Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C04
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   0.69 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   0.91 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   4.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.4  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   6.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   6.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   6.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    20   8.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   8.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    20   8.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 296 KNFSDSLNSNRRADID 249
           KNF+DS  SNR  +ID
Sbjct: 415 KNFNDSPESNRSNEID 430


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.4 bits (48), Expect = 0.91
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 417 RHLEPSLPTSTLQELGELYEQYCQ 346
           RH E +     ++ELG ++  YC+
Sbjct: 290 RHPESNPSERVMRELGRIFRAYCR 313


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 367 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 254
           +L +I+ +   K  G T +R+RPPK+     TP G R+
Sbjct: 64  SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 97


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 367 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 254
           +L +I+ +   K  G T +R+RPPK+     TP G R+
Sbjct: 378 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 411


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 367 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 254
           +L +I+ +   K  G T +R+RPPK+     TP G R+
Sbjct: 611 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 644


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 367 ALRAILPDDLQK*EGVTPLRLRPPKILVTVLTPTGERI 254
           +L +I+ +   K  G T +R+RPPK+     TP G R+
Sbjct: 611 SLASIIDEAATKVHGTT-VRVRPPKVYP---TPYGGRL 644


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 16  DPPVLQEFGTRHKARCVPL 72
           DPP+ +E G+    +C+ +
Sbjct: 47  DPPIKEESGSMANQKCLEI 65


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 16  DPPVLQEFGTRHKARCVPL 72
           DPP+ +E G+    +C+ +
Sbjct: 47  DPPIKEESGSMANQKCLEI 65


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 16  DPPVLQEFGTRHKARCVPL 72
           DPP+ +E G+    +C+ +
Sbjct: 47  DPPIKEESGSMANQKCLEI 65


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +1

Query: 16  DPPVLQEFGTRHKARCVPL 72
           DPP+ +E G+    +C+ +
Sbjct: 47  DPPIKEESGSMANQKCLEI 65


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 317 TIAFATTKNFSDSLNSNRRADIDVTQYSSTAYIKP 213
           T +  T  + SDS  S+   D ++   S+ +YIKP
Sbjct: 125 TASRETKSSESDSGASSADPDDELRSSSAFSYIKP 159


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 296 KNFSDSLNSNRRADIDVTQYSSTAY 222
           K  SDS N+N + + +  QY + A+
Sbjct: 456 KEESDSNNNNNKEEGNSCQYCNIAF 480


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -1

Query: 405 PSLPTSTLQELGELYEQYCQMI 340
           P+LP +++   G + ++ CQ++
Sbjct: 129 PTLPVTSIHLRGAIGQRSCQVV 150


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 156 LGKDSSFQWAXXLAPYDPDWFYVR 227
           L K+    W    A YDP+  YV+
Sbjct: 92  LYKNKQDWWKQLEAKYDPEHTYVK 115


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 55  PCASCRIPAAPG 20
           P  SC  PAAPG
Sbjct: 112 PLNSCSQPAAPG 123


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 55  PCASCRIPAAPG 20
           P  SC  PAAPG
Sbjct: 171 PLNSCSQPAAPG 182


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 55  PCASCRIPAAPG 20
           P  SC  PAAPG
Sbjct: 112 PLNSCSQPAAPG 123


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 55  PCASCRIPAAPG 20
           P  SC  PAAPG
Sbjct: 171 PLNSCSQPAAPG 182


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 327 SHFCRSSGSI 356
           +HFCR+ GS+
Sbjct: 312 THFCRTLGSL 321


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 128 IFQVTVQF*RFCLVHILHCNGT 63
           +F V + +  F L  +LHCN T
Sbjct: 138 LFFVILLWISFFLNFMLHCNNT 159


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 136 HFRSFK*RYSFDDFVLFT 83
           HF S    Y F++FV+ +
Sbjct: 21  HFLSITPNYDFENFVIIS 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,934
Number of Sequences: 336
Number of extensions: 1908
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)