Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C08
(353 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73424-6|CAI06058.1| 326|Caenorhabditis elegans Hypothetical pr... 29 0.71
U64833-10|AAB04821.2| 427|Caenorhabditis elegans Hypothetical p... 29 1.2
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 28 2.2
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 28 2.2
AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical... 27 2.8
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 27 3.8
AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock tr... 27 5.0
AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock tr... 27 5.0
AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical ... 27 5.0
U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine rece... 26 6.6
Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical pr... 26 8.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 26 8.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 26 8.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 26 8.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 26 8.7
>Z73424-6|CAI06058.1| 326|Caenorhabditis elegans Hypothetical
protein C44B9.6 protein.
Length = 326
Score = 29.5 bits (63), Expect = 0.71
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +1
Query: 211 ESVLKTNFY--TYPNAFKTLSELVAYFYLLLSKRVRLRVFAYN 333
+ +++ +FY T +A ++L+ + YFY+ +S ++ +F YN
Sbjct: 25 QDLVRISFYSKTAKHAVESLNMKLIYFYITISGTIQFDIFTYN 67
>U64833-10|AAB04821.2| 427|Caenorhabditis elegans Hypothetical
protein B0507.2 protein.
Length = 427
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 194 CLWVLFD*HAFSFWRRVLERSRSFSVCLDSSGLAEDHLTNAECGQAKANC 45
CL L D +F+ WRR L+ F + + L + L+ +CG+A C
Sbjct: 236 CLNNLPD-ESFARWRRYLQLKHHFYLAYAFAFLGQKQLSEDKCGEAVRAC 284
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 100 PDESRHTENDLDRSSTRRQKLKACQSNN 183
PDESR T R S R++KL S N
Sbjct: 454 PDESRATSTARSRESARKEKLATPDSKN 481
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 100 PDESRHTENDLDRSSTRRQKLKACQSNN 183
PDESR T R S R++KL S N
Sbjct: 454 PDESRATSTARSRESARKEKLATPDSKN 481
>AC024810-19|AAF60770.1| 427|Caenorhabditis elegans Hypothetical
protein Y54E10A.16a protein.
Length = 427
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 117 YRERSRSF*YPPPETESV-SVEQHPQTMYYILRECFKNK-FLHI 242
+ ER R+ Y E V +V Q P Y R CF +K F H+
Sbjct: 374 FNERERNKQYIKTEMNQVPNVNQEPYAYEYFFRRCFADKCFNHL 417
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 147 PPPETESVSVEQHPQTMYYILR-ECFKNK 230
PPP + ++++QH QT Y ++ E +NK
Sbjct: 81 PPPPQQILNLQQHYQTQYVLVPVEMLRNK 109
>AY559748-1|AAS72410.1| 671|Caenorhabditis elegans heat shock
transcription factor 1 protein.
Length = 671
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 87 SSDER*MWTSQGQLRQEAARTETSF 13
+ + R MWT G +RQ+ AR + F
Sbjct: 238 TKENRDMWTQMGSMRQQHARQQQYF 262
>AY559747-1|AAS72409.1| 671|Caenorhabditis elegans heat shock
transcription factor 1 protein.
Length = 671
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 87 SSDER*MWTSQGQLRQEAARTETSF 13
+ + R MWT G +RQ+ AR + F
Sbjct: 238 TKENRDMWTQMGSMRQQHARQQQYF 262
>AL033536-5|CAA22146.1| 671|Caenorhabditis elegans Hypothetical
protein Y53C10A.12 protein.
Length = 671
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 87 SSDER*MWTSQGQLRQEAARTETSF 13
+ + R MWT G +RQ+ AR + F
Sbjct: 238 TKENRDMWTQMGSMRQQHARQQQYF 262
>U29488-1|AAA68773.2| 338|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 31 protein.
Length = 338
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 211 ESVLKTNFYTYPNAFKTLSELVAYFYLLLSKRVRLRVFAYNFS 339
E ++++N Y Y N F +L + +F LLS + +FS
Sbjct: 101 ECLIESNLYYYTNLFSSLCCISLFFDRLLSLNAKTSYNTKHFS 143
>Z78537-2|CAB01720.2| 604|Caenorhabditis elegans Hypothetical
protein C09F12.2 protein.
Length = 604
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = -1
Query: 203 IIHCLWVLFD*HAFSF-WRRVLERSRSFSVCLD----SSGLAEDHL 81
I+HCLW++ +A + WR L R S + LD +GL HL
Sbjct: 131 ILHCLWIIAIINALRYTWR--LRRFASHEIRLDLVKNEAGLKMKHL 174
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 8 GENDVSVRAASCRNW--PWLVHIQRSSDDPQPD-QTSLDIQRTI*IVLVPAARN*KRVSR 178
GE+ VS R+ P V S DD P QTSL++ RTI V + R +R
Sbjct: 523 GEDSVSPRSGGSGGTGAPEEVDDDTSDDDDDPSVQTSLNVMRTIPTVNTTSNNGSNRSAR 582
Query: 179 TT 184
++
Sbjct: 583 SS 584
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 8 GENDVSVRAASCRNW--PWLVHIQRSSDDPQPD-QTSLDIQRTI*IVLVPAARN*KRVSR 178
GE+ VS R+ P V S DD P QTSL++ RTI V + R +R
Sbjct: 525 GEDSVSPRSGGSGGTGAPEEVDDDTSDDDDDPSVQTSLNVMRTIPTVNTTSNNGSNRSAR 584
Query: 179 TT 184
++
Sbjct: 585 SS 586
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 8 GENDVSVRAASCRNW--PWLVHIQRSSDDPQPD-QTSLDIQRTI*IVLVPAARN*KRVSR 178
GE+ VS R+ P V S DD P QTSL++ RTI V + R +R
Sbjct: 525 GEDSVSPRSGGSGGTGAPEEVDDDTSDDDDDPSVQTSLNVMRTIPTVNTTSNNGSNRSAR 584
Query: 179 TT 184
++
Sbjct: 585 SS 586
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +2
Query: 8 GENDVSVRAASCRNW--PWLVHIQRSSDDPQPD-QTSLDIQRTI*IVLVPAARN*KRVSR 178
GE+ VS R+ P V S DD P QTSL++ RTI V + R +R
Sbjct: 525 GEDSVSPRSGGSGGTGAPEEVDDDTSDDDDDPSVQTSLNVMRTIPTVNTTSNNGSNRSAR 584
Query: 179 TT 184
++
Sbjct: 585 SS 586
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,761,912
Number of Sequences: 27780
Number of extensions: 142734
Number of successful extensions: 378
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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