Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C07
(237 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 73 4e-14
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 72 6e-14
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 36 0.004
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 33 0.027
At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger) fa... 31 0.081
At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative si... 31 0.11
At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 31 0.14
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 0.19
At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transfera... 30 0.19
At4g33660.1 68417.m04781 expressed protein 30 0.25
At3g04820.1 68416.m00522 expressed protein contains PFam profile... 30 0.25
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 29 0.33
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 29 0.33
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 0.33
At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 0.33
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 29 0.43
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 0.43
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 0.57
At1g49750.1 68414.m05579 leucine-rich repeat family protein cont... 29 0.57
At4g34440.1 68417.m04894 protein kinase family protein contains ... 28 0.76
At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) / ... 28 0.76
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 28 0.76
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 28 0.76
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 28 0.76
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si... 28 1.0
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 28 1.0
At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing ... 28 1.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 1.0
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 28 1.0
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 28 1.0
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 28 1.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 1.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 1.0
At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containi... 27 1.3
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 1.3
At2g40820.1 68415.m05038 proline-rich family protein contains pr... 27 1.3
At4g28750.1 68417.m04111 photosystem I reaction center subunit I... 27 1.7
At4g23882.1 68417.m03434 heavy-metal-associated domain-containin... 27 1.7
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 27 1.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 1.7
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 27 1.7
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 1.7
At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family... 27 2.3
At2g31150.1 68415.m03803 expressed protein 27 2.3
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 2.3
At1g23540.1 68414.m02960 protein kinase family protein contains ... 27 2.3
At5g41100.2 68418.m04997 expressed protein 26 3.1
At5g41100.1 68418.m04996 expressed protein 26 3.1
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 26 3.1
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 26 3.1
At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp... 26 3.1
At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp... 26 3.1
At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp... 26 3.1
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 26 3.1
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 26 3.1
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 26 3.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 26 3.1
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 26 3.1
At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family... 26 4.0
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 26 4.0
At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family pr... 26 4.0
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa... 26 4.0
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 26 4.0
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 26 4.0
At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger) fa... 25 5.3
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 25 5.3
At3g53330.1 68416.m05884 plastocyanin-like domain-containing pro... 25 5.3
At3g18810.1 68416.m02389 protein kinase family protein contains ... 25 5.3
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 25 5.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 25 5.3
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 25 5.3
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 25 7.1
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 25 7.1
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 25 7.1
At5g28290.1 68418.m03434 protein kinase, putative similar to LST... 25 7.1
At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein ... 25 7.1
At5g17650.1 68418.m02069 glycine/proline-rich protein glycine/pr... 25 7.1
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 25 7.1
At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 25 7.1
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 25 7.1
At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit (... 25 7.1
At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family... 25 7.1
At3g43583.1 68416.m04636 hypothetical protein 25 7.1
At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family... 25 7.1
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 25 7.1
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 25 7.1
At1g26150.1 68414.m03192 protein kinase family protein similar t... 25 7.1
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 25 9.3
At4g39680.1 68417.m05614 SAP domain-containing protein contains ... 25 9.3
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 25 9.3
At3g54220.1 68416.m05993 scarecrow transcription factor, putativ... 25 9.3
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 25 9.3
At3g11960.2 68416.m01476 cleavage and polyadenylation specificit... 25 9.3
At3g11960.1 68416.m01475 cleavage and polyadenylation specificit... 25 9.3
At2g42380.2 68415.m05245 bZIP transcription factor family protein 25 9.3
At2g42380.1 68415.m05244 bZIP transcription factor family protein 25 9.3
At2g38770.1 68415.m04760 expressed protein 25 9.3
At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transfera... 25 9.3
At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family... 25 9.3
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 25 9.3
At1g12810.1 68414.m01488 proline-rich family protein contains pr... 25 9.3
At1g03910.1 68414.m00376 expressed protein low similarity to cac... 25 9.3
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 72.5 bits (170), Expect = 4e-14
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +3
Query: 9 EDLELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG-FRRLEPAHVKDYLANI 170
ED+ELDDA+HTAILTLKEGFEG++++ NIE+G A FR L PA + DYLA +
Sbjct: 180 EDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDYLAEV 234
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 71.7 bits (168), Expect = 6e-14
Identities = 34/55 (61%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +3
Query: 9 EDLELDDAVHTAILTLKEGFEGQMTADNIEVG-ICDASGFRRLEPAHVKDYLANI 170
ED+ELDDA+HTAILTLKEGFEG++++ NIE+G I FR L PA + DYLA +
Sbjct: 180 EDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDYLAEV 234
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 35.9 bits (79), Expect = 0.004
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 147 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
R P P + YP Y PPSS+P PP + ++P P PP
Sbjct: 7 RYPYPYGQYPYPYPYPAPYRPPSSEP-YPPPPTNQYSAPYYPYPPPP 52
Score = 29.9 bits (64), Expect = 0.25
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH 28
PS EP P T ++ P YPP PP AS P QH
Sbjct: 28 PSSEPYPPPPTN-QYSAPYYPYPPPPYATPPPYASPPPPHQH 68
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 33.1 bits (72), Expect = 0.027
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
PS +PV G P PP P+ PP+ S SPC P P P
Sbjct: 18 PSSKPVAPPGPS-----PCPSPPPKPQPKPPPAPSPSPCPSPPPKPQP 60
Score = 28.3 bits (60), Expect = 0.76
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
+PS P P + + K P+ PP + P TPP P P P PP
Sbjct: 45 APSPSPCPSPPPKPQPK-PV---PPPACPPTPPKPQPKPAPPPEPKPAPP 90
Score = 27.1 bits (57), Expect = 1.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 84 PSSDPRTPPSASGSPCGQHHPVPDPP 7
PSS P PP S P P P PP
Sbjct: 18 PSSKPVAPPGPSPCPSPPPKPQPKPP 43
Score = 24.6 bits (51), Expect = 9.3
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYP-PSSDPRTPPSASGSPCGQHHPVPDP 10
P +P P + P P P P PP+ + P H P P P
Sbjct: 73 PKPQPKPAPPPEPKPAPPPAPKPVPCPSPPKPPAPTPKPVPPHGPPPKP 121
>At5g19080.1 68418.m02268 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 378
Score = 31.5 bits (68), Expect = 0.081
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1
Query: 195 HQKQINIRVY*RDSPSREPVPVSGTRLRHKYPLRYYPPS--SDPRTPPSASGSPCGQ 31
H N Y D P ++P P +G H YP+ S P PPS+S P Q
Sbjct: 17 HHPHHNPPYYYSDPPPQQPPPQNGYSYSHNYPVSTPQLSLPPPPAQPPSSSQPPPSQ 73
>At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative
similar to SP|O94761 ATP-dependent DNA helicase Q4
(RecQ4) {Homo sapiens}; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 911
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
+P R+ P S +L+ P ++ PP S T S+ P HP P+P
Sbjct: 15 TPPRDSFPSSPPQLQS--PAKHVPPVSRKMTSSSSRSKPKAPTHPPPNP 61
>At3g10720.2 68416.m01291 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 619
Score = 30.7 bits (66), Expect = 0.14
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -1
Query: 159 DSPSREPV--PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPSC 1
+ PS+ P PV P + PPS P PPS S SP P P C
Sbjct: 38 EPPSQLPFEPPVESPFFPPSQPPIFVPPSQPPSLPPSQSQSPSLACKSTPYPKLC 92
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 30.3 bits (65), Expect = 0.19
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
SP P PVS Y PP +P PP PC ++ P P PP
Sbjct: 590 SPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPP-----PCIEYSPPPPPP 634
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P Y PP P PP SP P P PP
Sbjct: 477 PPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = -1
Query: 111 HKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPSC 1
H P YP S P P S P + P PP C
Sbjct: 579 HSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPC 615
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P Y PP P PP SP P P PP
Sbjct: 446 PPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPP 7
P S P PPS + +P P P PP
Sbjct: 516 PVYSSPPPPPSPAPTPVYCTRPPPPPP 542
>At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 30.3 bits (65), Expect = 0.19
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 57 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 158
K+ F+G + A+ G+ + F+ LEPA+ KDY
Sbjct: 207 KDIFDGMVEANETSYGVI-VNSFQELEPAYAKDY 239
>At4g33660.1 68417.m04781 expressed protein
Length = 76
Score = 29.9 bits (64), Expect = 0.25
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 108 KYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
KY Y P + P+ PP G P Q++P P PP
Sbjct: 5 KYAYPYPAPGNYPQGPPPPVGVP-PQYYPPPPPP 37
>At3g04820.1 68416.m00522 expressed protein contains PFam profile
PF01142: Uncharacterized protein family UPF0024;
expression supported by MPSS
Length = 747
Score = 29.9 bits (64), Expect = 0.25
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 39 TAILTLKEGFEGQMTADNIEVGI-CDAS---GFRRLEPAHVKDYLAN 167
T I T+ FEG T D +VGI C S GFR + D++ N
Sbjct: 25 TKIATIATNFEGMKTVDEADVGISCFISQLPGFRGILKQRYADFIVN 71
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 29.5 bits (63), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVPDPP 7
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P P
Sbjct: 151 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPPAYP 198
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 29.5 bits (63), Expect = 0.33
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVPDPP 7
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P P
Sbjct: 207 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPPAYP 254
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 29.5 bits (63), Expect = 0.33
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Frame = -1
Query: 135 PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPC-----GQHHPVPDPP 7
PV+ T H + R PP P PP P G HH P PP
Sbjct: 136 PVTTTTAGHHHHRRSPPPPPPPPPPPPTITPPVTTTTTGHHHHRPPPP 183
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 6/55 (10%)
Frame = -1
Query: 153 PSREPVPVSG-TRLRHKYPLRYYPPSSDPRTPPSASGSP-----CGQHHPVPDPP 7
P P P+S T H + R PP P PP P G HH PP
Sbjct: 98 PPPPPPPLSAITTTGHHHHRRSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPP 152
>At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 491
Score = 29.5 bits (63), Expect = 0.33
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 57 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 158
K+ +G DN G+ + F LEPA+V+DY
Sbjct: 203 KDFLDGMTEGDNTSYGVI-VNTFEELEPAYVRDY 235
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 29.1 bits (62), Expect = 0.43
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 24 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDYLANI 170
D+ V TAI L+ + A IEVG+ A FR L ++++L I
Sbjct: 192 DETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAI 242
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 0.43
Identities = 20/50 (40%), Positives = 22/50 (44%)
Frame = -1
Query: 159 DSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
DSP R P PV+ RLR R PS + R P P Q P P P
Sbjct: 422 DSPGRSPSPVA--RLRDPTGARLPSPSIEQRLP----SPPVAQRLPSPPP 465
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.7 bits (61), Expect = 0.57
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPP---------SASGSPCGQHH-PVPDPP 7
SP P PV+ + P+ Y+PP+S ++PP + SP HH P PP
Sbjct: 737 SPVYYP-PVTQSPPPPSTPVEYHPPASPNQSPPPEYQSPPPKGCNDSPSNDHHYQTPTPP 795
Query: 6 S 4
S
Sbjct: 796 S 796
Score = 25.8 bits (54), Expect = 4.0
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 105 YPLRYYPPSSDPRTPPSASG-SPCGQHHPVPDPPS 4
YP PP +P PP +S SP + +P P P S
Sbjct: 500 YPPPPPPPEYEPSPPPPSSEMSPSVRAYPPPPPLS 534
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -1
Query: 93 YYPPSSDPRTPPSASGSPCGQHHPVPDP 10
YYPP + PP P Q P P P
Sbjct: 696 YYPPVTQSPPPPPVYYLPVTQSPPPPSP 723
>At1g49750.1 68414.m05579 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560
Length = 494
Score = 28.7 bits (61), Expect = 0.57
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
SPS EP P P PP S P PP S P +P PP
Sbjct: 49 SPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLPPPP 98
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 28.3 bits (60), Expect = 0.76
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRH-KYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
SPS P V+ + + P P S P TPP+ +P Q P PPS
Sbjct: 71 SPSSSPPVVANPSPQTPENPSPPAPEGSTPVTPPAPPQTPSNQSPERPTPPS 122
>At4g25110.1 68417.m03612 latex-abundant family protein (AMC2) /
caspase family protein contains similarity to
latex-abundant protein [Hevea brasiliensis] gb:AAD13216;
contains Pfam profile PF00656: ICE-like protease
(caspase) p20 domain
Length = 418
Score = 28.3 bits (60), Expect = 0.76
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 141 PVPVSGTRLRHK-YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P P T H P + PP S P T + SP P P PP
Sbjct: 66 PTPSPYTHAPHAPSPFNHAPPDSYPFTHAPPASSPFNHAPPGPPPP 111
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 28.3 bits (60), Expect = 0.76
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 147 REPVPVSGTRLRHK--YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
++P P SG + Y ++ YPP+ + PP+ S +P Q + P P
Sbjct: 327 QQPPPSSGYNPEEQPPYQMQSYPPNPPRQQPPAGS-TPSQQFYNPPQP 373
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 28.3 bits (60), Expect = 0.76
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 24 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDYLANI 170
D+ V TAI L+ + A IEVG+ A FR L + ++L I
Sbjct: 192 DETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTAI 242
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 28.3 bits (60), Expect = 0.76
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P+ P PVS R + P PSS R P++ + P+ PP+
Sbjct: 472 PASNPFPVSQPR-PNSQPFSMSQPSSTARPFPASQPPAASKSFPISQPPT 520
>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:6714534 from [Salix
gilgiana]
Length = 380
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYP-LRYYP-PSSDP-RTPPSASGSPCGQHHPVPDP 10
SPS E P+ + P + Y+P PS P + S PC +HP P P
Sbjct: 230 SPSPETSPIHSSIGSPSPPTIPYFPEPSQSPMESNQGISLPPCLPYHPAPSP 281
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 27.9 bits (59), Expect = 1.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P YPP PPS SG P P PPS
Sbjct: 186 PASGYPPQPSAYPPPSTSGYPPIPSAYPPPPPS 218
>At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing
protein identical to H-protein promoter binding
factor-2a GI:3386546 from [Arabidopsis thaliana]
Length = 448
Score = 27.9 bits (59), Expect = 1.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 105 YPLRYYPPSSDPRTPPSASGSPCGQ 31
YP+ +YP + P PP S SP Q
Sbjct: 314 YPMPFYPYWTIPMLPPHQSSSPISQ 338
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 4/55 (7%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHP----VPDPPS 4
+PS P P T P PPS P +PP + P Q P P PPS
Sbjct: 39 TPSSPP-PSPSTNSTSPPPSSPLPPSLPPPSPPGSLTPPLPQPSPSAPITPSPPS 92
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P +S TPP A+ SP P PPS
Sbjct: 19 PTNSTTTTPPPAASSPPPTTTPSSPPPS 46
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
PP P +PP S P P P PPS
Sbjct: 64 PPPPPPTSPPPPSPPPPSPPPPSPPPPS 91
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P S P +PP S P P P PP+
Sbjct: 69 PTSPPPPSPPPPSPPPPSPPPPSPPPPA 96
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 57 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 158
KE E + AD G+ + F+ LEPA+ KD+
Sbjct: 207 KEILEDMVEADKTSYGVI-VNSFQELEPAYAKDF 239
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPL-RYYPPSSDPRT-PPSASGSPCGQHHPVPDPPS 4
SP +P PV HK P Y PP P PP+ + SP Q PV PP+
Sbjct: 450 SPPVKPPPV------HKPPTPTYSPPIKPPPVKPPTPTYSPPVQPPPVQKPPT 496
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 111 HKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
H + + PP+S P T P +P H P P S
Sbjct: 440 HHHVVHSPPPASSPPTSPPVHSTPSPVHKPQPPKES 475
Score = 25.0 bits (52), Expect = 7.1
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHK-YPLRYYPPSSDP--RTPPSASGSP----CGQHHPVPDPP 7
+PS+ P PV TR HK P + P +DP ++P SP HH V PP
Sbjct: 393 TPSKSPSPVP-TRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQPHHHVVHSPP 448
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P+ P+P S TRL P P S P PP P PVP PP
Sbjct: 699 PAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPP-----PPLSKTPVPPPP 742
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P R P P P PP P P S Q P P PP
Sbjct: 596 PPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPP 644
>At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 534
Score = 27.5 bits (58), Expect = 1.3
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 218 NYIIHFINTKNKLTLGYI-SEIVLHVSRFQSPEPACVTNTHFDIIRRHLTLEPLLQRQDR 42
N+I H K+KL + S + L + R P T FD + HL EP L+ R
Sbjct: 50 NWITHLQYVKSKLPRSTLTSPVFLQILRETRKCPK-TTLDFFDFAKTHLRFEPDLKSHCR 108
Query: 41 RVDSIIQFQILPR 3
++ + +L R
Sbjct: 109 VIEVAAESGLLER 121
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -1
Query: 150 SREPVPVSGTRLRHKYPLRYY----PPSSDPRTPPSASGSPCGQHHPVPDP 10
S +P P L P +Y PP + +PP S PC ++ P P P
Sbjct: 712 SPQPPPPPHYSLPPPTPTYHYISPPPPPTPIHSPPPQSHPPCIEYSPPPPP 762
>At2g40820.1 68415.m05038 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 903
Score = 27.5 bits (58), Expect = 1.3
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 159 DSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASG 46
DS P P++ T + + P YYPP P PP SG
Sbjct: 786 DSSMPNP-PMNNTNPQMQQP--YYPPPMQPAPPPMNSG 820
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 135 PVSGTRLRHKYPLRYYPPSSDPRTPPSASG 46
P++ T + + P YYPP P PP SG
Sbjct: 747 PMTNTNPQMQQP--YYPPPMQPPPPPMNSG 774
>At4g28750.1 68417.m04111 photosystem I reaction center subunit IV,
chloroplast, putative / PSI-E, putative (PSAE1)
identical to SP|Q9S831; similar to SP|P12354 Photosystem
I reaction center subunit IV, chloroplast precursor
(PSI-E) {Spinacia oleracea}; contains Pfam profile
PF02427: Photosystem I reaction centre subunit IV / PsaE
Length = 143
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 162 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
R S S P+ +G+RL + P SS + P+A+ +P G P PP
Sbjct: 26 RSSVSFLPMRNAGSRLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPP 77
>At4g23882.1 68417.m03434 heavy-metal-associated domain-containing
protein
Length = 284
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 102 PLRYYPPSSDP-RTPPSASGSPCGQHHPVPDPP 7
P+ Y PPS P R PP +G+ Q P PP
Sbjct: 238 PIPYPPPSFFPGRPPPPYTGAGMFQSAPPQSPP 270
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 141 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSP 40
P+P++GT P YYP + PPS+S P
Sbjct: 36 PLPIAGTGSTQ--PAGYYPQPTGYYPPPSSSNVP 67
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
SPS P P S + P P S P +PP S SP P P PPS
Sbjct: 33 SPSLSPSPPSSS------PSSAPPSSLSPSSPPPLSLSPSS---PPPPPPS 74
Score = 27.1 bits (57), Expect = 1.7
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
SPS P P S + P P S P +PP S SP P P PPS
Sbjct: 82 SPSLSPSPPSSS------PSSAPPSSLSPSSPPPLSLSPSS---PPPPPPS 123
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPP 7
PPS + +PPS P P P PP
Sbjct: 159 PPSPESPSPPSPEPPPPSSLEPPPPPP 185
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = -1
Query: 141 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P P + + P PP + P +PP + P P P P S
Sbjct: 60 PPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPSPPQPQPPPQS 105
>At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 147
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P P S P PP +S G ++ P PPS
Sbjct: 41 PCNPVPSSYSPPPPPPSSSGGGGSYYYSPPPPS 73
>At2g31150.1 68415.m03803 expressed protein
Length = 309
Score = 26.6 bits (56), Expect = 2.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -1
Query: 162 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDP 70
RD P EP P S P Y P S+P
Sbjct: 216 RDEPEYEPEPESAAEYDEPEPEAEYEPESEP 246
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 26.6 bits (56), Expect = 2.3
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
+PS PV S P Y PP P PP P H P PP
Sbjct: 26 APSSPPVYTSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPV--HKPTLSPP 73
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 26.6 bits (56), Expect = 2.3
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRY--YPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P P P G PL+ PP+SDP P A SP +P P PS
Sbjct: 134 PPSSPSPNVGPTNPESPPLQSPPAPPASDPTNSPPA--SPLDPTNPPPIQPS 183
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
PP +D PPS S SP P P PP+
Sbjct: 72 PPLTDSPPPPSDS-SPPVDSTPSPPPPT 98
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSP-CGQHHPVPDP 10
PPS D ++PP +S SP G +P P
Sbjct: 125 PPSQDLQSPPPSSPSPNVGPTNPESPP 151
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -1
Query: 141 PVPVSGTRLRHKYPLRYYPPSSDPR-----TPPSASGSPCGQHHPVPDPP 7
P+ S TRL P+ SS PR +PP AS + H +P PP
Sbjct: 418 PLKPSSTRL--PVPVAVQAQSSSPRISPTASPPLASSPRINELHELPRPP 465
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 26.2 bits (55), Expect = 3.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -1
Query: 141 PVPVSGTRLRHKYPLRYYPPSSDPR-----TPPSASGSPCGQHHPVPDPP 7
P+ S TRL P+ SS PR +PP AS + H +P PP
Sbjct: 418 PLKPSSTRL--PVPVAVQAQSSSPRISPTASPPLASSPRINELHELPRPP 465
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 26.2 bits (55), Expect = 3.1
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRT-PPSASGSPCGQHHPVPDPPS 4
SP P+ + L P +PP P + PP SP P P PPS
Sbjct: 1078 SPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPPPLSPPPSPPPPPPPPS 1129
Score = 25.8 bits (54), Expect = 4.0
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P P P+ P PPSS P PP+A P P PP
Sbjct: 1065 PQESPPPLPPLPPSPPPPSPPLPPSSLPPPPPAALFPPLPPPPSQPPPP 1113
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
PL + P S P PPS+ P P PP
Sbjct: 1127 PLPHESPPSPPPQPPSSPPPPSSPPQLAPAPP 1158
>At4g31200.3 68417.m04431 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 114 RHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
R+K+ L +PP P PP S S HHP P+P
Sbjct: 171 RYKHFLSMHPPGG-PFDPPFPSSSMPMIHHP-PNP 203
>At4g31200.2 68417.m04430 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 114 RHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
R+K+ L +PP P PP S S HHP P+P
Sbjct: 171 RYKHFLSMHPPGG-PFDPPFPSSSMPMIHHP-PNP 203
>At4g31200.1 68417.m04429 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein related to DAN26 [Homo
sapiens] gi|1770394|emb|CAA69591
Length = 650
Score = 26.2 bits (55), Expect = 3.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -1
Query: 114 RHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
R+K+ L +PP P PP S S HHP P+P
Sbjct: 171 RYKHFLSMHPPGG-PFDPPFPSSSMPMIHHP-PNP 203
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -1
Query: 114 RHKYPLRYYP-PSSD-PRT--PPSASGSPCGQHHPVPDPPS 4
+H P R+Y P++D P PP S P H P P PS
Sbjct: 212 QHPLPPRFYDNPTNDYPADVPPPPPSSYPSNDHLPPPTGPS 252
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -1
Query: 87 PPSSDPR--TPPSASGSPCGQHHPVPDPPS 4
PP DP+ TPP+ +P P P P S
Sbjct: 46 PPQPDPQPPTPPTFQPAPPANDQPPPPPQS 75
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P Y PP P TPP + P P PP+
Sbjct: 125 PTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPPT 157
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P+ +P P T H P PP P T P P P PPS
Sbjct: 77 PTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPS 126
Score = 25.4 bits (53), Expect = 5.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P+ +P P + HK P PP + TPP +P PV PP+
Sbjct: 142 PTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVV--TPPTPTPPVITPPT 189
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 159 DSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 16
+SP+ P P L P + PP P++ P S SP +H+P P
Sbjct: 48 NSPAPSPEPEDYLPLPP--PPQTPPPPPPPQSLPPPSPSPEPEHYPPP 93
>At5g55750.1 68418.m06949 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 175
Score = 25.8 bits (54), Expect = 4.0
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = -1
Query: 135 PVSGTRLRHKYPLRYYPPSS---DPRTPPSASGSPCGQHHPVPDPPSC 1
P RL+ P PP S P PPS S P + PVP C
Sbjct: 50 PSCKPRLQRYSPYGNPPPPSPQYSPPPPPSQSSPPRSRCPPVPTTGCC 97
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = -1
Query: 105 YPLRYYPPS---SDPRTPPSASGSPCGQHHPVPDPPS 4
YP + YPP+ P PP S ++ P PPS
Sbjct: 358 YPQQSYPPNPPRQPPSHPPPGSAPSQQYYNAPPTPPS 394
>At3g23210.1 68416.m02926 basic helix-loop-helix (bHLH) family
protein similar to hypothetical protein GB:CAB10220 from
[Arabidopsis thaliana]
Length = 320
Score = 25.8 bits (54), Expect = 4.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTP 61
PS+ P ++ YP YYPP+ +P
Sbjct: 271 PSQHPAAFHSHKMAVAYPYGYYPPNMPMWSP 301
>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
family protein similar to C-terminal zinc-finger
[Glycine max] GI:558543; contains Pfam profile: PF00097
zinc finger, C3HC4 type (RING finger)
Length = 486
Score = 25.8 bits (54), Expect = 4.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -1
Query: 96 RYYPPSSDPRTPPSA-SGSPCGQHHPVPDPP 7
RY+ SS PS + HHPVP PP
Sbjct: 256 RYHETSSSRNPTPSVYQRNHYISHHPVPPPP 286
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 25.8 bits (54), Expect = 4.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
PPSS P TP + P G P P P+
Sbjct: 137 PPSSTPGTPTTPESPPSG-GSPTPTTPT 163
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 25.8 bits (54), Expect = 4.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 84 PSSDPRTPPSASGSPCGQ 31
P SDP P + G PCG+
Sbjct: 301 PPSDPYLTPHSCGEPCGK 318
>At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 532
Score = 25.4 bits (53), Expect = 5.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -2
Query: 149 HVSRFQSPEPACVTNTHFDIIRRHLTLEPLLQR 51
H + +QSP P C +++ + + L P L+R
Sbjct: 484 HHTTYQSPPPPCTESSYVEAAMKDLHQLPWLER 516
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 25.4 bits (53), Expect = 5.3
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -1
Query: 84 PSSDPRTPPSASGSPCGQHHPVPD-PPS 4
PSS P TP + S P P P PPS
Sbjct: 138 PSSPPSTPSTPSSPPSPPSPPSPSLPPS 165
>At3g53330.1 68416.m05884 plastocyanin-like domain-containing
protein similar to mavicyanin SP:P80728 from [Cucurbita
pepo]
Length = 310
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
P + P PPS + P + P P PPS
Sbjct: 152 PNTPPPPPPPSKTHEPSRRITPSPPPPS 179
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 25.4 bits (53), Expect = 5.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 87 PPSSDPRTPPSASGS 43
PPSSD ++PPS G+
Sbjct: 56 PPSSDSQSPPSPQGN 70
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
PP P PP + P H PV PP+
Sbjct: 36 PPVVPPSFPPPMAPIPMMPHPPVARPPT 63
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 25.4 bits (53), Expect = 5.3
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 153 PSREPVPVSGTRLRHKYPLRYYP-PSSDPRTPPSASGSP 40
P + P P S + K P +++P P++ P P + + SP
Sbjct: 143 PEQLPPPASSPQGGPKKPKKHHPGPATSPPAPSAPATSP 181
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 25.4 bits (53), Expect = 5.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 78 SDPRTPPSASGSPCGQHHPVPDPPS 4
S P PPS+ SP + + P PPS
Sbjct: 405 SSPPPPPSSKMSPTVRAYSPPPPPS 429
Score = 25.4 bits (53), Expect = 5.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -1
Query: 93 YYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
YYPP + PPS P Q P P PPS
Sbjct: 589 YYPPVTYSPPPPSPVYYP--QVTPSPPPPS 616
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 93 YYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
YYPP ++ PPS P + P P P
Sbjct: 574 YYPPVTNSPPPPSPVYYPPVTYSPPPPSP 602
Score = 24.6 bits (51), Expect = 9.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 72 PRTPPSASGSPCGQHHPVPDPPS 4
P PP + SP + +P P PPS
Sbjct: 441 PPPPPYSKMSPSVRAYPPPPPPS 463
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 150 SREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
S P PV ++ P PP P PP SG P P P P
Sbjct: 368 SAPPPPVPAPQM----PSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGP 411
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 150 SREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
S P PV ++ P PP P PP SG P P P P
Sbjct: 368 SAPPPPVPAPQM----PSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGP 411
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDP 10
PP S P PP SP H P P P
Sbjct: 36 PPFSPPHHPPPPHFSP--PHQPPPSP 59
>At5g28290.1 68418.m03434 protein kinase, putative similar to
LSTK-1-like kinase [Lycopersicon esculentum]
GI:15637110; contains Pfam profile: PF00069 Eukaryotic
protein kinase domain
Length = 568
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 138 VPVSGTRL-RHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
V V+ R+ R K+PL Y GS G + P P+PP
Sbjct: 412 VSVNSPRIDRIKFPLASYEEMPFIPVVRKKKGSSRGSYSPPPEPP 456
>At5g18550.1 68418.m02193 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 456
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 69 RTPPSASGSPCGQHHPVP 16
RT GS C HHPVP
Sbjct: 147 RTGQCKFGSTCRYHHPVP 164
>At5g17650.1 68418.m02069 glycine/proline-rich protein
glycine/proline-rich protein GPRP - Arabidopsis
thaliana, EMBL:X84315
Length = 173
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -1
Query: 111 HKYPLRY-YPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
H Y Y YPP P P + P G + P PP+
Sbjct: 37 HGYGSSYPYPPPPPPHGYPPVAYPPHGGYPPAGYPPA 73
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 108 KYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
K P R PP S PR PPS C + V PP
Sbjct: 588 KSPSRIRPPPSIPR-PPSRPRYACCRIPAVNPPP 620
>At5g04970.1 68418.m00526 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 624
Score = 25.0 bits (52), Expect = 7.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 156 SPSREPV-PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPS 4
SP+R P P S ++ PPS P PP+ S P P PPS
Sbjct: 23 SPTRPPSQPPSHPPIQPSSQPPTQPPSQPPTQPPTQPPSHPPTQPPTP-PPS 73
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 147 REPVPVSGTRLRHKYPLRYY-PPSSDPRTPPSASGSPCGQ-HHPVPDP 10
++P P ++ H P+ Y PP + PP P + HP P P
Sbjct: 243 KKPCPPKPPKIEHPPPVPVYKPPPKIEKPPPVPVYKPPPKIEHPPPVP 290
>At4g18780.1 68417.m02774 cellulose synthase, catalytic subunit
(IRX1) nearly identical to gi:12836997
Length = 985
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -1
Query: 141 PVPV-SGTRLRHKYPLRYYPPSSDPRTPPSASGSPC 37
PV V +GT R + Y PPS PR P +S S C
Sbjct: 536 PVYVGTGTVFRRQALYGYSPPSK-PRILPQSSSSSC 570
>At3g50570.1 68416.m05531 hydroxyproline-rich glycoprotein family
protein contains proline-rich protein domains,
INTERPRO:IPR000694
Length = 189
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 81 SSDPRTPPSASGS 43
SSDP TPPS GS
Sbjct: 53 SSDPNTPPSPPGS 65
>At3g43583.1 68416.m04636 hypothetical protein
Length = 100
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -1
Query: 129 SGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPPSC 1
S R K P PPS +P P SP P P PP C
Sbjct: 18 SNHRPPEKPPSPEPPPSPEPPPSPEKPTSPEQPSSPEP-PPHC 59
>At3g26910.1 68416.m03367 hydroxyproline-rich glycoprotein family
protein common family member:At2g33490 [Arabidopsis
thaliana]
Length = 608
Score = 25.0 bits (52), Expect = 7.1
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -1
Query: 162 RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 16
R SP+ P P S RL + L P P PP + SP H P
Sbjct: 474 RVSPTASPPPASSPRLNELHELPRPPGHFAP--PPRRAKSPGLVGHSAP 520
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 159 DSPSREPVPVSGTRLRHKYPLRYYP-PSSDPRTPPSASGSPCGQHHPVPDPP 7
+SP EP P + + P + P P P+ P +P + P P PP
Sbjct: 521 ESPKPEP-PKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPP 571
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPP 7
PP P P S S G PVP PP
Sbjct: 663 PPVPPPPAPAPLSRSHNGNIPPVPGPP 689
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPD-PPS 4
PP+ P T P S SP P P+ PPS
Sbjct: 128 PPTEAPPTTPITSPSPPTNPPPPPESPPS 156
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 24.6 bits (51), Expect = 9.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -1
Query: 156 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
SPS P P P PS+ P T PSAS S P P
Sbjct: 660 SPSTSP-PAGHLGSPSDTPSSVVTPSASPSTSPSASPSVSPSAFPSASP 707
>At4g39680.1 68417.m05614 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 633
Score = 24.6 bits (51), Expect = 9.3
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -1
Query: 141 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPP 7
P+P L PP++ P PP A + P+P PP
Sbjct: 542 PLPPQPQHQPQAQTLSRPPPTALPPPPPLAKPPHVVERLPLPPPP 586
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 102 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
PL+ P S P PP+A+ P P P P
Sbjct: 255 PLKLPPGRSAPPPPPAAAPPPQPPPPPPPKP 285
>At3g54220.1 68416.m05993 scarecrow transcription factor, putative
nearly identical to SCARECROW [Arabidopsis thaliana]
GI:1497987
Length = 653
Score = 24.6 bits (51), Expect = 9.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPP 7
PP S RT S S S + P P PP
Sbjct: 13 PPHSPLRTTSSGSSSSNNRGPPPPPPP 39
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHHPVPDPPS 4
PP + +T P G P G H P P P+
Sbjct: 39 PPQTQQQTYPPVMGYP-GYHQPPPPYPN 65
>At3g11960.2 68416.m01476 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to Splicing factor 3B subunit 3
(Spliceosome associatedprotein 130) (SAP 130) (SF3b130)
(Pre-mRNA splicing factor SF3b 130kDa subunit)
(SP:Q15393) [Homo sapiens]; contains Pfam PF03178 :
CPSF A subunit region
Length = 1329
Score = 24.6 bits (51), Expect = 9.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHH 25
P ++ P PPS+S S G H+
Sbjct: 16 PATAAPTPPPSSSPSSAGDHY 36
>At3g11960.1 68416.m01475 cleavage and polyadenylation specificity
factor (CPSF) A subunit C-terminal domain-containing
protein similar to Splicing factor 3B subunit 3
(Spliceosome associatedprotein 130) (SAP 130) (SF3b130)
(Pre-mRNA splicing factor SF3b 130kDa subunit)
(SP:Q15393) [Homo sapiens]; contains Pfam PF03178 :
CPSF A subunit region
Length = 1379
Score = 24.6 bits (51), Expect = 9.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 87 PPSSDPRTPPSASGSPCGQHH 25
P ++ P PPS+S S G H+
Sbjct: 16 PATAAPTPPPSSSPSSAGDHY 36
>At2g42380.2 68415.m05245 bZIP transcription factor family protein
Length = 321
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 81 TADNIEVGICDASGFRRLEPAHVKDYLAN 167
TA N G D+SG R L+P VK LAN
Sbjct: 170 TASNNNSG--DSSGNRILDPKRVKRILAN 196
>At2g42380.1 68415.m05244 bZIP transcription factor family protein
Length = 310
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +3
Query: 81 TADNIEVGICDASGFRRLEPAHVKDYLAN 167
TA N G D+SG R L+P VK LAN
Sbjct: 170 TASNNNSG--DSSGNRILDPKRVKRILAN 196
>At2g38770.1 68415.m04760 expressed protein
Length = 1509
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 218 NYIIHFINTKNKLTLGYISEIVLHVSRFQS 129
NY++ IN L ++EIVL ++ QS
Sbjct: 180 NYLVFMINAFQSLEDAVVNEIVLSLAGLQS 209
>At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 496
Score = 24.6 bits (51), Expect = 9.3
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +3
Query: 123 FRRLEPAHVKDY 158
F+ LEPA+VKDY
Sbjct: 229 FQELEPAYVKDY 240
>At2g02490.1 68415.m00188 hydroxyproline-rich glycoprotein family
protein related to LENOD2 [Lupinus luteus]
gi|296830|emb|CAA39050; and genefinder
Length = 302
Score = 24.6 bits (51), Expect = 9.3
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = -1
Query: 195 HQKQINIRVY*RDSPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 16
HQ +I++ Y P PVP S L+H PP + + S + PC P P
Sbjct: 150 HQNEISVNQYPHILPISHPVPPS---LKH-------PPHQNAKI--SMNQYPCVFPIPHP 197
Query: 15 DPPS 4
PPS
Sbjct: 198 VPPS 201
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2
Query: 188 NKLTLGYISEIVLHVSRFQSPEPACVTNTHFDIIRRHLTLEPLL-QRQDRRVDSIIQ 21
+ L L +++++ V Q + N H+ + R+ LT+E + Q +D D II+
Sbjct: 66 HNLRLARVTDLLRTVVDHQPGKKTHCLNLHYKLKRKELTMEEFMRQLRDLVGDQIIR 122
>At1g12810.1 68414.m01488 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 129
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -1
Query: 105 YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 10
Y Y PP PP SP H P P
Sbjct: 16 YQSHYPPPGYPSAPPPPGYPSPPSHHEGYPPP 47
>At1g03910.1 68414.m00376 expressed protein low similarity to cactin
[Drosophila melanogaster] GI:7673675; expression
supported by MPSS
Length = 672
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 119 ACVTNTHFDIIRRHL-TLEPLLQRQD 45
AC+ H +++RRHL LE L + +D
Sbjct: 385 ACLKEIHAEMLRRHLHRLEQLSEGED 410
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,087,076
Number of Sequences: 28952
Number of extensions: 104102
Number of successful extensions: 807
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,070,560
effective HSP length: 57
effective length of database: 10,420,296
effective search space used: 218826216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -