Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C06
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.7  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   3.6  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    22   3.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   8.2  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   8.2  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   8.2  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   8.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.2  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 58  KGSLRRCWS 32
           KGS+ RCWS
Sbjct: 209 KGSIARCWS 217


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 324 HLLLKKLPEVSERLRASMKASNVMQDEDVE 413
           HLL +   +  E L+A  +   ++ D DVE
Sbjct: 148 HLLFRHFSQRQEVLQAFKQVQLLVSDSDVE 177


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 324 HLLLKKLPEVSERLRASMKASNVMQDEDVE 413
           HLL +   +  E L+A  +   ++ D DVE
Sbjct: 116 HLLFRHFSQRQEVLQAFKQVQLLVSDSDVE 145


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 36  QQRRKDPLSKKKLRERRQNAHQNTSRSR 119
           + R+KD   +K   E+ +   + TSR R
Sbjct: 11  EYRKKDRQYEKLYNEKEKFLEEKTSRKR 38


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 36  QQRRKDPLSKKKLRERRQNAHQNTSRSR 119
           + R+KD   +K   E+ +   + TSR R
Sbjct: 11  EYRKKDRQYEKLYNEKEKFLEEKTSRKR 38


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 36  QQRRKDPLSKKKLRERRQNAHQNTSRSR 119
           + R+KD   +K   E+ +   + TSR R
Sbjct: 11  EYRKKDRQYEKLYNEKEKFLEEKTSRKR 38


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 36  QQRRKDPLSKKKLRERRQNAHQNTSRSR 119
           + R+KD   +K   E+ +   + TSR R
Sbjct: 11  EYRKKDRQYEKLYNEKEKFLEEKTSRKR 38


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 293 APTNNASADLPSSLEEASRS 352
           AP   ASA+LPS L    RS
Sbjct: 247 APQGAASANLPSPLYPWMRS 266


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 273  FDHRQQQPDRGAPLQPLDHR*PITLHQAESV 181
            F H Q Q    A LQ +       LH A+SV
Sbjct: 918  FPHHQIQVSTSAGLQTIRLSGHSVLHSAQSV 948


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 131 STQCTRSRSILVSILSTLSQLL 66
           ++QC ++ S+L S  STL++ L
Sbjct: 689 ASQCPQTASLLSSTHSTLARSL 710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,046
Number of Sequences: 438
Number of extensions: 2290
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)