Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C08
         (353 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   0.92 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   0.92 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   1.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   1.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   1.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   6.5  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 RSRSF*YPPPETESVSVEQHPQTMYYI 206
           R R + YP P+ +    + HP +  YI
Sbjct: 346 RGRQYNYPNPQQQYYYNKNHPNSENYI 372


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 126 RSRSF*YPPPETESVSVEQHPQTMYYI 206
           R R + YP P+ +    + HP +  YI
Sbjct: 294 RGRQYNYPNPQQQYYYNKNHPNSENYI 320


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 187 GCCSTDTLSVSGGGY 143
           G CS  T++V G GY
Sbjct: 453 GSCSGKTITVGGDGY 467


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 187 GCCSTDTLSVSGGGY 143
           G CS  T++V G GY
Sbjct: 454 GSCSGKTITVGGDGY 468


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 187 GCCSTDTLSVSGGGY 143
           G CS  T++V G GY
Sbjct: 454 GSCSGKTITVGGDGY 468


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -1

Query: 155 WRRVLERSRSFSVCLDSSGLAEDHLTNAECGQAKANC 45
           WR   +R       L S G+  D L    C Q + NC
Sbjct: 554 WREAEQRILVQRERLISLGINSDALEPEWCWQNEENC 590


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,356
Number of Sequences: 336
Number of extensions: 1594
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)