Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C07
(237 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 56 6e-10
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.082
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 0.14
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 28 0.14
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 27 0.33
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 1.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 1.0
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 25 1.0
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 25 1.3
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 25 1.8
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 24 2.3
SPCC1672.08c |tfa2||transcription factor TFIIE beta subunit Tfa2... 23 4.1
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 23 4.1
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 23 4.1
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 23 4.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 23 5.4
SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase family... 23 5.4
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 5.4
SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces... 23 7.1
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 23 7.1
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 23 7.1
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 23 7.1
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 23 7.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 22 9.4
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 22 9.4
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 22 9.4
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 22 9.4
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 22 9.4
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 56.0 bits (129), Expect = 6e-10
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 12/66 (18%)
Frame = +3
Query: 9 EDLELDDAVHTAILTLKEGFEGQMTADNIEV----------GICDASG--FRRLEPAHVK 152
++LELDDAVHTAIL LKE FEG++T DNIE+ GI G F RL + ++
Sbjct: 180 DELELDDAVHTAILALKETFEGELTEDNIEIAVVSTKPTDSGIVGVPGGHFCRLSQSEIR 239
Query: 153 DYLANI 170
DYL +
Sbjct: 240 DYLDQV 245
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.082
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = -1
Query: 135 PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P +G++LR+ P+ P P + HP+P PP
Sbjct: 801 PSTGSQLRNVVPVSIVTSGGRPALPDEMASPSSSIGHPLPSPP 843
Score = 26.6 bits (56), Expect = 0.44
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 84 PSSDPRTPPSASGSPCGQHHPVPDPPS 4
P+S P P S+SG+P PVP P S
Sbjct: 1046 PTSTPPVPKSSSGAPSAP-PPVPAPSS 1071
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 0.14
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 87 PPSSDPRTPPSASGS-PCGQHHPVPDPPS 4
PPS+ P PPSA S P G P PPS
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P+ P P++ + PP P + SA+ + P P PP
Sbjct: 268 PNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 23.4 bits (48), Expect = 4.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Frame = -1
Query: 159 DSPSREPVPVSGTRL-------RHKYPLRYYPPSSDPR-TPPSASGSPCGQHHPVPDPP 7
+S S+ P+P +R+ K P PPS R PP +GS P P PP
Sbjct: 285 NSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 0.14
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 162 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPD 13
++S S VPVS RL K R + PS T + S QH V D
Sbjct: 455 QNSSSAPSVPVSAPRLSGKSASRNHVPSPPKGTKSPMASSEQAQHQQVID 504
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 27.1 bits (57), Expect = 0.33
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -2
Query: 173 GYISEIVL-HVSRFQSPEPACVTNT----HFDIIRRHLTLEPLLQRQDRRVDSIIQFQIL 9
GY ++ H+S+ S V+N F ++ LEPL +QD+R+ + F +L
Sbjct: 31 GYFPHVITSHISKSSSQSHPDVSNAVLDETFSFMQEAKDLEPLTPKQDKRLRWKLYFTVL 90
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.4 bits (53), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -1
Query: 150 SREPVPVSGTRLRHK-YPLR---YYPPSSDPRTPPS 55
S++P+P RL K P R PPSS P PP+
Sbjct: 46 SKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPT 81
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 1.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 63 PPSASGSPCGQHHPVPDP 10
PP+ + +P +HHP P P
Sbjct: 731 PPTPAPTPAVKHHPPPPP 748
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.4 bits (53), Expect = 1.0
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 100 WVFVTQAGSGDWNRLT*RTISLIYPNVNLFLVLIKC 207
WV+VT DW+ + I + N F+++ KC
Sbjct: 118 WVYVTSTDDHDWHDIF--MIGYLISNAPWFILVSKC 151
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 25.0 bits (52), Expect = 1.3
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 110 TNTHFDIIRRHLTLEPLLQRQDRRVDS 30
+ ++FDI ++ L ++QRQ R +D+
Sbjct: 37 SESYFDITKKLHALSTVVQRQQREIDN 63
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 24.6 bits (51), Expect = 1.8
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 206 HFINTKNKLTLGYISEIVLHVSRFQSP 126
+FIN + KL YI+ LH QSP
Sbjct: 100 NFINRRAKLLNRYITRCALHPVLHQSP 126
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDP 10
PP + P PP P Q P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPCC1672.08c |tfa2||transcription factor TFIIE beta subunit
Tfa2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 285
Score = 23.4 bits (48), Expect = 4.1
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -2
Query: 113 VTNTHFDIIRRHLTLEP 63
+TNTH +I+R + +++P
Sbjct: 269 ITNTHLNILRDYSSMKP 285
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 23.4 bits (48), Expect = 4.1
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 162 RDSPSREPV-PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
R S S P+ P T+ H R P PR+ S+SG P PV PP+
Sbjct: 993 RSSTSIIPIKPNKPTKPDHLVAPRV-KPLLPPRSGSSSSGVPAPNLTPVNVPPT 1045
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 23.4 bits (48), Expect = 4.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 105 YPLRYYPPSSDP 70
+P R++PP SDP
Sbjct: 58 FPNRFHPPKSDP 69
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 23.4 bits (48), Expect = 4.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 131 SPEPACVTNTHFDIIRRHLTLEPLLQRQDRRVDSII 24
S E + N ++++R L+P LQRQ R ++SII
Sbjct: 138 SDEKKVLVNFVYNVLR----LDPDLQRQKRILESII 169
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.0 bits (47), Expect = 5.4
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = -1
Query: 150 SREPV-PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
S PV P S + P PP S P PPSA P G P P
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVP-PPPSAPPMPAGPPSAPPPP 1734
>SPBC1773.04 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 99 LRYYPPSSDPRTPPSASGSPC 37
L+Y+P D P+ SPC
Sbjct: 278 LKYFPQFKDKIAKPNGETSPC 298
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 87 PPSSDPRTPPSASGS 43
PPSS P PP+ S S
Sbjct: 126 PPSSSPLLPPNGSES 140
>SPCC970.08 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 967
Score = 22.6 bits (46), Expect = 7.1
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -1
Query: 138 VPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHP 22
+P + L Y P+S PR+ S+ S + HP
Sbjct: 261 LPDASFELERSVSRSYQSPASTPRSSVSSVSSSPPEDHP 299
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 72 PRTPPSASGSPCGQHHPVP 16
P +PPS+S +HHP P
Sbjct: 1243 PPSPPSSSVWNKREHHPKP 1261
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 22.6 bits (46), Expect = 7.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSP 40
PPS PRT S+ SP
Sbjct: 132 PPSLPPRTKSSSQSSP 147
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 22.6 bits (46), Expect = 7.1
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -1
Query: 162 RDSPSREPVPVS--GTRLRHKYPLRYYPPSSDP-RTPPSASGSPCGQHHPVPDPPS 4
+ PSR +P S K P + + P RTP S+S + H P PPS
Sbjct: 205 KSPPSRVKLPTSILSKSPPLKVPNKNRSSTFSPLRTPTSSSKTFVIVDHSTPSPPS 260
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 22.6 bits (46), Expect = 7.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPL------RYYPPSSDPRTPPSASG 46
+PS P SG P+ ++ PP + P+ PPS +G
Sbjct: 621 APSPNGTPTSGNSSTVGSPMIGYMAPQFIPPYAMPQFPPSGNG 663
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.2 bits (45), Expect = 9.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPP 7
PPS P + + + S ++P P PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPP 194
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 22.2 bits (45), Expect = 9.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -2
Query: 131 SPEPACVTNTHFDIIR----RHLTLEPLLQRQDRRVDSIIQFQI 12
+P P T+ H R R++ + PLL D + I QFQI
Sbjct: 331 TPAPPVKTSPHPASYRPQPTRNVEVRPLLMLDDVQSAQITQFQI 374
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 22.2 bits (45), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 155 VLHVSRFQSPEPAC 114
V+ ++RF P PAC
Sbjct: 499 VVELTRFSQPSPAC 512
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 22.2 bits (45), Expect = 9.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 159 DSPSREPVPVSGTRLRHKYPLRYYPPSSDP 70
DS S E +P PL+ PPS+ P
Sbjct: 531 DSNSTEGLPYQILSNATSIPLKQQPPSNSP 560
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 22.2 bits (45), Expect = 9.4
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -2
Query: 104 THFDIIRRHLTLEPLLQRQDRRVD 33
TH++ + +HL L+ L + R +
Sbjct: 17 THYESVGKHLVLKELFAKDSSRFE 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,465
Number of Sequences: 5004
Number of extensions: 17083
Number of successful extensions: 78
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 2,362,478
effective HSP length: 58
effective length of database: 2,072,246
effective search space used: 41444920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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