTL 191
S Q P +AS T+ + L P + V G SW K L DYPDL L
Sbjct: 38 SAVQTDPKTPAASSASAATTTPATLTKPVGVNVGKGKWAPESWRTKKALQQPDYPDLAAL 97
>At3g21430.1 68416.m02704 expressed protein
Length = 961
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 159 ISGDYPDL-LTLVRTYRPRSINPLDEMPAKLSRCGHQRTAHFHVR 290
I D P+L + V+ +NPL+ MPA L+R H +++H++
Sbjct: 557 IQFDNPELGVEFVKDTECMPLNPLENMPASLAR--HYAFSNYHIQ 599
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 27 SQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVRTYR 206
+++ ++ TG+ +S P + PA ++ S +L K+ D P L L +
Sbjct: 126 TKFSATKTTGFDSSSPAYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWS 185
Query: 207 PRS 215
PRS
Sbjct: 186 PRS 188
>At3g19830.1 68416.m02512 C2 domain-containing protein low
similarity to GLUT4 vesicle protein [Rattus norvegicus]
GI:4193489; contains Pfam profile PF00168: C2 domain
Length = 666
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 15 FSSLSQYIPSQVTGYAASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDL 182
F + +P + + G W P S P W G ASW+ L +L++ D P L
Sbjct: 296 FGIIPVVVPVGIRDFDIDGEL-WVKLRLIP-SAP-WVGAASWAFLTKLLTEDLPRL 348
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 48 VTGYAASGPTSWTSYLFSPASIP 116
+TG+A SGP + Y F P+S P
Sbjct: 93 MTGFATSGPPFSSPYTFVPSSYP 115
>At4g30350.1 68417.m04313 heat shock protein-related contains
similarity to heat shock protein 101 [Triticum aestivum]
gi|6013196|gb|AAF01280
Length = 924
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 177 DLLTLVRTYRPRSINPLDEMPAKLSRCGHQRTAHFHV 287
DL+T+ +T P + L++ A+ +R H T HV
Sbjct: 4 DLITIQQTLTPEAATVLNQSIAEATRRNHGHTTPLHV 40
>At1g08840.1 68414.m00984 DNA replication helicase, putative similar
to helicase [Xenopus laevis] gi|18845092|gb|AAL79550
Length = 1296
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +2
Query: 47 GHRLCCFWTYIMD*LFVLSCEHPGMVW-RRVMEFAQTADIWRLSRLAYFGSYLQTTIDQP 223
G RLCC + D VLS W ++V+E +T L F + Q I+ P
Sbjct: 1102 GDRLCCGSAEVADATLVLSTSSSTSPWLKKVLEPTRTVVFVNTDMLRAFEARDQNAINNP 1161
>At3g55520.1 68416.m06165 immunophilin, putative / FKBP-type
peptidyl-prolyl cis-trans isomerase, putative POSSIBLE
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE) (EC 5.2.1.8)
(PPIASE) (ROTAMASE) SP:P30416(Mouse);P59 PROTEIN (HSP
BINDING IMMUNOPHILIN), rabbit,
SWISSPROT:P27124:FKB4_RABBIT
Length = 190
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 159 ISGDYPDLLTLVRTYRPRSINPLDEMP 239
+SGD L +VR+ +P +I+P D++P
Sbjct: 7 LSGDGGVLKKIVRSAKPDAISPSDDLP 33
>At2g17010.1 68415.m01961 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 779
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 166 PDISCLSKLHDASPDHTGMLAGENK 92
P L LHD PDH+GM+ + K
Sbjct: 25 PSPEHLPILHDHHPDHSGMVVDDQK 49
>At1g80040.2 68414.m09370 expressed protein
Length = 180
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 63 ASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVR 197
+S P+S FSP++ P+WS S SL + + + +L LV+
Sbjct: 17 SSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVLVK 61
>At1g80040.1 68414.m09369 expressed protein
Length = 248
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 63 ASGPTSWTSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVR 197
+S P+S FSP++ P+WS S SL + + + +L LV+
Sbjct: 17 SSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIELTVLVK 61
>At1g67420.1 68414.m07674 24 kDa vacuolar protein, putative similar
to 24 kDa vacuolar protein VP24 [Ipomoea batatas]
gi|5821406|dbj|BAA83809
Length = 873
Score = 26.2 bits (55), Expect = 5.3
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 66 SGPTSWTSYLFSPASI 113
SGP SW SY++S A++
Sbjct: 239 SGPGSWPSYVYSQAAV 254
>At1g22570.1 68414.m02818 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 565
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 85 LVICSLLRASRYGLATRHGVCSNS*YLETIPTCLLWFVP 201
+++ +L+ + R +A HG+ T+P + WFVP
Sbjct: 423 MMLAALVESKRLKIAREHGLVDKPDV--TVPMSIWWFVP 459
>At1g22550.1 68414.m02816 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 564
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 85 LVICSLLRASRYGLATRHGVCSNS*YLETIPTCLLWFVP 201
+V+ +L+ R A HG+ TIP + WFVP
Sbjct: 419 MVVAALVEMKRLETAKEHGLVDRPD--ATIPMSIWWFVP 455
>At1g09190.1 68414.m01026 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 999
Score = 26.2 bits (55), Expect = 5.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 162 SGDYPDLLTLVRTYRPRSINPLDEMPAKLSRCGHQRTA 275
SGD L L + RSI + M + LS+CG R A
Sbjct: 696 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 733
>At5g06510.2 68418.m00733 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 269
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 84 TSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVR 197
T L SP P W+ S L + +SG+ D T V+
Sbjct: 3 TEELLSPPQTPWWNAFGSQPLTTESLSGEASDSFTGVK 40
>At5g06510.1 68418.m00732 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 269
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 84 TSYLFSPASIPVWSGDASWSLLKQLISGDYPDLLTLVR 197
T L SP P W+ S L + +SG+ D T V+
Sbjct: 3 TEELLSPPQTPWWNAFGSQPLTTESLSGEASDSFTGVK 40
>At3g17740.1 68416.m02264 expressed protein
Length = 1149
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -2
Query: 254 ARQFSRHFVKWVDRSWSVGTNQSKQVGIVSRYQLFEQ 144
ARQ R +K + +WS G + +V LFE+
Sbjct: 895 ARQGFREKLKKIQSTWSHGVTDDQSAALVCSAALFEE 931
>At2g21950.1 68415.m02608 SKP1 interacting partner 6 (SKIP6)
identical to SKP1 interacting partner 6 GI:10716957 from
[Arabidopsis thaliana]
Length = 372
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 99 SPAS-IPVWSGDASWSLLKQLISGDYPDLLTLVRTYRPRSINPL 227
SPA IP+ S D + S L ++ YP L + +T+R +PL
Sbjct: 16 SPAQLIPLLSEDVALSCLARVPRCHYPILSLVSKTFRSLPTSPL 59
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 324 AALSGEGQVFAVERENVLSV 265
AA SG+G V AV ENV+++
Sbjct: 543 AAFSGDGTVMAVAAENVITL 562
>At4g18760.1 68417.m02772 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 431
Score = 25.4 bits (53), Expect = 9.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 102 PASIPVWSGDASWSLLKQLISGDYPD 179
P SI + S S +L K ISGD PD
Sbjct: 229 PTSITLLSNLKSLNLSKNTISGDIPD 254
>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to X4 protein GI:21386798,
Y4 protein GI:21386800 from [Silene dioica]; contains
Pfam profiles PF00300: phosphoglycerate mutase family,
PF01535: PPR repeat
Length = 1053
Score = 25.4 bits (53), Expect = 9.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 305 VKCLPSNVKMCCPLMTTARQFSRHFVKWVDRSWSVGTNQSKQVGIVSRYQLFEQ 144
+KCL + + C P+MT V + SW G Q K++ + +LF++
Sbjct: 349 IKCLLTGILGCSPVMTHKICVEDSSVTVLQHSWRNGW-QIKRMNDTAHLRLFKK 401
>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
MAP3K epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1368
Score = 25.4 bits (53), Expect = 9.3
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 52 PVMLLLDLHHGLVICSLLRASRYGLATRHGVCSNS*YLETIPTCLLWFVPTDHDRSTHLT 231
P+M LLD+ VIC++L+ + N+ + IP ++ F + DRS +
Sbjct: 621 PLMDLLDIPKSRVICAVLQLINEIIKDNTDFQENACLVGLIPV-VMSFAGPERDRSREIR 679
Query: 232 K 234
K
Sbjct: 680 K 680
>At1g07650.1 68414.m00821 leucine-rich repeat transmembrane protein
kinase, putative similar to GB:AAC50043 from
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (4), 587-596
(1998))
Length = 1014
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 178 TCLLWFVPTDHDRSTHLTKCLLNC 249
TC L +P H + HL K +NC
Sbjct: 396 TCFLQRMPCVHPKRYHLYKLYINC 419
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,895,641
Number of Sequences: 28952
Number of extensions: 159111
Number of successful extensions: 425
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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