Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C07
         (237 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   0.22 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   0.89 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   1.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   1.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   2.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   3.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   3.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    19   6.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   6.2  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 0.22
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 90  YPPSSDPRTPPSASG 46
           YPP SDP  P   SG
Sbjct: 659 YPPDSDPPPPDDISG 673


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 0.89
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 203 FINTKNKLTLGYISEIV 153
           ++  K+  TLGYIS ++
Sbjct: 446 YVKVKHSATLGYISRVL 462


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 81  SSDPRTPPSASGSPCGQHHPVPDPP 7
           S+D R P  A   P  Q   V  PP
Sbjct: 881 STDSRNPALALAEPYNQRGTVVSPP 905


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 1.2
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 81  SSDPRTPPSASGSPCGQHHPVPDPP 7
           S+D R P  A   P  Q   V  PP
Sbjct: 919 STDSRNPALALAEPYNQRGTVVSPP 943


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 12/37 (32%), Positives = 15/37 (40%)
 Frame = -1

Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS 43
           PS    P +  R     P +  PP   P  PPS + S
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPS 61



 Score = 19.8 bits (39), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 87  PPSSDPRTPPSASGSPCGQHHPVPDPP 7
           PPS+    PP  + S      P+P+ P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMP 436


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 87  PPSSDPRTPPSASGSP 40
           PP   P  PP +S  P
Sbjct: 338 PPKPAPPPPPPSSSGP 353


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -1

Query: 102 PLRYYPPSSDP-RTP 61
           P +YY  S DP RTP
Sbjct: 411 PAKYYLKSRDPERTP 425


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 93  YYPPSSDPRTPPS 55
           YY   S   TPPS
Sbjct: 529 YYDSKSSTETPPS 541


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 87  PPSSDPRTPPSASGSP 40
           PPS    +PP   G+P
Sbjct: 130 PPSVSLSSPPREPGTP 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,217
Number of Sequences: 438
Number of extensions: 1456
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)