Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C05
         (403 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGH3 Cluster: Protease inhibitor 5; n=1; Lonomia obli...    44   9e-04
UniRef50_A5CUF4 Cluster: Putative penicillin-binding protein; n=...    32   3.7  

>UniRef50_Q5MGH3 Cluster: Protease inhibitor 5; n=1; Lonomia
           obliqua|Rep: Protease inhibitor 5 - Lonomia obliqua
           (Moth)
          Length = 86

 Score = 44.4 bits (100), Expect = 9e-04
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +1

Query: 133 RSSHSYPKHTCDCWCKPGTYRVIDTNDCV 219
           RS+H+Y +H CDCWC PG  R   T  CV
Sbjct: 50  RSAHTYRRHYCDCWCNPGFIRDTVTGACV 78


>UniRef50_A5CUF4 Cluster: Putative penicillin-binding protein; n=1;
           Clavibacter michiganensis subsp. michiganensis NCPPB
           382|Rep: Putative penicillin-binding protein -
           Clavibacter michiganensis subsp. michiganensis (strain
           NCPPB 382)
          Length = 460

 Score = 32.3 bits (70), Expect = 3.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 65  VKCRSDEYTPGSQLWTRTNMRTLVAHIRTRSILAIAGVNQELTE 196
           V  R+DEY   S     +  RT++ H+ TR++ A  GV    +E
Sbjct: 199 VPARADEYAAASTSLRTSRERTVLPHVDTRAMAAATGVTSTASE 242


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,338,317
Number of Sequences: 1657284
Number of extensions: 5344495
Number of successful extensions: 11078
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11078
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)