Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_C04
(420 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 113 1e-24
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 103 2e-21
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 100 1e-20
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 97 1e-19
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 96 2e-19
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 93 2e-18
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 90 2e-17
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 88 8e-17
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 84 1e-15
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 82 4e-15
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 82 4e-15
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 79 3e-14
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 79 4e-14
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 78 8e-14
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 77 1e-13
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 76 3e-13
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 75 4e-13
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 75 4e-13
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 70 2e-11
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 69 5e-11
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 69 5e-11
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 69 5e-11
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 66 3e-10
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 64 1e-09
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 61 1e-08
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 58 5e-08
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 56 3e-07
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 53 3e-06
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 48 8e-05
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 47 1e-04
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 44 0.001
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 43 0.002
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 42 0.004
UniRef50_Q11RL8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A5Z5Y7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q8IBF2 Cluster: Putative uncharacterized protein MAL7P1... 31 9.5
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 113 bits (273), Expect = 1e-24
Identities = 57/120 (47%), Positives = 74/120 (61%)
Frame = +3
Query: 60 MRSVTVKDVNKTKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRCAAI 239
M VTVKDVN+ + + + + + LAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 240 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 419
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQALE LK+VEK QDGG
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 103 bits (246), Expect = 2e-21
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAP D DW+YVR A++ R +YIRSP GV + +++G KR GVTP+HF ++SGS+ RKAL
Sbjct: 46 LAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGSNKRRGVTPNHFAKASGSVIRKAL 105
Query: 372 QALEALKLVEKVQDG 416
Q LEA+K VEK DG
Sbjct: 106 QTLEAIKWVEKHPDG 120
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 100 bits (240), Expect = 1e-20
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = +3
Query: 183 AXXLAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIAR 362
A LAPY+PDWFYVRCAAILRH+YIR P G+ + K F +KRNGV PSH + GS+ R
Sbjct: 42 ANQLAPYNPDWFYVRCAAILRHLYIR-PTGLTGLCKAFSRKKRNGVKPSHRSLAHGSVIR 100
Query: 363 KALQALEALKLVEKVQDGG 419
KA+Q +EAL L +K + GG
Sbjct: 101 KAIQQMEALGLCQKREGGG 119
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 97.5 bits (232), Expect = 1e-19
Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Frame = +3
Query: 72 TVKDVNKTKSSKLYR-HLK-DRK*RFQSY-GLGKDSSFQWAXXLAPYDPDWFYVRCAAIL 242
TVKDVN + K Y HLK K + + K + F+ L PYDPDW+Y R A+I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFK---ELPPYDPDWYYTRAASIA 64
Query: 243 RHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 419
R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GG
Sbjct: 65 RKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGG 123
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 96.3 bits (229), Expect = 2e-19
Identities = 50/120 (41%), Positives = 67/120 (55%)
Frame = +3
Query: 60 MRSVTVKDVNKTKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRCAAI 239
M V+VKDV+ K Y R + + LAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 240 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 419
RHIY+R VGV + K++GG G+ PSH SGS+ RK +Q+LE + ++EK +GG
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGG 120
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 93.1 bits (221), Expect = 2e-18
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RNG P HFC+SSG+I+R L
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNIL 127
Query: 372 QALEALKLVEKVQDGG 419
Q L+ + +++ GG
Sbjct: 128 QQLQKMGIIDVDPKGG 143
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 89.8 bits (213), Expect = 2e-17
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Frame = +3
Query: 42 HEAQGKMRSVTVKDVNKTKSSKLY-RHLKDRK*RFQS---YGLGKDSSFQWAXXLAPYDP 209
++ + +R VTV+DV + K Y HLK R + + + + K +SF+ +P DP
Sbjct: 4 YDEEEVVRGVTVRDVKPAEFIKAYAEHLK-RSGKIELPAWWDVVKTASFK---EYSPADP 59
Query: 210 DWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEAL 389
DW+Y+R A+I R +Y+R GV ++ K++GG R GV HF ++SG + R LQ LE +
Sbjct: 60 DWYYIRAASIARKVYLRQYTGVGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEM 119
Query: 390 KLVEKVQDG 416
K+VEK +G
Sbjct: 120 KVVEKCPEG 128
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 87.8 bits (208), Expect = 8e-17
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +3
Query: 183 AXXLAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIAR 362
A LAP DPDWFY+R AA+LRH+Y GV + K++ +KRNG P+H CR+SG I R
Sbjct: 64 AKELAPQDPDWFYIRAAAVLRHLYFHPDSGVDRLRKVYSSKKRNGSAPNHTCRASGKILR 123
Query: 363 KALQALEALKLVEK 404
+Q LE++ +E+
Sbjct: 124 TIVQQLESIGFLEQ 137
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 83.8 bits (198), Expect = 1e-15
Identities = 38/76 (50%), Positives = 49/76 (64%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAPYDPDW Y+R A+I R +YIR +G KI+G RKR G+ P +SSG + R +L
Sbjct: 52 LAPYDPDWLYIRIASIARKLYIRGGIGTGEFRKIYGDRKRRGMKPCRSSKSSGGLIRYSL 111
Query: 372 QALEALKLVEKVQDGG 419
Q LE L + EK + GG
Sbjct: 112 QQLEKLGVAEKDERGG 127
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 82.2 bits (194), Expect = 4e-15
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +3
Query: 183 AXXLAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIAR 362
A LAP DP WFY+R AAILRH+Y G+ + +++ RKR G P+H C +SG I R
Sbjct: 64 AKELAPQDPKWFYIRSAAILRHLYFHPDEGIGRLRRVYASRKRRGCAPNHTCPASGKIIR 123
Query: 363 KALQALEALKLVEKVQD 413
+Q LEA +EK +D
Sbjct: 124 TIVQQLEANGFLEKSKD 140
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 82.2 bits (194), Expect = 4e-15
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P DPDW+Y+R A+ILR +Y+ PVGV + +GGR+ G P F + SG+I RK LQ
Sbjct: 45 PEDPDWWYMRAASILRRVYMDGPVGVSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQ 104
Query: 378 LEALKLVEKVQDG 416
LE LVEK ++G
Sbjct: 105 LEEAGLVEKTEEG 117
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/73 (47%), Positives = 50/73 (68%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P +PDW+YVR AA+LR +YI PVGV ++ +GG+K G P F R SG+I R+ALQ
Sbjct: 45 PENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQ 104
Query: 378 LEALKLVEKVQDG 416
LE L+++ ++G
Sbjct: 105 LEESGLIKREENG 117
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 79.0 bits (186), Expect = 4e-14
Identities = 36/74 (48%), Positives = 46/74 (62%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P DW+Y R A+ILR +YI PVG++ + +GGRK G P F ++ GSI RKALQ
Sbjct: 45 PEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQ 104
Query: 378 LEALKLVEKVQDGG 419
LEA +EKV G
Sbjct: 105 LEAAGFIEKVPGKG 118
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 77.8 bits (183), Expect = 8e-14
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
L P D DW+YVR AA+ RHIY+R VGV + K+ G K G P+H +SGS+ RK +
Sbjct: 119 LPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTKNRGSRPNHHVDASGSVDRKII 178
Query: 372 QALEALKLVEKVQDGG 419
Q+LE + ++E ++ G
Sbjct: 179 QSLEKIGVLEYDEEKG 194
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 77.4 bits (182), Expect = 1e-13
Identities = 32/69 (46%), Positives = 46/69 (66%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
+ P DPDW++ R AA+LR +Y+ P+GV+ + +GG K G P+ F + SGS+ RKAL
Sbjct: 43 MPPEDPDWWFTRAAAVLRRVYVDGPLGVERMRSFYGGSKNRGSKPNAFRKGSGSVLRKAL 102
Query: 372 QALEALKLV 398
Q LEA L+
Sbjct: 103 QQLEAAGLI 111
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 76.2 bits (179), Expect = 3e-13
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 195 APYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQ 374
+P DW+Y+R A+I R +YI PVG++ + +GGRKR G P F + SG+I R AL
Sbjct: 42 SPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALH 101
Query: 375 ALEALKLVEKVQDG 416
LE L V+K ++G
Sbjct: 102 QLEQLGFVKKTREG 115
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 75.4 bits (177), Expect = 4e-13
Identities = 40/112 (35%), Positives = 57/112 (50%)
Frame = +3
Query: 66 SVTVKDVNKTKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRCAAILR 245
+VT+KDV + Y + R Q + L P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 246 HIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVE 401
+YIR GV T ++FGG +RNGV P+HF +G R L+ L+ LK++E
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIE 116
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 75.4 bits (177), Expect = 4e-13
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIR-SPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQ 374
P D DW+YVR A+ILR +Y P+G++T I+GGR+ G P HF ++ GS+ RK LQ
Sbjct: 46 PTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQ 105
Query: 375 ALEALKLVEKVQDGG 419
LE LV KV G
Sbjct: 106 QLEEAGLVVKVPGRG 120
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 69.7 bits (163), Expect = 2e-11
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Frame = +3
Query: 54 GKMRSVTVKDVNKTKSSKLY-RHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
GK + T+KDV+ + K RH K F + AP +PDW+Y+RC
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVP-NCTEIMKSSHGRERAPQNPDWYYIRC 82
Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
AA+LR IY+R VG ++K FG +K G P H SS A ++L L LVE
Sbjct: 83 AAVLRAIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGA 142
Query: 411 DGG 419
G
Sbjct: 143 QSG 145
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 68.5 bits (160), Expect = 5e-11
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
L P + DW Y+R A+ILRH+Y+R VGV ++K +G ++RNG +H +S I R L
Sbjct: 58 LPPQNSDWLYIRAASILRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYCL 117
Query: 372 QALEALKLVE 401
L++L LVE
Sbjct: 118 IQLQSLGLVE 127
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 68.5 bits (160), Expect = 5e-11
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P + DW++ RCA+I+R IY+ P+G+ + K +GG K +G +H + G+I R A+
Sbjct: 44 PQNRDWWHTRCASIMRKIYLHGPIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHG 103
Query: 378 LEALKLVEKVQDGG 419
LE L +EKV+ G
Sbjct: 104 LEKLGYLEKVEKKG 117
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 68.5 bits (160), Expect = 5e-11
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAP +PDW Y+R AAI R +Y+ + +GV + + +G + PSH SG + R L
Sbjct: 46 LAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYIL 105
Query: 372 QALEALKLVEKVQDG 416
Q LE + +V K+Q G
Sbjct: 106 QQLEKMGIVGKIQSG 120
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 66.1 bits (154), Expect = 3e-10
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAP D DW++++ ++ILR +YI +GV + + F ++R GV P+H +SG I R L
Sbjct: 89 LAPLDEDWYFIKTSSILRRLYIHPDIGVGFLRRQFSYKQRRGVAPNHTSLASGKILRSIL 148
Query: 372 QALEALKLVEK 404
Q LE + VE+
Sbjct: 149 QQLENIGYVEQ 159
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 63.7 bits (148), Expect = 1e-09
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 TVKDVNKTKSSKLYR-HLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRCAAILRH 248
TVKDV + Y HLK + + ++ A LAP D DW Y+R AA+ R
Sbjct: 9 TVKDVAAADFIREYASHLKKAN-KLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARK 67
Query: 249 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEK 404
+Y++ G+ T+ IFG K G + G I R AL++LE LK++ K
Sbjct: 68 VYLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRK 119
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 60.9 bits (141), Expect = 1e-08
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P D W++ RCA+++R IY+ P+G+ + +GG K G ++ ++ G+I R A+
Sbjct: 38 PQDRAWWHTRCASLMRKIYLHGPIGINGLRSEYGGGKPRGYGAANHRKAGGAIIRNAVHG 97
Query: 378 LEALKLVEKVQDGG 419
LE L +EK+ G
Sbjct: 98 LEKLGYIEKLDKKG 111
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 58.4 bits (135), Expect = 5e-08
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +3
Query: 153 GLGKDSSFQWAXXLAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSH 332
GLGK++S P D DW YVR AA+ R IY+R GV +T +FG NG S
Sbjct: 92 GLGKETS--------PIDQDWMYVRAAALARKIYVRGHWGVGNLTHMFGSVNDNGKHES- 142
Query: 333 FCRSSGSIARKALQALEALKLVEK 404
SG + R LQ LE +K+++K
Sbjct: 143 ---GSGKVIRYLLQQLETIKVLKK 163
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 56.0 bits (129), Expect = 3e-07
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +3
Query: 198 PYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQA 377
P DW YVR A++LR +YI +G+ ++ +GG+ G H S SI R
Sbjct: 45 PLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHE 104
Query: 378 LEALKLVEKVQDG 416
LE+ LV+K Q G
Sbjct: 105 LESAGLVQKTQKG 117
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 52.8 bits (121), Expect = 3e-06
Identities = 34/76 (44%), Positives = 39/76 (51%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAPY+ +WFY R A+ RH V PSHF R S S A + L
Sbjct: 190 LAPYEENWFYTRAASTARH----------------------RVRPSHFSRGSKSAACRVL 227
Query: 372 QALEALKLVEKVQDGG 419
QALE LK+VEK QDGG
Sbjct: 228 QALEGLKMVEKDQDGG 243
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 48.0 bits (109), Expect = 8e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 371
LAP + +W+Y+R AA+ R IY+ + + +G + P H +S + R L
Sbjct: 52 LAPANNNWWYIRAAAVTRQIYLHHDASLSGLAFHYGANMKAVTMPKHHHEASRKVIRTIL 111
Query: 372 QALEALKLVEKVQDG 416
Q LE LV + G
Sbjct: 112 QQLEKAGLVRVAEKG 126
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 47.2 bits (107), Expect = 1e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 300 GRKRNGVTPSHFCRSSGSIARKALQALEALK 392
GR+RNGV PSHF R S ++AR+ LQALE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +3
Query: 195 APYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQ 374
+P +W + R A+I+ YI +G + + +I+ G+K+ S SG I R +++
Sbjct: 45 SPNQSNWIFKRMASIIIKFYIYKKLGTRQLVRIYNGKKKG--RRSKKTNGSGKIIRFSIK 102
Query: 375 ALEALKLVEKVQDG 416
LE +K+++K + G
Sbjct: 103 ELEKMKILKKDESG 116
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 43.2 bits (97), Expect = 0.002
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +3
Query: 192 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN----GVTPSHFCRSSGSIA 359
L P D++YVR A++LR + P+G++ + +G +KR V P S +
Sbjct: 53 LPPEQEDFWYVRSASLLRKVAQNEPIGIERLATEYGSKKRGSNRYSVRPGEHEGGSRKLI 112
Query: 360 RKALQALEALKLV 398
R +LQALE LV
Sbjct: 113 RASLQALEEDGLV 125
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 42.3 bits (95), Expect = 0.004
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = -2
Query: 419 AAILNLLYQLQRFKSLESFTSNTAR*SAEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQ 240
AAIL L + Q + LE +T SAEV G D ++ + + N + ++ V +
Sbjct: 38 AAILVLFHHFQPLQGLEDPAGHTLGASAEVAGHDAVSLTSPIDLGHGANPSATPEVQVPR 97
Query: 239 YSSTAYIKPIRVIGSQ 192
S++ ++P+ ++GS+
Sbjct: 98 CGSSSRVEPVLIVGSK 113
>UniRef50_Q11RL8 Cluster: Putative uncharacterized protein; n=1;
Cytophaga hutchinsonii ATCC 33406|Rep: Putative
uncharacterized protein - Cytophaga hutchinsonii (strain
ATCC 33406 / NCIMB 9469)
Length = 524
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 144 QSYGLGKDSSFQWAXXLAPYDPDWFYVRCAAILRHIYI 257
QS G GK+ + +W L DW Y RC +++++Y+
Sbjct: 58 QSPGYGKNWASEWIQVLI-VKADWNYTRCIVLIKNVYL 94
>UniRef50_A5Z5Y7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 517
Score = 31.5 bits (68), Expect = 7.2
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -2
Query: 362 TSNTAR*SAEVRGCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKPIRVIG 198
T ++ R S DTI + S + + DIDV QY T I P G
Sbjct: 206 TDDSKRSSVSTTNVDTIVYKVVTEASQMATAIQTGDIDVAQYMDTTAIDPFYANG 260
>UniRef50_Q8IBF2 Cluster: Putative uncharacterized protein
MAL7P1.171; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL7P1.171 - Plasmodium
falciparum (isolate 3D7)
Length = 2110
Score = 31.1 bits (67), Expect = 9.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 326 GCDTIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKPIR 207
G + +ATTKNF NSN I+ Y++ +Y+ +
Sbjct: 427 GVNNTTYATTKNFVSEFNSNYDDGINKGSYTTKSYVSEFK 466
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,630,384
Number of Sequences: 1657284
Number of extensions: 7278870
Number of successful extensions: 19009
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 18605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19004
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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