Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_C04
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   130   6e-31
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   130   6e-31
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   130   6e-31
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   130   6e-31
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   130   6e-31
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   130   7e-31
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   109   1e-24
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   109   1e-24

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  130 bits (315), Expect = 6e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  130 bits (315), Expect = 6e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  130 bits (315), Expect = 6e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  130 bits (315), Expect = 6e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  130 bits (315), Expect = 6e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  130 bits (314), Expect = 7e-31
 Identities = 67/123 (54%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
 Frame = +3

Query: 60  MRSVTVKDVNK---TKSSKLYRHLKDRK*RFQSYGLGKDSSFQWAXXLAPYDPDWFYVRC 230
           M  VTVKD+++   TK+  ++     +        + K + F+    LAPYDPDWFYVRC
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFK---ELAPYDPDWFYVRC 57

Query: 231 AAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQ 410
           A+ILRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  
Sbjct: 58  ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHP 117

Query: 411 DGG 419
           DGG
Sbjct: 118 DGG 120


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  109 bits (262), Expect = 1e-24
 Identities = 48/75 (64%), Positives = 56/75 (74%)
 Frame = +3

Query: 195 APYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQ 374
           AP D DWFY RCA+I+RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQ
Sbjct: 46  APTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQ 105

Query: 375 ALEALKLVEKVQDGG 419
           ALEA  +VE+  DGG
Sbjct: 106 ALEAANMVERHPDGG 120


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  109 bits (262), Expect = 1e-24
 Identities = 48/75 (64%), Positives = 56/75 (74%)
 Frame = +3

Query: 195 APYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQ 374
           AP D DWFY RCA+I+RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQ
Sbjct: 46  APTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQ 105

Query: 375 ALEALKLVEKVQDGG 419
           ALEA  +VE+  DGG
Sbjct: 106 ALEAANMVERHPDGG 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,422,107
Number of Sequences: 53049
Number of extensions: 353365
Number of successful extensions: 858
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)