Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C05
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    25   1.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   3.2  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   7.3  
AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocas...    22   7.3  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    22   9.6  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 169 CWCKPGTYRVIDTNDCVTLEHC 234
           C+CKP   R  D   C+   +C
Sbjct: 172 CFCKPSYIRSSDGGPCIPTNNC 193


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 72   HFT-SAFTKIMRHSKINLVPNSC 7
            HFT S+  K+MR + +NL   SC
Sbjct: 1974 HFTYSSHGKVMREALVNLTRESC 1996


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 81  SLRHFTSAFTKIMRHSKINLVPNSCS 4
           SL+H+ +AF      + + L P+ CS
Sbjct: 720 SLQHYLNAFVHWCSSNLLRLCPDKCS 745


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 169 CWCKPGTYRVIDTNDCVTLEHCH*PT 246
           C CK G  R     +CV ++  + PT
Sbjct: 58  CVCKKGFVRETQFGNCVPVDTTYNPT 83


>AY227001-1|AAO32818.2|  301|Anopheles gambiae ADP/ATP translocase
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 118 QHAHXRSSHSYPKHTCDCWCKPG 186
           Q    +S   Y K+T DCW K G
Sbjct: 243 QSGRAKSEVMY-KNTLDCWVKIG 264


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 169 CWCKPGTYRVIDTNDCV 219
           C+CKPG  R      C+
Sbjct: 70  CFCKPGFVRESKEGKCI 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,671
Number of Sequences: 2352
Number of extensions: 5885
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)